RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.06
GABRB3-218ENST00000635994 EIF4G2P78344 907 aaKnown RBP eCLIP8.39□□□□□ -1.07
GABRB3-218ENST00000635994 NCLP19338 710 aaKnown RBP8.39□□□□□ -1.07
GABRB3-218ENST00000635994 LOC105371045A0A1W2PR82 267 aa8.38□□□□□ -1.07
GABRB3-218ENST00000635994 ARID3CA6NKF2 412 aa8.38□□□□□ -1.07
GABRB3-218ENST00000635994 P3H3Q8IVL6 736 aa8.38□□□□□ -1.07
GABRB3-218ENST00000635994 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
GABRB3-218ENST00000635994 WRNQ14191 1432 aaPredicted RBP eCLIP8.37□□□□□ -1.07
GABRB3-218ENST00000635994 ZRSR1Q15695 479 aaKnown RBP8.37□□□□□ -1.07
GABRB3-218ENST00000635994 CSRNP3Q8WYN3 585 aa8.37□□□□□ -1.07
GABRB3-218ENST00000635994 GLIPR1L2Q4G1C9 344 aa8.37□□□□□ -1.07
GABRB3-218ENST00000635994 ANP32EQ9BTT0 268 aa8.36□□□□□ -1.07
GABRB3-218ENST00000635994 NPHP1O15259 732 aa8.36□□□□□ -1.07
GABRB3-218ENST00000635994 CDCA8Q53HL2 280 aa8.36□□□□□ -1.07
GABRB3-218ENST00000635994 ABCC8Q09428 1581 aa8.36□□□□□ -1.07
GABRB3-218ENST00000635994 FANCD2Q9BXW9 1451 aa8.35□□□□□ -1.07
GABRB3-218ENST00000635994 CFAP53Q96M91 514 aa8.35□□□□□ -1.07
GABRB3-218ENST00000635994 ARID4BQ4LE39 1312 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-218ENST00000635994 DNAJC5BQ9UF47 199 aa8.34□□□□□ -1.07
GABRB3-218ENST00000635994 KIF27Q86VH2 1401 aa8.34□□□□□ -1.07
GABRB3-218ENST00000635994 WIZO95785 1651 aa8.34□□□□□ -1.07
GABRB3-218ENST00000635994 CCDC88BA6NC98 1476 aa8.34□□□□□ -1.07
GABRB3-218ENST00000635994 HDGFP51858 240 aaKnown RBP8.34□□□□□ -1.07
GABRB3-218ENST00000635994 OSCARQ8IYS5 282 aa8.34□□□□□ -1.07
GABRB3-218ENST00000635994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.33□□□□□ -1.08
GABRB3-218ENST00000635994 CHMP4BQ9H444 224 aaKnown RBP8.33□□□□□ -1.08
GABRB3-218ENST00000635994 TMC1Q8TDI8 760 aa8.33□□□□□ -1.08
GABRB3-218ENST00000635994 SOGA1O94964 1423 aa8.33□□□□□ -1.08
GABRB3-218ENST00000635994 ZBTB7CA1YPR0 619 aa8.33□□□□□ -1.08
GABRB3-218ENST00000635994 BICRAQ9NZM4 1560 aa8.32□□□□□ -1.08
GABRB3-218ENST00000635994 CASC1Q6TDU7 716 aa8.32□□□□□ -1.08
GABRB3-218ENST00000635994 GOLGA6L22H0YM25 854 aa8.32□□□□□ -1.08
GABRB3-218ENST00000635994 HMGXB3Q12766 1538 aa8.31□□□□□ -1.08
GABRB3-218ENST00000635994 MRC2Q9UBG0 1479 aa8.3□□□□□ -1.08
GABRB3-218ENST00000635994 PLEKHD1A6NEE1 506 aa8.29□□□□□ -1.08
GABRB3-218ENST00000635994 ARXQ96QS3 562 aa8.29□□□□□ -1.08
GABRB3-218ENST00000635994 CUX2O14529 1486 aa8.28□□□□□ -1.08
GABRB3-218ENST00000635994 BECN1Q14457 450 aa8.28□□□□□ -1.08
GABRB3-218ENST00000635994 GOLGA2Q08379 1002 aa8.28□□□□□ -1.08
GABRB3-218ENST00000635994 PNNQ9H307 717 aaKnown RBP8.27□□□□□ -1.09
GABRB3-218ENST00000635994 UNC13AQ9UPW8 1703 aa8.27□□□□□ -1.09
GABRB3-218ENST00000635994 NRDCO43847 1150 aa8.27□□□□□ -1.09
GABRB3-218ENST00000635994 L1TD1Q5T7N2 865 aaKnown RBP8.27□□□□□ -1.09
GABRB3-218ENST00000635994 TMX4Q9H1E5 349 aaPredicted RBP8.26□□□□□ -1.09
GABRB3-218ENST00000635994 NUDCQ9Y266 331 aa8.26□□□□□ -1.09
GABRB3-218ENST00000635994 MTUS2Q5JR59 1369 aa8.26□□□□□ -1.09
GABRB3-218ENST00000635994 GOLGA6L6A8MZA4 724 aa8.26□□□□□ -1.09
GABRB3-218ENST00000635994 KCNH8Q96L42 1107 aa8.26□□□□□ -1.09
GABRB3-218ENST00000635994 CARMIL2Q6F5E8 1435 aa8.26□□□□□ -1.09
GABRB3-218ENST00000635994 MS4A1P11836 297 aa8.24□□□□□ -1.09
GABRB3-218ENST00000635994 CCDC136Q96JN2 1154 aa8.24□□□□□ -1.09
GABRB3-218ENST00000635994 CHMP4AQ9BY43 222 aa8.24□□□□□ -1.09
GABRB3-218ENST00000635994 TDRD9Q8NDG6 1382 aaKnown RBP8.24□□□□□ -1.09
GABRB3-218ENST00000635994 HNRNPUQ00839 825 aaKnown RBP eCLIP8.23□□□□□ -1.09
GABRB3-218ENST00000635994 TRIM44Q96DX7 344 aaPredicted RBP8.23□□□□□ -1.09
GABRB3-218ENST00000635994 DDRGK1Q96HY6 314 aa8.23□□□□□ -1.09
GABRB3-218ENST00000635994 EEA1Q15075 1411 aa8.22□□□□□ -1.09
GABRB3-218ENST00000635994 MAPK8IP3Q9UPT6 1336 aa8.22□□□□□ -1.09
GABRB3-218ENST00000635994 LAMC3Q9Y6N6 1575 aa8.22□□□□□ -1.09
GABRB3-218ENST00000635994 AEBP2Q6ZN18 517 aaPredicted RBP8.22□□□□□ -1.09
GABRB3-218ENST00000635994 CFAP44Q96MT7 982 aa8.21□□□□□ -1.09
GABRB3-218ENST00000635994 LMOD2Q6P5Q4 547 aa8.21□□□□□ -1.1
GABRB3-218ENST00000635994 FAM9BQ8IZU0 186 aa8.21□□□□□ -1.1
GABRB3-218ENST00000635994 POGKQ9P215 609 aa8.2□□□□□ -1.1
GABRB3-218ENST00000635994 IFT140Q96RY7 1462 aa8.2□□□□□ -1.1
GABRB3-218ENST00000635994 NESP48681 1621 aa8.2□□□□□ -1.1
GABRB3-218ENST00000635994 TNNT2P45379 298 aaPredicted RBP8.2□□□□□ -1.1
GABRB3-218ENST00000635994 KDM2AQ9Y2K7 1162 aa8.2□□□□□ -1.1
GABRB3-218ENST00000635994 CARMIL1Q5VZK9 1371 aa8.19□□□□□ -1.1
GABRB3-218ENST00000635994 FGD1P98174 961 aa8.19□□□□□ -1.1
GABRB3-218ENST00000635994 MRS2Q9HD23 443 aa8.18□□□□□ -1.1
GABRB3-218ENST00000635994 KNSTRNQ9Y448 316 aa8.18□□□□□ -1.1
GABRB3-218ENST00000635994 CYB5RLQ6IPT4 315 aa8.18□□□□□ -1.1
GABRB3-218ENST00000635994 PLEKHG5O94827 1062 aa8.18□□□□□ -1.1
GABRB3-218ENST00000635994 TULP1O00294 542 aaPredicted RBP8.17□□□□□ -1.1
GABRB3-218ENST00000635994 CHIC2Q9UKJ5 165 aa8.17□□□□□ -1.1
GABRB3-218ENST00000635994 OS9Q13438 667 aaPredicted RBP8.17□□□□□ -1.1
GABRB3-218ENST00000635994 KANK1Q14678 1352 aa8.17□□□□□ -1.1
GABRB3-218ENST00000635994 GTF3C3Q9Y5Q9 886 aa8.17□□□□□ -1.1
GABRB3-218ENST00000635994 FTSJ3Q8IY81 847 aaKnown RBP8.16□□□□□ -1.1
GABRB3-218ENST00000635994 CHAF1AQ13111 956 aaPredicted RBP8.16□□□□□ -1.1
GABRB3-218ENST00000635994 PTMAP06454 111 aaKnown RBP8.16□□□□□ -1.1
GABRB3-218ENST00000635994 CLSTN1O94985 981 aa8.15□□□□□ -1.1
GABRB3-218ENST00000635994 SALL2Q9Y467 1007 aaPredicted RBP8.15□□□□□ -1.1
GABRB3-218ENST00000635994 HDAC5Q9UQL6 1122 aa8.15□□□□□ -1.11
GABRB3-218ENST00000635994 GOLGA3Q08378 1498 aa8.15□□□□□ -1.11
GABRB3-218ENST00000635994 KCNJ4P48050 445 aa8.14□□□□□ -1.11
GABRB3-218ENST00000635994 CFTRP13569 1480 aa8.14□□□□□ -1.11
GABRB3-218ENST00000635994 KIAA2012Q0VF49 1180 aa8.13□□□□□ -1.11
GABRB3-218ENST00000635994 FGD5Q6ZNL6 1462 aa8.13□□□□□ -1.11
GABRB3-218ENST00000635994 FKBP8Q14318 412 aa8.13□□□□□ -1.11
GABRB3-218ENST00000635994 CFDP1Q9UEE9 299 aaPredicted RBP8.13□□□□□ -1.11
GABRB3-218ENST00000635994 GAPVD1Q14C86 1478 aa8.12□□□□□ -1.11
GABRB3-218ENST00000635994 CLIP1P30622 1438 aa8.12□□□□□ -1.11
GABRB3-218ENST00000635994 PPM1GO15355 546 aaPredicted RBP8.12□□□□□ -1.11
GABRB3-218ENST00000635994 CCDC34Q96HJ3 373 aa8.12□□□□□ -1.11
GABRB3-218ENST00000635994 MCCP23508 829 aa8.12□□□□□ -1.11
GABRB3-218ENST00000635994 ISY1Q9ULR0 285 aaKnown RBP8.11□□□□□ -1.11
GABRB3-218ENST00000635994 GOLGA6L4A6NEF3 574 aa8.11□□□□□ -1.11
GABRB3-218ENST00000635994 DDX10Q13206 875 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms