RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 MS4A3Q96HJ5 214 aa11.19□□□□□ -0.62
NPHP3-ACAD11-202ENST00000632629 ATMINO43313 823 aaPredicted RBP11.18□□□□□ -0.62
NPHP3-ACAD11-202ENST00000632629 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
NPHP3-ACAD11-202ENST00000632629 C7P10643 843 aa11.17□□□□□ -0.62
NPHP3-ACAD11-202ENST00000632629 SLC39A7Q92504 469 aa11.17□□□□□ -0.62
NPHP3-ACAD11-202ENST00000632629 MAMSTRQ6ZN01 415 aa11.13□□□□□ -0.63
NPHP3-ACAD11-202ENST00000632629 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
NPHP3-ACAD11-202ENST00000632629 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
NPHP3-ACAD11-202ENST00000632629 ATN1P54259 1190 aaPredicted RBP11.06□□□□□ -0.64
NPHP3-ACAD11-202ENST00000632629 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
NPHP3-ACAD11-202ENST00000632629 SCUBE2Q9NQ36 999 aa11.04□□□□□ -0.64
NPHP3-ACAD11-202ENST00000632629 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
NPHP3-ACAD11-202ENST00000632629 POTEFA5A3E0 1075 aa10.99□□□□□ -0.65
NPHP3-ACAD11-202ENST00000632629 KIF12Q96FN5 646 aa10.98□□□□□ -0.65
NPHP3-ACAD11-202ENST00000632629 BMP2KQ9NSY1 1161 aaPredicted RBP10.96□□□□□ -0.65
NPHP3-ACAD11-202ENST00000632629 TRPC6Q9Y210 931 aa10.95□□□□□ -0.66
NPHP3-ACAD11-202ENST00000632629 MAP3K13O43283 966 aa10.9□□□□□ -0.66
NPHP3-ACAD11-202ENST00000632629 TIE1P35590 1138 aa10.9□□□□□ -0.66
NPHP3-ACAD11-202ENST00000632629 PROM2Q8N271 834 aa10.88□□□□□ -0.67
NPHP3-ACAD11-202ENST00000632629 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
NPHP3-ACAD11-202ENST00000632629 SEC24BO95487 1268 aa10.85□□□□□ -0.67
NPHP3-ACAD11-202ENST00000632629 CDAN1Q8IWY9 1227 aa10.85□□□□□ -0.67
NPHP3-ACAD11-202ENST00000632629 TTLL13PA6NNM8 815 aa10.84□□□□□ -0.67
NPHP3-ACAD11-202ENST00000632629 EHMT2Q96KQ7 1210 aa10.83□□□□□ -0.68
NPHP3-ACAD11-202ENST00000632629 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
NPHP3-ACAD11-202ENST00000632629 PLEKHG5O94827 1062 aa10.79□□□□□ -0.68
NPHP3-ACAD11-202ENST00000632629 MIER1Q8N108 512 aa10.78□□□□□ -0.68
NPHP3-ACAD11-202ENST00000632629 TRIM35Q9UPQ4 493 aa10.77□□□□□ -0.69
NPHP3-ACAD11-202ENST00000632629 IER5LQ5T953 404 aa10.76□□□□□ -0.69
NPHP3-ACAD11-202ENST00000632629 ST18O60284 1047 aa10.73□□□□□ -0.69
NPHP3-ACAD11-202ENST00000632629 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
NPHP3-ACAD11-202ENST00000632629 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
NPHP3-ACAD11-202ENST00000632629 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
NPHP3-ACAD11-202ENST00000632629 IFNL1Q8IU54 200 aa10.65□□□□□ -0.7
NPHP3-ACAD11-202ENST00000632629 PLCG2P16885 1265 aa10.63□□□□□ -0.71
NPHP3-ACAD11-202ENST00000632629 PLCD3Q8N3E9 789 aa10.63□□□□□ -0.71
NPHP3-ACAD11-202ENST00000632629 TMEM106CQ9BVX2 250 aa10.63□□□□□ -0.71
NPHP3-ACAD11-202ENST00000632629 NUBP1P53384 320 aa10.61□□□□□ -0.71
NPHP3-ACAD11-202ENST00000632629 MMRN1Q13201 1228 aa10.61□□□□□ -0.71
NPHP3-ACAD11-202ENST00000632629 IRX5P78411 483 aaPredicted RBP10.59□□□□□ -0.71
NPHP3-ACAD11-202ENST00000632629 SPNS2Q8IVW8 549 aa10.59□□□□□ -0.71
NPHP3-ACAD11-202ENST00000632629 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
NPHP3-ACAD11-202ENST00000632629 TMEM121BQ9BXQ6 578 aaPredicted RBP10.56□□□□□ -0.72
NPHP3-ACAD11-202ENST00000632629 FAM212AQ96EL1 285 aa10.54□□□□□ -0.72
NPHP3-ACAD11-202ENST00000632629 OCEL1Q9H607 264 aa10.53□□□□□ -0.72
NPHP3-ACAD11-202ENST00000632629 SNPHO15079 494 aa10.52□□□□□ -0.73
NPHP3-ACAD11-202ENST00000632629 MARVELD3Q96A59 401 aa10.51□□□□□ -0.73
NPHP3-ACAD11-202ENST00000632629 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.5□□□□□ -0.73
NPHP3-ACAD11-202ENST00000632629 PYGBP11216 843 aa10.42□□□□□ -0.74
NPHP3-ACAD11-202ENST00000632629 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
NPHP3-ACAD11-202ENST00000632629 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
NPHP3-ACAD11-202ENST00000632629 EMP3P54852 163 aa10.38□□□□□ -0.75
NPHP3-ACAD11-202ENST00000632629 PDCD7Q8N8D1 485 aaKnown RBP10.36□□□□□ -0.75
NPHP3-ACAD11-202ENST00000632629 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
NPHP3-ACAD11-202ENST00000632629 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
NPHP3-ACAD11-202ENST00000632629 KRTAP3-2Q9BYR7 98 aa10.34□□□□□ -0.75
NPHP3-ACAD11-202ENST00000632629 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
NPHP3-ACAD11-202ENST00000632629 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
NPHP3-ACAD11-202ENST00000632629 HS3ST6Q96QI5 342 aa10.33□□□□□ -0.76
NPHP3-ACAD11-202ENST00000632629 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
NPHP3-ACAD11-202ENST00000632629 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
NPHP3-ACAD11-202ENST00000632629 MKRN3Q13064 507 aaKnown RBP10.29□□□□□ -0.76
NPHP3-ACAD11-202ENST00000632629 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
NPHP3-ACAD11-202ENST00000632629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.772e-8■■■□□ 17.8
NPHP3-ACAD11-202ENST00000632629 ZNF467Q7Z7K2 595 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-ACAD11-202ENST00000632629 FKBP8Q14318 412 aa10.21□□□□□ -0.77
NPHP3-ACAD11-202ENST00000632629 PSEN1P49768 467 aa10.19□□□□□ -0.78
NPHP3-ACAD11-202ENST00000632629 GSE1Q14687 1217 aa10.18□□□□□ -0.78
NPHP3-ACAD11-202ENST00000632629 DPY19L2Q6NUT2 758 aa10.17□□□□□ -0.78
NPHP3-ACAD11-202ENST00000632629 ILDR1Q86SU0 546 aaPredicted RBP10.17□□□□□ -0.78
NPHP3-ACAD11-202ENST00000632629 CHRM1P11229 460 aaPredicted RBP10.16□□□□□ -0.78
NPHP3-ACAD11-202ENST00000632629 HOXB3P14651 431 aaPredicted RBP10.15□□□□□ -0.78
NPHP3-ACAD11-202ENST00000632629 FBXO3Q9UK99 471 aa10.13□□□□□ -0.79
NPHP3-ACAD11-202ENST00000632629 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
NPHP3-ACAD11-202ENST00000632629 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
NPHP3-ACAD11-202ENST00000632629 ERBB3P21860 1342 aa10.1□□□□□ -0.79
NPHP3-ACAD11-202ENST00000632629 G3V3G9 751 aa10.1□□□□□ -0.79
NPHP3-ACAD11-202ENST00000632629 ZNF710Q8N1W2 664 aa10.1□□□□□ -0.79
NPHP3-ACAD11-202ENST00000632629 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
NPHP3-ACAD11-202ENST00000632629 PDAP1Q13442 181 aaKnown RBP10.09□□□□□ -0.79
NPHP3-ACAD11-202ENST00000632629 RNF166Q96A37 237 aaPredicted RBP10.08□□□□□ -0.8
NPHP3-ACAD11-202ENST00000632629 CABP2Q9NPB3 220 aa10.07□□□□□ -0.8
NPHP3-ACAD11-202ENST00000632629 DOK7Q18PE1 504 aa10.06□□□□□ -0.8
NPHP3-ACAD11-202ENST00000632629 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
NPHP3-ACAD11-202ENST00000632629 VARS2Q5ST30 1063 aaKnown RBP10.02□□□□□ -0.81
NPHP3-ACAD11-202ENST00000632629 MYT1LQ9UL68 1186 aa10.02□□□□□ -0.81
NPHP3-ACAD11-202ENST00000632629 RIMBP2O15034 1052 aa10□□□□□ -0.81
NPHP3-ACAD11-202ENST00000632629 ZNF687Q8N1G0 1237 aa9.96□□□□□ -0.82
NPHP3-ACAD11-202ENST00000632629 ZSWIM6Q9HCJ5 1215 aa9.92□□□□□ -0.82
NPHP3-ACAD11-202ENST00000632629 CIZ1Q9ULV3 898 aaPredicted RBP9.92□□□□□ -0.82
NPHP3-ACAD11-202ENST00000632629 GPR153Q6NV75 609 aa9.9□□□□□ -0.82
NPHP3-ACAD11-202ENST00000632629 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
NPHP3-ACAD11-202ENST00000632629 PTGER2P43116 358 aa9.89□□□□□ -0.83
NPHP3-ACAD11-202ENST00000632629 EFCAB3Q8N7B9 438 aa9.89□□□□□ -0.83
NPHP3-ACAD11-202ENST00000632629 MICALL2Q8IY33 904 aa9.87□□□□□ -0.83
NPHP3-ACAD11-202ENST00000632629 SPOCK2Q92563 424 aa9.87□□□□□ -0.83
NPHP3-ACAD11-202ENST00000632629 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
NPHP3-ACAD11-202ENST00000632629 ARSIQ5FYB1 569 aa9.82□□□□□ -0.84
NPHP3-ACAD11-202ENST00000632629 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
NPHP3-ACAD11-202ENST00000632629 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms