RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
CRNDE-213ENST00000635991 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
CRNDE-213ENST00000635991 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
CRNDE-213ENST00000635991 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
CRNDE-213ENST00000635991 HS6ST3Q8IZP7 471 aa11.76□□□□□ -0.53
CRNDE-213ENST00000635991 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
CRNDE-213ENST00000635991 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
CRNDE-213ENST00000635991 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
CRNDE-213ENST00000635991 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
CRNDE-213ENST00000635991 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
CRNDE-213ENST00000635991 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
CRNDE-213ENST00000635991 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
CRNDE-213ENST00000635991 SPRYD3Q8NCJ5 442 aa11.69□□□□□ -0.54
CRNDE-213ENST00000635991 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
CRNDE-213ENST00000635991 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
CRNDE-213ENST00000635991 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
CRNDE-213ENST00000635991 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
CRNDE-213ENST00000635991 PYGBP11216 843 aa11.64□□□□□ -0.55
CRNDE-213ENST00000635991 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
CRNDE-213ENST00000635991 STK25O00506 426 aa11.6□□□□□ -0.55
CRNDE-213ENST00000635991 ZNF467Q7Z7K2 595 aaPredicted RBP11.59□□□□□ -0.55
CRNDE-213ENST00000635991 PIP4P2Q8N4L2 257 aa11.58□□□□□ -0.56
CRNDE-213ENST00000635991 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
CRNDE-213ENST00000635991 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
CRNDE-213ENST00000635991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
CRNDE-213ENST00000635991 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
CRNDE-213ENST00000635991 BCL11BQ9C0K0 894 aaPredicted RBP11.53□□□□□ -0.56
CRNDE-213ENST00000635991 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
CRNDE-213ENST00000635991 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
CRNDE-213ENST00000635991 STK24Q9Y6E0 443 aa11.52□□□□□ -0.57
CRNDE-213ENST00000635991 PDAP1Q13442 181 aaKnown RBP11.49□□□□□ -0.57
CRNDE-213ENST00000635991 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
CRNDE-213ENST00000635991 TSHZ2Q9NRE2 1034 aa11.48□□□□□ -0.57
CRNDE-213ENST00000635991 GTPBP6O43824 516 aaPredicted RBP11.47□□□□□ -0.57
CRNDE-213ENST00000635991 KDM2AQ9Y2K7 1162 aa11.46□□□□□ -0.57
CRNDE-213ENST00000635991 BCANQ96GW7 911 aa11.44□□□□□ -0.58
CRNDE-213ENST00000635991 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
CRNDE-213ENST00000635991 PCDHB13Q9Y5F0 798 aa11.42□□□□□ -0.58
CRNDE-213ENST00000635991 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
CRNDE-213ENST00000635991 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
CRNDE-213ENST00000635991 PSEN1P49768 467 aa11.4□□□□□ -0.58
CRNDE-213ENST00000635991 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
CRNDE-213ENST00000635991 MAP3K13O43283 966 aa11.37□□□□□ -0.59
CRNDE-213ENST00000635991 IFNL1Q8IU54 200 aa11.37□□□□□ -0.59
CRNDE-213ENST00000635991 C19orf67A6NJJ6 358 aa11.3□□□□□ -0.6
CRNDE-213ENST00000635991 PHF12Q96QT6 1004 aa11.28□□□□□ -0.6
CRNDE-213ENST00000635991 MFRPQ9BY79 579 aa11.26□□□□□ -0.61
CRNDE-213ENST00000635991 SOX12O15370 315 aa11.25□□□□□ -0.61
CRNDE-213ENST00000635991 CABP2Q9NPB3 220 aa11.24□□□□□ -0.61
CRNDE-213ENST00000635991 NLRP6P59044 892 aa11.23□□□□□ -0.61
CRNDE-213ENST00000635991 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
CRNDE-213ENST00000635991 CLCN6P51797 869 aa11.19□□□□□ -0.62
CRNDE-213ENST00000635991 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
CRNDE-213ENST00000635991 MS4A3Q96HJ5 214 aa11.19□□□□□ -0.62
CRNDE-213ENST00000635991 NBR1Q14596 966 aa11.17□□□□□ -0.62
CRNDE-213ENST00000635991 GOLGA2Q08379 1002 aa11.16□□□□□ -0.62
CRNDE-213ENST00000635991 TMEM106CQ9BVX2 250 aa11.16□□□□□ -0.62
CRNDE-213ENST00000635991 TIE1P35590 1138 aa11.15□□□□□ -0.62
CRNDE-213ENST00000635991 PHF8Q9UPP1 1060 aa11.14□□□□□ -0.63
CRNDE-213ENST00000635991 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
CRNDE-213ENST00000635991 WDR70Q9NW82 654 aa11.1□□□□□ -0.63
CRNDE-213ENST00000635991 TRPC6Q9Y210 931 aa11.1□□□□□ -0.63
CRNDE-213ENST00000635991 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
CRNDE-213ENST00000635991 CADPS2Q86UW7 1296 aa11.09□□□□□ -0.63
CRNDE-213ENST00000635991 HAX1O00165 279 aa11.08□□□□□ -0.64
CRNDE-213ENST00000635991 PPP1R37O75864 691 aa11.08□□□□□ -0.64
CRNDE-213ENST00000635991 TTLL13PA6NNM8 815 aa11.07□□□□□ -0.64
CRNDE-213ENST00000635991 MS4A4AQ96JQ5 239 aa11.05□□□□□ -0.64
CRNDE-213ENST00000635991 BMP2KQ9NSY1 1161 aaPredicted RBP11.04□□□□□ -0.64
CRNDE-213ENST00000635991 ILDR1Q86SU0 546 aaPredicted RBP11.03□□□□□ -0.64
CRNDE-213ENST00000635991 GALR2O43603 387 aaPredicted RBP11.02□□□□□ -0.65
CRNDE-213ENST00000635991 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
CRNDE-213ENST00000635991 KCNV2Q8TDN2 545 aa10.98□□□□□ -0.65
CRNDE-213ENST00000635991 TPRNQ4KMQ1 711 aa10.97□□□□□ -0.65
CRNDE-213ENST00000635991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.65
CRNDE-213ENST00000635991 PDE4AP27815 886 aa10.96□□□□□ -0.65
CRNDE-213ENST00000635991 EVX2Q03828 476 aa10.96□□□□□ -0.65
CRNDE-213ENST00000635991 NCKAP5LQ9HCH0 1330 aa10.94□□□□□ -0.66
CRNDE-213ENST00000635991 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
CRNDE-213ENST00000635991 CRISPLD2Q9H0B8 497 aa10.94□□□□□ -0.66
CRNDE-213ENST00000635991 MFSD10Q14728 455 aa10.93□□□□□ -0.66
CRNDE-213ENST00000635991 E2F4Q16254 413 aa10.93□□□□□ -0.66
CRNDE-213ENST00000635991 IER5LQ5T953 404 aa10.93□□□□□ -0.66
CRNDE-213ENST00000635991 ASTLQ6HA08 431 aaPredicted RBP10.93□□□□□ -0.66
CRNDE-213ENST00000635991 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
CRNDE-213ENST00000635991 ATMINO43313 823 aaPredicted RBP10.91□□□□□ -0.66
CRNDE-213ENST00000635991 ATN1P54259 1190 aaPredicted RBP10.9□□□□□ -0.66
CRNDE-213ENST00000635991 DDX27Q96GQ7 796 aaKnown RBP10.89□□□□□ -0.67
CRNDE-213ENST00000635991 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
CRNDE-213ENST00000635991 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
CRNDE-213ENST00000635991 IRX5P78411 483 aaPredicted RBP10.86□□□□□ -0.67
CRNDE-213ENST00000635991 OCEL1Q9H607 264 aa10.86□□□□□ -0.67
CRNDE-213ENST00000635991 ARIH1Q9Y4X5 557 aaPredicted RBP10.85□□□□□ -0.67
CRNDE-213ENST00000635991 GABBR2O75899 941 aa10.84□□□□□ -0.67
CRNDE-213ENST00000635991 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
CRNDE-213ENST00000635991 CAMK2BQ13554 666 aa10.83□□□□□ -0.68
CRNDE-213ENST00000635991 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
CRNDE-213ENST00000635991 GPHNQ9NQX3 736 aaPredicted RBP10.83□□□□□ -0.68
CRNDE-213ENST00000635991 POTEHQ6S545 545 aa10.82□□□□□ -0.68
CRNDE-213ENST00000635991 DPY19L2Q6NUT2 758 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms