RNA–Protein interactions for RNA: ENST00000635048.1

LINC01748-204, Transcript of long intergenic non-protein coding RNA 1748, humanhuman

TSL 5 BASIC

Gene LINC01748, Length 5,678 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01748-204ENST00000635048 TDRD9Q8NDG6 1382 aaKnown RBP6.97□□□□□ -1.29
LINC01748-204ENST00000635048 CANXP27824 592 aaKnown RBP6.97□□□□□ -1.29
LINC01748-204ENST00000635048 PHF23Q9BUL5 403 aaPredicted RBP6.97□□□□□ -1.29
LINC01748-204ENST00000635048 POGKQ9P215 609 aa6.97□□□□□ -1.29
LINC01748-204ENST00000635048 RGL3Q3MIN7 710 aa6.96□□□□□ -1.3
LINC01748-204ENST00000635048 WRNQ14191 1432 aaPredicted RBP eCLIP6.96□□□□□ -1.3
LINC01748-204ENST00000635048 EFCAB2Q5VUJ9 269 aa6.95□□□□□ -1.3
LINC01748-204ENST00000635048 FAM69CQ0P6D2 419 aa6.95□□□□□ -1.3
LINC01748-204ENST00000635048 RSF1Q96T23 1441 aaPredicted RBP6.95□□□□□ -1.3
LINC01748-204ENST00000635048 TMC1Q8TDI8 760 aa6.94□□□□□ -1.3
LINC01748-204ENST00000635048 RRP7BPQ9NSQ0 103 aa6.94□□□□□ -1.3
LINC01748-204ENST00000635048 EID1Q9Y6B2 187 aa6.93□□□□□ -1.3
LINC01748-204ENST00000635048 JPH4Q96JJ6 628 aa6.92□□□□□ -1.3
LINC01748-204ENST00000635048 DCAF8L1A6NGE4 600 aa6.92□□□□□ -1.3
LINC01748-204ENST00000635048 TONSLQ96HA7 1378 aa6.91□□□□□ -1.3
LINC01748-204ENST00000635048 SOGA1O94964 1423 aa6.91□□□□□ -1.3
LINC01748-204ENST00000635048 KANK1Q14678 1352 aa6.91□□□□□ -1.3
LINC01748-204ENST00000635048 CADPSQ9ULU8 1353 aa6.91□□□□□ -1.3
LINC01748-204ENST00000635048 CUX2O14529 1486 aa6.91□□□□□ -1.3
LINC01748-204ENST00000635048 EIF4G1Q04637 1599 aaKnown RBP6.91□□□□□ -1.3
LINC01748-204ENST00000635048 BAZ1AQ9NRL2 1556 aaPredicted RBP6.9□□□□□ -1.3
LINC01748-204ENST00000635048 CARMIL1Q5VZK9 1371 aa6.89□□□□□ -1.31
LINC01748-204ENST00000635048 PPM1GO15355 546 aaPredicted RBP6.89□□□□□ -1.31
LINC01748-204ENST00000635048 ANP32CO43423 234 aa6.89□□□□□ -1.31
LINC01748-204ENST00000635048 CCNB3Q8WWL7 1395 aa6.88□□□□□ -1.31
LINC01748-204ENST00000635048 MEX3CQ5U5Q3 659 aaKnown RBP6.88□□□□□ -1.31
LINC01748-204ENST00000635048 SMARCA2P51531 1590 aa6.87□□□□□ -1.31
LINC01748-204ENST00000635048 CSB-PGBD3P0DP91 1061 aa6.87□□□□□ -1.31
LINC01748-204ENST00000635048 SOX12O15370 315 aa6.87□□□□□ -1.31
LINC01748-204ENST00000635048 CLIP1P30622 1438 aa6.86□□□□□ -1.31
LINC01748-204ENST00000635048 CEP164Q9UPV0 1460 aa6.86□□□□□ -1.31
LINC01748-204ENST00000635048 PAK3O75914 559 aaPredicted RBP6.86□□□□□ -1.31
LINC01748-204ENST00000635048 KIF3BO15066 747 aa6.85□□□□□ -1.31
LINC01748-204ENST00000635048 WASHC2CQ9Y4E1 1318 aa6.84□□□□□ -1.31
LINC01748-204ENST00000635048 ACIN1Q9UKV3 1341 aaKnown RBP6.83□□□□□ -1.32
LINC01748-204ENST00000635048 DNAJC5BQ9UF47 199 aa6.83□□□□□ -1.32
LINC01748-204ENST00000635048 SAFB2Q14151 953 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC01748-204ENST00000635048 PTPRGP23470 1445 aa6.83□□□□□ -1.32
LINC01748-204ENST00000635048 CDCA8Q53HL2 280 aa6.83□□□□□ -1.32
LINC01748-204ENST00000635048 STK26Q9P289 416 aa6.83□□□□□ -1.32
LINC01748-204ENST00000635048 SPAG9O60271 1321 aaKnown RBP6.83□□□□□ -1.32
LINC01748-204ENST00000635048 ZNF316A6NFI3 1004 aaPredicted RBP6.82□□□□□ -1.32
LINC01748-204ENST00000635048 FOXD1Q16676 465 aa6.82□□□□□ -1.32
LINC01748-204ENST00000635048 SRPK2P78362 688 aaKnown RBP6.81□□□□□ -1.32
LINC01748-204ENST00000635048 WDR43Q15061 677 aaKnown RBP eCLIP6.81□□□□□ -1.32
LINC01748-204ENST00000635048 EEA1Q15075 1411 aa6.81□□□□□ -1.32
LINC01748-204ENST00000635048 CFAP53Q96M91 514 aa6.81□□□□□ -1.32
LINC01748-204ENST00000635048 TMX4Q9H1E5 349 aaPredicted RBP6.8□□□□□ -1.32
LINC01748-204ENST00000635048 EIF4G2P78344 907 aaKnown RBP eCLIP6.79□□□□□ -1.32
LINC01748-204ENST00000635048 NGDNQ8NEJ9 315 aaKnown RBP6.78□□□□□ -1.32
LINC01748-204ENST00000635048 MSH5O43196 834 aa6.78□□□□□ -1.32
LINC01748-204ENST00000635048 SF3B2Q13435 895 aaKnown RBP6.78□□□□□ -1.32
LINC01748-204ENST00000635048 SALL2Q9Y467 1007 aaPredicted RBP6.78□□□□□ -1.32
LINC01748-204ENST00000635048 FANCD2Q9BXW9 1451 aa6.77□□□□□ -1.33
LINC01748-204ENST00000635048 HRCP23327 699 aa6.77□□□□□ -1.33
LINC01748-204ENST00000635048 KLHL34Q8N239 644 aa6.77□□□□□ -1.33
LINC01748-204ENST00000635048 FHAD1B1AJZ9 1412 aa6.77□□□□□ -1.33
LINC01748-204ENST00000635048 NUTM2FA1L443 756 aa6.76□□□□□ -1.33
LINC01748-204ENST00000635048 ZNF330Q9Y3S2 320 aaPredicted RBP6.76□□□□□ -1.33
LINC01748-204ENST00000635048 NUDCQ9Y266 331 aa6.76□□□□□ -1.33
LINC01748-204ENST00000635048 ATAD2BQ9ULI0 1458 aa6.75□□□□□ -1.33
LINC01748-204ENST00000635048 ATF3P18847 181 aa6.75□□□□□ -1.33
LINC01748-204ENST00000635048 EVA1CP58658 441 aa6.75□□□□□ -1.33
LINC01748-204ENST00000635048 KNSTRNQ9Y448 316 aa6.75□□□□□ -1.33
LINC01748-204ENST00000635048 GOLGA3Q08378 1498 aa6.75□□□□□ -1.33
LINC01748-204ENST00000635048 RSPH4AQ5TD94 716 aa6.75□□□□□ -1.33
LINC01748-204ENST00000635048 CARD11Q9BXL7 1154 aa6.74□□□□□ -1.33
LINC01748-204ENST00000635048 GOLGA2Q08379 1002 aa6.74□□□□□ -1.33
LINC01748-204ENST00000635048 ABCC8Q09428 1581 aa6.74□□□□□ -1.33
LINC01748-204ENST00000635048 HNRNPMP52272 730 aaKnown RBP eCLIP6.74□□□□□ -1.33
LINC01748-204ENST00000635048 PIP4K2BP78356 416 aa6.73□□□□□ -1.33
LINC01748-204ENST00000635048 TNNT2P45379 298 aaPredicted RBP6.73□□□□□ -1.33
LINC01748-204ENST00000635048 MAPK8IP3Q9UPT6 1336 aa6.73□□□□□ -1.33
LINC01748-204ENST00000635048 NUTM2DQ5VT03 806 aaPredicted RBP6.73□□□□□ -1.33
LINC01748-204ENST00000635048 HDGFL2Q7Z4V5 671 aaPredicted RBP6.72□□□□□ -1.33
LINC01748-204ENST00000635048 UNC13AQ9UPW8 1703 aa6.72□□□□□ -1.33
LINC01748-204ENST00000635048 MYH16Q9H6N6 1097 aa6.72□□□□□ -1.33
LINC01748-204ENST00000635048 GTF2E1P29083 439 aaPredicted RBP6.72□□□□□ -1.33
LINC01748-204ENST00000635048 DCAF11Q8TEB1 546 aa6.72□□□□□ -1.33
LINC01748-204ENST00000635048 U2SURPO15042 1029 aaKnown RBP6.71□□□□□ -1.33
LINC01748-204ENST00000635048 G3V3G9 751 aa6.7□□□□□ -1.34
LINC01748-204ENST00000635048 DCAF8Q5TAQ9 597 aa6.7□□□□□ -1.34
LINC01748-204ENST00000635048 PROSER2Q86WR7 435 aaPredicted RBP6.7□□□□□ -1.34
LINC01748-204ENST00000635048 LAS1LQ9Y4W2 734 aaKnown RBP6.7□□□□□ -1.34
LINC01748-204ENST00000635048 DIEXFQ68CQ4 756 aaKnown RBP6.7□□□□□ -1.34
LINC01748-204ENST00000635048 FAM9BQ8IZU0 186 aa6.69□□□□□ -1.34
LINC01748-204ENST00000635048 FMN1Q68DA7 1419 aa6.69□□□□□ -1.34
LINC01748-204ENST00000635048 CCDC88BA6NC98 1476 aa6.68□□□□□ -1.34
LINC01748-204ENST00000635048 MROH2BQ7Z745 1585 aa6.68□□□□□ -1.34
LINC01748-204ENST00000635048 PKD2Q13563 968 aa6.68□□□□□ -1.34
LINC01748-204ENST00000635048 NEUROD2Q15784 382 aa6.68□□□□□ -1.34
LINC01748-204ENST00000635048 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.68□□□□□ -1.34
LINC01748-204ENST00000635048 RTF1Q92541 710 aaKnown RBP6.68□□□□□ -1.34
LINC01748-204ENST00000635048 NUP155O75694 1391 aa6.68□□□□□ -1.34
LINC01748-204ENST00000635048 NUTM2BA6NNL0 878 aaPredicted RBP6.67□□□□□ -1.34
LINC01748-204ENST00000635048 NUTM2EB1AL46 878 aaPredicted RBP6.67□□□□□ -1.34
LINC01748-204ENST00000635048 NUTM2AQ8IVF1 878 aaPredicted RBP6.67□□□□□ -1.34
LINC01748-204ENST00000635048 ANKRD30AQ9BXX3 1397 aa6.67□□□□□ -1.34
LINC01748-204ENST00000635048 LTV1Q96GA3 475 aaPredicted RBP6.67□□□□□ -1.34
LINC01748-204ENST00000635048 DMRT2Q9Y5R5 561 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms