RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PDIA4P13667 645 aaKnown RBP7.67□□□□□ -1.18
SDCBP-213ENST00000630925 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
SDCBP-213ENST00000630925 ZBTB7CA1YPR0 619 aa7.66□□□□□ -1.18
SDCBP-213ENST00000630925 NECTIN2Q92692 538 aa7.65□□□□□ -1.18
SDCBP-213ENST00000630925 VASPP50552 380 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-213ENST00000630925 ZMYND15Q9H091 742 aa7.61□□□□□ -1.19
SDCBP-213ENST00000630925 PUS7Q96PZ0 661 aaKnown RBP7.61□□□□□ -1.19
SDCBP-213ENST00000630925 RSPH6AQ9H0K4 717 aa7.6□□□□□ -1.19
SDCBP-213ENST00000630925 C1orf115Q9H7X2 142 aa7.6□□□□□ -1.19
SDCBP-213ENST00000630925 U3KPZ7 1027 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-213ENST00000630925 ARID3AQ99856 593 aa7.59□□□□□ -1.19
SDCBP-213ENST00000630925 UBE2Q2Q8WVN8 375 aa7.58□□□□□ -1.2
SDCBP-213ENST00000630925 SPINK5Q9NQ38 1064 aaPredicted RBP7.57□□□□□ -1.2
SDCBP-213ENST00000630925 BRD2P25440 801 aaKnown RBP7.54□□□□□ -1.2
SDCBP-213ENST00000630925 SLC4A2P04920 1241 aa7.51□□□□□ -1.21
SDCBP-213ENST00000630925 DHX37Q8IY37 1157 aaKnown RBP7.51□□□□□ -1.21
SDCBP-213ENST00000630925 ECM2O94769 699 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-213ENST00000630925 RGS22Q8NE09 1264 aa7.49□□□□□ -1.21
SDCBP-213ENST00000630925 RBM42Q9BTD8 480 aaKnown RBP7.49□□□□□ -1.21
SDCBP-213ENST00000630925 ZNF219Q9P2Y4 722 aaPredicted RBP7.49□□□□□ -1.21
SDCBP-213ENST00000630925 RGL2O15211 777 aa7.48□□□□□ -1.21
SDCBP-213ENST00000630925 NEUROD2Q15784 382 aa7.48□□□□□ -1.21
SDCBP-213ENST00000630925 MYCNP04198 464 aaPredicted RBP7.47□□□□□ -1.21
SDCBP-213ENST00000630925 KCTD17Q8N5Z5 321 aa7.47□□□□□ -1.21
SDCBP-213ENST00000630925 RAD21O60216 631 aa7.44□□□□□ -1.22
SDCBP-213ENST00000630925 LMOD2Q6P5Q4 547 aa7.43□□□□□ -1.22
SDCBP-213ENST00000630925 PROM2Q8N271 834 aa7.43□□□□□ -1.22
SDCBP-213ENST00000630925 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.42□□□□□ -1.22
SDCBP-213ENST00000630925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-213ENST00000630925 HNRNPUL2Q1KMD3 747 aaKnown RBP7.42□□□□□ -1.22
SDCBP-213ENST00000630925 ARID3CA6NKF2 412 aa7.41□□□□□ -1.22
SDCBP-213ENST00000630925 PDE4CQ08493 712 aa7.4□□□□□ -1.22
SDCBP-213ENST00000630925 ZNF428Q96B54 188 aa7.4□□□□□ -1.22
SDCBP-213ENST00000630925 MTMR7Q9Y216 660 aa7.4□□□□□ -1.22
SDCBP-213ENST00000630925 BCL11AQ9H165 835 aa7.4□□□□□ -1.23
SDCBP-213ENST00000630925 TAF7LQ5H9L4 462 aa7.39□□□□□ -1.23
SDCBP-213ENST00000630925 ABCB7O75027 752 aa7.39□□□□□ -1.23
SDCBP-213ENST00000630925 CHGAP10645 457 aaKnown RBP7.39□□□□□ -1.23
SDCBP-213ENST00000630925 CHRDL2Q6WN34 429 aa7.39□□□□□ -1.23
SDCBP-213ENST00000630925 APBB1O00213 710 aa7.37□□□□□ -1.23
SDCBP-213ENST00000630925 RBM25P49756 843 aaKnown RBP7.35□□□□□ -1.23
SDCBP-213ENST00000630925 FAM9AQ8IZU1 332 aaPredicted RBP7.34□□□□□ -1.23
SDCBP-213ENST00000630925 FOXD4L5Q5VV16 416 aaPredicted RBP7.34□□□□□ -1.23
SDCBP-213ENST00000630925 FOXD4L4Q8WXT5 416 aaPredicted RBP7.34□□□□□ -1.23
SDCBP-213ENST00000630925 TRAIPQ9BWF2 469 aa7.33□□□□□ -1.24
SDCBP-213ENST00000630925 SLC24A3Q9HC58 644 aa7.32□□□□□ -1.24
SDCBP-213ENST00000630925 ATF5Q9Y2D1 282 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-213ENST00000630925 SPDYE4A6NLX3 237 aa7.31□□□□□ -1.24
SDCBP-213ENST00000630925 POLR3GLQ9BT43 218 aa7.31□□□□□ -1.24
SDCBP-213ENST00000630925 ZC3H15Q8WU90 426 aaKnown RBP7.31□□□□□ -1.24
SDCBP-213ENST00000630925 SPOCK2Q92563 424 aa7.31□□□□□ -1.24
SDCBP-213ENST00000630925 MFAP1P55081 439 aaKnown RBP7.29□□□□□ -1.24
SDCBP-213ENST00000630925 ZNF692Q9BU19 519 aaPredicted RBP7.29□□□□□ -1.24
SDCBP-213ENST00000630925 TMCO4Q5TGY1 634 aa7.29□□□□□ -1.24
SDCBP-213ENST00000630925 FAM177A1Q8N128 213 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-213ENST00000630925 CCDC82Q8N4S0 544 aa7.28□□□□□ -1.24
SDCBP-213ENST00000630925 CCDC180Q9P1Z9 1646 aa7.27□□□□□ -1.25
SDCBP-213ENST00000630925 HS6ST3Q8IZP7 471 aa7.26□□□□□ -1.25
SDCBP-213ENST00000630925 PABPN1Q86U42 306 aaKnown RBP eCLIP7.26□□□□□ -1.25
SDCBP-213ENST00000630925 AEBP1Q8IUX7 1158 aa7.25□□□□□ -1.25
SDCBP-213ENST00000630925 BCCIPQ9P287 314 aaKnown RBP eCLIP7.25□□□□□ -1.25
SDCBP-213ENST00000630925 E9PSI1 815 aa7.24□□□□□ -1.25
SDCBP-213ENST00000630925 MKRN3Q13064 507 aaKnown RBP7.24□□□□□ -1.25
SDCBP-213ENST00000630925 P3H3Q8IVL6 736 aa7.24□□□□□ -1.25
SDCBP-213ENST00000630925 NEFLP07196 543 aa7.24□□□□□ -1.25
SDCBP-213ENST00000630925 USP35Q9P2H5 1018 aa7.24□□□□□ -1.25
SDCBP-213ENST00000630925 RB1CC1Q8TDY2 1594 aa7.23□□□□□ -1.25
SDCBP-213ENST00000630925 NKX1-1Q15270 411 aaPredicted RBP7.23□□□□□ -1.25
SDCBP-213ENST00000630925 CECR2Q9BXF3 1484 aa7.22□□□□□ -1.25
SDCBP-213ENST00000630925 GTPBP6O43824 516 aaPredicted RBP7.21□□□□□ -1.25
SDCBP-213ENST00000630925 RSPH4AQ5TD94 716 aa7.21□□□□□ -1.25
SDCBP-213ENST00000630925 LHX8Q68G74 356 aa7.21□□□□□ -1.25
SDCBP-213ENST00000630925 TRIM41Q8WV44 630 aa7.21□□□□□ -1.25
SDCBP-213ENST00000630925 GZF1Q9H116 711 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-213ENST00000630925 KCNV2Q8TDN2 545 aa7.19□□□□□ -1.26
SDCBP-213ENST00000630925 AKT1S1Q96B36 256 aa7.19□□□□□ -1.26
SDCBP-213ENST00000630925 PCDH10Q9P2E7 1040 aa7.19□□□□□ -1.26
SDCBP-213ENST00000630925 IL27Q8NEV9 243 aa7.18□□□□□ -1.26
SDCBP-213ENST00000630925 CWC22Q9HCG8 908 aaKnown RBP7.18□□□□□ -1.26
SDCBP-213ENST00000630925 BCL11BQ9C0K0 894 aaPredicted RBP7.17□□□□□ -1.26
SDCBP-213ENST00000630925 GPBP1L1Q9HC44 474 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-213ENST00000630925 TICAM2Q86XR7 235 aa7.16□□□□□ -1.26
SDCBP-213ENST00000630925 CC2D2AQ9P2K1 1620 aa7.15□□□□□ -1.26
SDCBP-213ENST00000630925 CCDC125Q86Z20 511 aa7.15□□□□□ -1.27
SDCBP-213ENST00000630925 CERS3Q8IU89 383 aa7.15□□□□□ -1.27
SDCBP-213ENST00000630925 BRPF3Q9ULD4 1205 aa7.15□□□□□ -1.27
SDCBP-213ENST00000630925 ZMYND10O75800 440 aa7.14□□□□□ -1.27
SDCBP-213ENST00000630925 ZNF592Q92610 1267 aa7.14□□□□□ -1.27
SDCBP-213ENST00000630925 ZFP91Q96JP5 570 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-213ENST00000630925 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-213ENST00000630925 BICRAQ9NZM4 1560 aa7.13□□□□□ -1.27
SDCBP-213ENST00000630925 CUX2O14529 1486 aa7.13□□□□□ -1.27
SDCBP-213ENST00000630925 POLA2Q14181 598 aa7.13□□□□□ -1.27
SDCBP-213ENST00000630925 CC2D2BQ6DHV5 1058 aa7.13□□□□□ -1.27
SDCBP-213ENST00000630925 PPM1GO15355 546 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-213ENST00000630925 WDR70Q9NW82 654 aa7.12□□□□□ -1.27
SDCBP-213ENST00000630925 HAX1O00165 279 aa7.12□□□□□ -1.27
SDCBP-213ENST00000630925 TRAK2O60296 914 aa7.12□□□□□ -1.27
SDCBP-213ENST00000630925 UNC13AQ9UPW8 1703 aa7.11□□□□□ -1.27
SDCBP-213ENST00000630925 BARGINQ6ZT62 677 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms