RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	ECM2	O94769	699 aa	Predicted RBP	13.06	□□□□□ -0.32
SMARCA2-223	ENST00000634435	EVX2	Q03828	476 aa		13.02	□□□□□ -0.33
SMARCA2-223	ENST00000634435	MIER1	Q8N108	512 aa		13	□□□□□ -0.33
SMARCA2-223	ENST00000634435	BBX	Q8WY36	941 aa	Predicted RBP	13	□□□□□ -0.33
SMARCA2-223	ENST00000634435	VSIG10	Q8N0Z9	540 aa		12.99	□□□□□ -0.33
SMARCA2-223	ENST00000634435	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.99	□□□□□ -0.33
SMARCA2-223	ENST00000634435	DNAJC5	Q9H3Z4	198 aa		12.96	□□□□□ -0.33
SMARCA2-223	ENST00000634435	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.96	□□□□□ -0.33
SMARCA2-223	ENST00000634435	PLEKHG5	O94827	1062 aa		12.94	□□□□□ -0.34
SMARCA2-223	ENST00000634435	BCAN	Q96GW7	911 aa		12.91	□□□□□ -0.34
SMARCA2-223	ENST00000634435	RGL2	O15211	777 aa		12.89	□□□□□ -0.35
SMARCA2-223	ENST00000634435	NPM1	P06748	294 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
SMARCA2-223	ENST00000634435	PRKAR2A	P13861	404 aa	Known RBP	12.89	□□□□□ -0.35
SMARCA2-223	ENST00000634435	CLEC11A	Q9Y240	323 aa		12.87	□□□□□ -0.35
SMARCA2-223	ENST00000634435	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.86	□□□□□ -0.35
SMARCA2-223	ENST00000634435	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.84	□□□□□ -0.35
SMARCA2-223	ENST00000634435	TRIM41	Q8WV44	630 aa		12.83	□□□□□ -0.36
SMARCA2-223	ENST00000634435	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.82	□□□□□ -0.36
SMARCA2-223	ENST00000634435	C19orf67	A6NJJ6	358 aa		12.8	□□□□□ -0.36
SMARCA2-223	ENST00000634435	CUX2	O14529	1486 aa		12.79	□□□□□ -0.36
SMARCA2-223	ENST00000634435	CFAP44	Q96MT7	982 aa		12.79	□□□□□ -0.36
SMARCA2-223	ENST00000634435	ERCC6	Q03468	1493 aa		12.78	□□□□□ -0.36
SMARCA2-223	ENST00000634435	SPRYD3	Q8NCJ5	442 aa		12.77	□□□□□ -0.37
SMARCA2-223	ENST00000634435	KDM2A	Q9Y2K7	1162 aa		12.74	□□□□□ -0.37
SMARCA2-223	ENST00000634435	NCAPD3	P42695	1498 aa		12.73	□□□□□ -0.37
SMARCA2-223	ENST00000634435	GABBR2	O75899	941 aa		12.72	□□□□□ -0.37
SMARCA2-223	ENST00000634435	CHGA	P10645	457 aa	Known RBP	12.72	□□□□□ -0.37
SMARCA2-223	ENST00000634435	GSE1	Q14687	1217 aa		12.7	□□□□□ -0.38
SMARCA2-223	ENST00000634435	ATAD2B	Q9ULI0	1458 aa		12.69	□□□□□ -0.38
SMARCA2-223	ENST00000634435	CHADL	Q6NUI6	762 aa		12.66	□□□□□ -0.38
SMARCA2-223	ENST00000634435	HS6ST3	Q8IZP7	471 aa		12.66	□□□□□ -0.38
SMARCA2-223	ENST00000634435	TAOK2	Q9UL54	1235 aa		12.66	□□□□□ -0.38
SMARCA2-223	ENST00000634435	LHX8	Q68G74	356 aa		12.65	□□□□□ -0.38
SMARCA2-223	ENST00000634435	SMARCA2	P51531	1590 aa		12.64	□□□□□ -0.39
SMARCA2-223	ENST00000634435	HMGXB3	Q12766	1538 aa		12.64	□□□□□ -0.39
SMARCA2-223	ENST00000634435	TSHZ2	Q9NRE2	1034 aa		12.63	□□□□□ -0.39
SMARCA2-223	ENST00000634435	NUBP1	P53384	320 aa		12.62	□□□□□ -0.39
SMARCA2-223	ENST00000634435	NES	P48681	1621 aa		12.61	□□□□□ -0.39
SMARCA2-223	ENST00000634435	SMARCA4	P51532	1647 aa		12.61	□□□□□ -0.39
SMARCA2-223	ENST00000634435	PRR29	P0C7W0	189 aa		12.59	□□□□□ -0.39
SMARCA2-223	ENST00000634435	RNF25	Q96BH1	459 aa	Predicted RBP	12.58	□□□□□ -0.4
SMARCA2-223	ENST00000634435	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.58	□□□□□ -0.4
SMARCA2-223	ENST00000634435	RIOK3	O14730	519 aa	Known RBP	12.54	□□□□□ -0.4
SMARCA2-223	ENST00000634435	PRKCSH	P14314	528 aa	Predicted RBP	12.54	□□□□□ -0.4
SMARCA2-223	ENST00000634435	DCAF8	Q5TAQ9	597 aa		12.54	□□□□□ -0.4
SMARCA2-223	ENST00000634435	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.54	□□□□□ -0.4
SMARCA2-223	ENST00000634435	FAM212A	Q96EL1	285 aa		12.53	□□□□□ -0.4
SMARCA2-223	ENST00000634435	CREBZF	Q9NS37	354 aa		12.51	□□□□□ -0.41
SMARCA2-223	ENST00000634435	THOC2	Q8NI27	1593 aa	Known RBP	12.51	□□□□□ -0.41
SMARCA2-223	ENST00000634435	MNX1	P50219	401 aa	Predicted RBP	12.48	□□□□□ -0.41
SMARCA2-223	ENST00000634435	PEG3	Q9GZU2	1588 aa		12.47	□□□□□ -0.41
SMARCA2-223	ENST00000634435	LAMC3	Q9Y6N6	1575 aa		12.47	□□□□□ -0.41
SMARCA2-223	ENST00000634435	CD44	P16070	742 aa	Known RBP	12.47	□□□□□ -0.41
SMARCA2-223	ENST00000634435	VGF	O15240	615 aa	Predicted RBP	12.46	□□□□□ -0.41
SMARCA2-223	ENST00000634435	CHRM1	P11229	460 aa	Predicted RBP	12.46	□□□□□ -0.41
SMARCA2-223	ENST00000634435	TPRN	Q4KMQ1	711 aa		12.45	□□□□□ -0.42
SMARCA2-223	ENST00000634435	PDS5B	Q9NTI5	1447 aa		12.45	□□□□□ -0.42
SMARCA2-223	ENST00000634435	POTEI	P0CG38	1075 aa		12.43	□□□□□ -0.42
SMARCA2-223	ENST00000634435	NKX1-1	Q15270	411 aa	Predicted RBP	12.43	□□□□□ -0.42
SMARCA2-223	ENST00000634435	SGIP1	Q9BQI5	828 aa		12.42	□□□□□ -0.42
SMARCA2-223	ENST00000634435	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.42	□□□□□ -0.42
SMARCA2-223	ENST00000634435	MROH2B	Q7Z745	1585 aa		12.42	□□□□□ -0.42
SMARCA2-223	ENST00000634435	STK25	O00506	426 aa		12.4	□□□□□ -0.42
SMARCA2-223	ENST00000634435	GTPBP6	O43824	516 aa	Predicted RBP	12.39	□□□□□ -0.43
SMARCA2-223	ENST00000634435	RASEF	Q8IZ41	740 aa		12.39	□□□□□ -0.43
SMARCA2-223	ENST00000634435	KIF21A	Q7Z4S6	1674 aa		12.38	□□□□□ -0.43
SMARCA2-223	ENST00000634435	CLCN6	P51797	869 aa		12.38	□□□□□ -0.43
SMARCA2-223	ENST00000634435	NBR1	Q14596	966 aa		12.38	□□□□□ -0.43
SMARCA2-223	ENST00000634435	CADPS	Q9ULU8	1353 aa		12.36	□□□□□ -0.43
SMARCA2-223	ENST00000634435	MRC2	Q9UBG0	1479 aa		12.35	□□□□□ -0.43
SMARCA2-223	ENST00000634435	RYDEN	Q9NUL5	291 aa	Known RBP	12.35	□□□□□ -0.43
SMARCA2-223	ENST00000634435	WDR62	O43379	1518 aa		12.31	□□□□□ -0.44
SMARCA2-223	ENST00000634435	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.3	□□□□□ -0.44
SMARCA2-223	ENST00000634435	ZFP91	Q96JP5	570 aa	Predicted RBP	12.3	□□□□□ -0.44
SMARCA2-223	ENST00000634435	DCBLD2	Q96PD2	775 aa		12.3	□□□□□ -0.44
SMARCA2-223	ENST00000634435	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.3	□□□□□ -0.44
SMARCA2-223	ENST00000634435	STK24	Q9Y6E0	443 aa		12.29	□□□□□ -0.44
SMARCA2-223	ENST00000634435	PYGB	P11216	843 aa		12.27	□□□□□ -0.45
SMARCA2-223	ENST00000634435	CEP164	Q9UPV0	1460 aa		12.27	□□□□□ -0.45
SMARCA2-223	ENST00000634435	ZNF579	Q8NAF0	562 aa	Known RBP	12.24	□□□□□ -0.45
SMARCA2-223	ENST00000634435	WIZ	O95785	1651 aa		12.23	□□□□□ -0.45
SMARCA2-223	ENST00000634435	FANCD2	Q9BXW9	1451 aa		12.23	□□□□□ -0.45
SMARCA2-223	ENST00000634435	ZRANB1	Q9UGI0	708 aa		12.23	□□□□□ -0.45
SMARCA2-223	ENST00000634435	PLSCR2	Q9NRY7	297 aa		12.2	□□□□□ -0.46
SMARCA2-223	ENST00000634435	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.19	□□□□□ -0.46
SMARCA2-223	ENST00000634435	CFTR	P13569	1480 aa		12.18	□□□□□ -0.46
SMARCA2-223	ENST00000634435	URB2	Q14146	1524 aa	Known RBP	12.12	□□□□□ -0.47
SMARCA2-223	ENST00000634435	GALR2	O43603	387 aa	Predicted RBP	12.12	□□□□□ -0.47
SMARCA2-223	ENST00000634435	PDAP1	Q13442	181 aa	Known RBP	12.12	□□□□□ -0.47
SMARCA2-223	ENST00000634435	P3H3	Q8IVL6	736 aa		12.12	□□□□□ -0.47
SMARCA2-223	ENST00000634435	TOP2A	P11388	1531 aa	Known RBP	12.11	□□□□□ -0.47
SMARCA2-223	ENST00000634435	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.11	□□□□□ -0.47
SMARCA2-223	ENST00000634435	RSF1	Q96T23	1441 aa	Predicted RBP	12.11	□□□□□ -0.47
SMARCA2-223	ENST00000634435	PAK3	O75914	559 aa	Predicted RBP	12.05	□□□□□ -0.48
SMARCA2-223	ENST00000634435	OTUD5	Q96G74	571 aa		12.05	□□□□□ -0.48
SMARCA2-223	ENST00000634435	CCDC61	Q9Y6R9	512 aa		12.03	□□□□□ -0.48
SMARCA2-223	ENST00000634435	IFT140	Q96RY7	1462 aa		12.02	□□□□□ -0.48
SMARCA2-223	ENST00000634435	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.02	□□□□□ -0.48
SMARCA2-223	ENST00000634435	POTEB2	H3BUK9	544 aa		12.01	□□□□□ -0.49
SMARCA2-223	ENST00000634435	PSEN1	P49768	467 aa		12.01	□□□□□ -0.49

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