RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
CACNA1A-221ENST00000636012 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-221ENST00000636012 ARID4BQ4LE39 1312 aaPredicted RBP21.18■□□□□ 0.98
CACNA1A-221ENST00000636012 PRM3Q9NNZ6 103 aa21.17■□□□□ 0.98
CACNA1A-221ENST00000636012 CLSTN1O94985 981 aa21.17■□□□□ 0.98
CACNA1A-221ENST00000636012 TSPY4P0CV99 314 aa21.16■□□□□ 0.98
CACNA1A-221ENST00000636012 TSPY10P0CW01 314 aa21.16■□□□□ 0.98
CACNA1A-221ENST00000636012 IRX6P78412 446 aaPredicted RBP21.14■□□□□ 0.98
CACNA1A-221ENST00000636012 NPHP1O15259 732 aa21.13■□□□□ 0.97
CACNA1A-221ENST00000636012 KCNH8Q96L42 1107 aa21.13■□□□□ 0.97
CACNA1A-221ENST00000636012 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
CACNA1A-221ENST00000636012 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-221ENST00000636012 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-221ENST00000636012 DNTTIP2Q5QJE6 756 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-221ENST00000636012 MRS2Q9HD23 443 aa21.09■□□□□ 0.97
CACNA1A-221ENST00000636012 NCLP19338 710 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-221ENST00000636012 TNNT2P45379 298 aaPredicted RBP21.06■□□□□ 0.96
CACNA1A-221ENST00000636012 LMOD2Q6P5Q4 547 aa21.04■□□□□ 0.96
CACNA1A-221ENST00000636012 SENP3-EIF4A1A0A087X0R7 540 aa21.02■□□□□ 0.96
CACNA1A-221ENST00000636012 LAS1LQ9Y4W2 734 aaKnown RBP21.01■□□□□ 0.95
CACNA1A-221ENST00000636012 ZRSR1Q15695 479 aaKnown RBP21■□□□□ 0.95
CACNA1A-221ENST00000636012 TRIM44Q96DX7 344 aaPredicted RBP21■□□□□ 0.95
CACNA1A-221ENST00000636012 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
CACNA1A-221ENST00000636012 MTUS2Q5JR59 1369 aa20.99■□□□□ 0.95
CACNA1A-221ENST00000636012 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
CACNA1A-221ENST00000636012 FBXO3Q9UK99 471 aa20.96■□□□□ 0.95
CACNA1A-221ENST00000636012 RRP7BPQ9NSQ0 103 aa20.96■□□□□ 0.95
CACNA1A-221ENST00000636012 PTMAP06454 111 aaKnown RBP20.96■□□□□ 0.95
CACNA1A-221ENST00000636012 PLCB2Q00722 1185 aa20.94■□□□□ 0.94
CACNA1A-221ENST00000636012 BECN1Q14457 450 aa20.93■□□□□ 0.94
CACNA1A-221ENST00000636012 CASC1Q6TDU7 716 aa20.92■□□□□ 0.94
CACNA1A-221ENST00000636012 FTSJ3Q8IY81 847 aaKnown RBP20.9■□□□□ 0.94
CACNA1A-221ENST00000636012 PDE4CQ08493 712 aa20.89■□□□□ 0.93
CACNA1A-221ENST00000636012 RTN4Q9NQC3 1192 aaKnown RBP20.89■□□□□ 0.93
CACNA1A-221ENST00000636012 GOLGA6L22H0YM25 854 aa20.87■□□□□ 0.93
CACNA1A-221ENST00000636012 CFAP53Q96M91 514 aa20.85■□□□□ 0.93
CACNA1A-221ENST00000636012 EIF4G2P78344 907 aaKnown RBP eCLIP20.84■□□□□ 0.93
CACNA1A-221ENST00000636012 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
CACNA1A-221ENST00000636012 GOLGA2Q08379 1002 aa20.84■□□□□ 0.93
CACNA1A-221ENST00000636012 NAP1L2Q9ULW6 460 aaPredicted RBP20.84■□□□□ 0.93
CACNA1A-221ENST00000636012 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
CACNA1A-221ENST00000636012 OS9Q13438 667 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-221ENST00000636012 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
CACNA1A-221ENST00000636012 NAP1L5Q96NT1 182 aaPredicted RBP20.78■□□□□ 0.92
CACNA1A-221ENST00000636012 ERICH6BQ5W0A0 696 aa20.77■□□□□ 0.92
CACNA1A-221ENST00000636012 POGKQ9P215 609 aa20.77■□□□□ 0.92
CACNA1A-221ENST00000636012 FGD1P98174 961 aa20.77■□□□□ 0.91
CACNA1A-221ENST00000636012 TRHP20396 242 aaPredicted RBP20.75■□□□□ 0.91
CACNA1A-221ENST00000636012 PLEKHD1A6NEE1 506 aa20.75■□□□□ 0.91
CACNA1A-221ENST00000636012 ARID3AQ99856 593 aa20.75■□□□□ 0.91
CACNA1A-221ENST00000636012 ISY1Q9ULR0 285 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-221ENST00000636012 MAPK8IP3Q9UPT6 1336 aa20.73■□□□□ 0.91
CACNA1A-221ENST00000636012 SOX12O15370 315 aa20.72■□□□□ 0.91
CACNA1A-221ENST00000636012 KCNJ4P48050 445 aa20.71■□□□□ 0.91
CACNA1A-221ENST00000636012 MIER1Q8N108 512 aa20.68■□□□□ 0.9
CACNA1A-221ENST00000636012 FRAT1Q92837 279 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-221ENST00000636012 U2SURPO15042 1029 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-221ENST00000636012 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
CACNA1A-221ENST00000636012 ANP32EQ9BTT0 268 aa20.66■□□□□ 0.9
CACNA1A-221ENST00000636012 MLECQ14165 292 aa20.63■□□□□ 0.89
CACNA1A-221ENST00000636012 CARD11Q9BXL7 1154 aa20.63■□□□□ 0.89
CACNA1A-221ENST00000636012 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-221ENST00000636012 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
CACNA1A-221ENST00000636012 HSP90AB1P08238 724 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-221ENST00000636012 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-221ENST00000636012 KRI1Q8N9T8 703 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-221ENST00000636012 NOC3LQ8WTT2 800 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-221ENST00000636012 CFDP1Q9UEE9 299 aaPredicted RBP20.6■□□□□ 0.89
CACNA1A-221ENST00000636012 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
CACNA1A-221ENST00000636012 RGS3P49796 1198 aa20.59■□□□□ 0.89
CACNA1A-221ENST00000636012 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
CACNA1A-221ENST00000636012 GOLGA6L6A8MZA4 724 aa20.57■□□□□ 0.88
CACNA1A-221ENST00000636012 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-221ENST00000636012 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.56■□□□□ 0.88
CACNA1A-221ENST00000636012 CLIP1P30622 1438 aa20.54■□□□□ 0.88
CACNA1A-221ENST00000636012 SAFB2Q14151 953 aaKnown RBP eCLIP20.51■□□□□ 0.87
CACNA1A-221ENST00000636012 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-221ENST00000636012 GOLGA6L4A6NEF3 574 aa20.49■□□□□ 0.87
CACNA1A-221ENST00000636012 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-221ENST00000636012 DRC7Q8IY82 874 aa20.48■□□□□ 0.87
CACNA1A-221ENST00000636012 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
CACNA1A-221ENST00000636012 ZNF330Q9Y3S2 320 aaPredicted RBP20.47■□□□□ 0.87
CACNA1A-221ENST00000636012 GNL2Q13823 731 aaKnown RBP20.46■□□□□ 0.87
CACNA1A-221ENST00000636012 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
CACNA1A-221ENST00000636012 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
CACNA1A-221ENST00000636012 SPRYD3Q8NCJ5 442 aa20.45■□□□□ 0.86
CACNA1A-221ENST00000636012 A0A0U1RQG5 324 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-221ENST00000636012 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-221ENST00000636012 CHMP4BQ9H444 224 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-221ENST00000636012 NRDCO43847 1150 aa20.42■□□□□ 0.86
CACNA1A-221ENST00000636012 STK26Q9P289 416 aa20.42■□□□□ 0.86
CACNA1A-221ENST00000636012 EIF4G1Q04637 1599 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-221ENST00000636012 APBB1O00213 710 aa20.4■□□□□ 0.86
CACNA1A-221ENST00000636012 CCDC9Q9Y3X0 531 aaKnown RBP20.39■□□□□ 0.85
CACNA1A-221ENST00000636012 PATL2C9JE40 543 aaKnown RBP20.38■□□□□ 0.85
CACNA1A-221ENST00000636012 TMX4Q9H1E5 349 aaPredicted RBP20.38■□□□□ 0.85
CACNA1A-221ENST00000636012 HDGFP51858 240 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-221ENST00000636012 MCCP23508 829 aa20.37■□□□□ 0.85
CACNA1A-221ENST00000636012 KANK1Q14678 1352 aa20.36■□□□□ 0.85
CACNA1A-221ENST00000636012 MS4A1P11836 297 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms