RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 HS6ST3Q8IZP7 471 aa14.09□□□□□ -0.15
SMARCA2-244ENST00000635659 NBR1Q14596 966 aa13.99□□□□□ -0.17
SMARCA2-244ENST00000635659 GSE1Q14687 1217 aa13.99□□□□□ -0.17
SMARCA2-244ENST00000635659 RNF25Q96BH1 459 aaPredicted RBP13.96□□□□□ -0.17
SMARCA2-244ENST00000635659 NUBP1P53384 320 aa13.89□□□□□ -0.19
SMARCA2-244ENST00000635659 RIOK3O14730 519 aaKnown RBP13.87□□□□□ -0.19
SMARCA2-244ENST00000635659 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
SMARCA2-244ENST00000635659 GTPBP6O43824 516 aaPredicted RBP13.81□□□□□ -0.2
SMARCA2-244ENST00000635659 DCAF8Q5TAQ9 597 aa13.8□□□□□ -0.2
SMARCA2-244ENST00000635659 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
SMARCA2-244ENST00000635659 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
SMARCA2-244ENST00000635659 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
SMARCA2-244ENST00000635659 STK25O00506 426 aa13.75□□□□□ -0.21
SMARCA2-244ENST00000635659 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
SMARCA2-244ENST00000635659 NACADO15069 1562 aa13.73□□□□□ -0.21
SMARCA2-244ENST00000635659 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
SMARCA2-244ENST00000635659 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
SMARCA2-244ENST00000635659 RYDENQ9NUL5 291 aaKnown RBP13.68□□□□□ -0.22
SMARCA2-244ENST00000635659 CREBZFQ9NS37 354 aa13.67□□□□□ -0.22
SMARCA2-244ENST00000635659 MNX1P50219 401 aaPredicted RBP13.66□□□□□ -0.22
SMARCA2-244ENST00000635659 UNC13AQ9UPW8 1703 aa13.63□□□□□ -0.23
SMARCA2-244ENST00000635659 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
SMARCA2-244ENST00000635659 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
SMARCA2-244ENST00000635659 BCL11BQ9C0K0 894 aaPredicted RBP13.62□□□□□ -0.23
SMARCA2-244ENST00000635659 STK24Q9Y6E0 443 aa13.61□□□□□ -0.23
SMARCA2-244ENST00000635659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
SMARCA2-244ENST00000635659 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
SMARCA2-244ENST00000635659 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
SMARCA2-244ENST00000635659 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
SMARCA2-244ENST00000635659 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
SMARCA2-244ENST00000635659 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
SMARCA2-244ENST00000635659 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
SMARCA2-244ENST00000635659 P3H3Q8IVL6 736 aa13.55□□□□□ -0.24
SMARCA2-244ENST00000635659 DCAF1Q9Y4B6 1507 aa13.52□□□□□ -0.25
SMARCA2-244ENST00000635659 PYGBP11216 843 aa13.5□□□□□ -0.25
SMARCA2-244ENST00000635659 TIMELESSQ9UNS1 1208 aa13.5□□□□□ -0.25
SMARCA2-244ENST00000635659 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
SMARCA2-244ENST00000635659 TULP1O00294 542 aaPredicted RBP13.46□□□□□ -0.25
SMARCA2-244ENST00000635659 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
SMARCA2-244ENST00000635659 BICRAQ9NZM4 1560 aa13.44□□□□□ -0.26
SMARCA2-244ENST00000635659 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
SMARCA2-244ENST00000635659 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
SMARCA2-244ENST00000635659 POTEHQ6S545 545 aa13.41□□□□□ -0.26
SMARCA2-244ENST00000635659 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
SMARCA2-244ENST00000635659 KCNV2Q8TDN2 545 aa13.38□□□□□ -0.27
SMARCA2-244ENST00000635659 WDR70Q9NW82 654 aa13.38□□□□□ -0.27
SMARCA2-244ENST00000635659 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
SMARCA2-244ENST00000635659 PDAP1Q13442 181 aaKnown RBP13.33□□□□□ -0.28
SMARCA2-244ENST00000635659 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.28
SMARCA2-244ENST00000635659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMARCA2-244ENST00000635659 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
SMARCA2-244ENST00000635659 SCRIBQ14160 1630 aa13.3□□□□□ -0.28
SMARCA2-244ENST00000635659 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
SMARCA2-244ENST00000635659 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
SMARCA2-244ENST00000635659 TSPYL2Q9H2G4 693 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-244ENST00000635659 ARHGEF1Q92888 912 aaKnown RBP13.2□□□□□ -0.3
SMARCA2-244ENST00000635659 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
SMARCA2-244ENST00000635659 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
SMARCA2-244ENST00000635659 PSEN1P49768 467 aa13.19□□□□□ -0.3
SMARCA2-244ENST00000635659 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
SMARCA2-244ENST00000635659 ARXQ96QS3 562 aa13.16□□□□□ -0.3
SMARCA2-244ENST00000635659 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
SMARCA2-244ENST00000635659 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
SMARCA2-244ENST00000635659 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
SMARCA2-244ENST00000635659 BRPF1P55201 1214 aaPredicted RBP13.14□□□□□ -0.31
SMARCA2-244ENST00000635659 E2F4Q16254 413 aa13.13□□□□□ -0.31
SMARCA2-244ENST00000635659 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
SMARCA2-244ENST00000635659 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
SMARCA2-244ENST00000635659 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
SMARCA2-244ENST00000635659 NLRP6P59044 892 aa13.1□□□□□ -0.31
SMARCA2-244ENST00000635659 FBXO22Q8NEZ5 403 aa13.1□□□□□ -0.31
SMARCA2-244ENST00000635659 PPP1R37O75864 691 aa13.09□□□□□ -0.31
SMARCA2-244ENST00000635659 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-244ENST00000635659 SOX12O15370 315 aa13.07□□□□□ -0.32
SMARCA2-244ENST00000635659 EFCAB3Q8N7B9 438 aa13.05□□□□□ -0.32
SMARCA2-244ENST00000635659 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
SMARCA2-244ENST00000635659 SEMA3EO15041 775 aa13.04□□□□□ -0.32
SMARCA2-244ENST00000635659 CC2D2AQ9P2K1 1620 aa13.03□□□□□ -0.32
SMARCA2-244ENST00000635659 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
SMARCA2-244ENST00000635659 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
SMARCA2-244ENST00000635659 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
SMARCA2-244ENST00000635659 NEUROD2Q15784 382 aa13□□□□□ -0.33
SMARCA2-244ENST00000635659 SLC24A3Q9HC58 644 aa13□□□□□ -0.33
SMARCA2-244ENST00000635659 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-244ENST00000635659 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
SMARCA2-244ENST00000635659 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
SMARCA2-244ENST00000635659 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
SMARCA2-244ENST00000635659 MAP3K13O43283 966 aa12.95□□□□□ -0.34
SMARCA2-244ENST00000635659 MFSD10Q14728 455 aa12.95□□□□□ -0.34
SMARCA2-244ENST00000635659 ARIH1Q9Y4X5 557 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-244ENST00000635659 ZMYND10O75800 440 aa12.94□□□□□ -0.34
SMARCA2-244ENST00000635659 PDE4AP27815 886 aa12.94□□□□□ -0.34
SMARCA2-244ENST00000635659 KIF12Q96FN5 646 aa12.94□□□□□ -0.34
SMARCA2-244ENST00000635659 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-244ENST00000635659 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
SMARCA2-244ENST00000635659 HOMEZQ8IX15 550 aa12.9□□□□□ -0.34
SMARCA2-244ENST00000635659 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.34
SMARCA2-244ENST00000635659 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
SMARCA2-244ENST00000635659 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMARCA2-244ENST00000635659 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms