RNA–Protein interactions for RNA: ENST00000628692.2

LINC01828-210, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 1,404 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-210ENST00000628692 SPRYD3Q8NCJ5 442 aa12.2□□□□□ -0.46
LINC01828-210ENST00000628692 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
LINC01828-210ENST00000628692 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
LINC01828-210ENST00000628692 GSE1Q14687 1217 aa12.18□□□□□ -0.46
LINC01828-210ENST00000628692 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
LINC01828-210ENST00000628692 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
LINC01828-210ENST00000628692 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
LINC01828-210ENST00000628692 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
LINC01828-210ENST00000628692 FAM212AQ96EL1 285 aa12.03□□□□□ -0.48
LINC01828-210ENST00000628692 NUBP1P53384 320 aa12.03□□□□□ -0.48
LINC01828-210ENST00000628692 LHX8Q68G74 356 aa12.03□□□□□ -0.48
LINC01828-210ENST00000628692 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
LINC01828-210ENST00000628692 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
LINC01828-210ENST00000628692 TSHZ2Q9NRE2 1034 aa11.99□□□□□ -0.49
LINC01828-210ENST00000628692 RIOK3O14730 519 aaKnown RBP11.97□□□□□ -0.49
LINC01828-210ENST00000628692 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
LINC01828-210ENST00000628692 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
LINC01828-210ENST00000628692 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
LINC01828-210ENST00000628692 GABBR2O75899 941 aa11.91□□□□□ -0.5
LINC01828-210ENST00000628692 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
LINC01828-210ENST00000628692 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
LINC01828-210ENST00000628692 STK25O00506 426 aa11.89□□□□□ -0.51
LINC01828-210ENST00000628692 DNAJC5Q9H3Z4 198 aa11.88□□□□□ -0.51
LINC01828-210ENST00000628692 CHRM1P11229 460 aaPredicted RBP11.87□□□□□ -0.51
LINC01828-210ENST00000628692 MNX1P50219 401 aaPredicted RBP11.86□□□□□ -0.51
LINC01828-210ENST00000628692 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
LINC01828-210ENST00000628692 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
LINC01828-210ENST00000628692 PRKCSHP14314 528 aaPredicted RBP11.83□□□□□ -0.52
LINC01828-210ENST00000628692 PYGBP11216 843 aa11.81□□□□□ -0.52
LINC01828-210ENST00000628692 NBR1Q14596 966 aa11.81□□□□□ -0.52
LINC01828-210ENST00000628692 RYDENQ9NUL5 291 aaKnown RBP11.81□□□□□ -0.52
LINC01828-210ENST00000628692 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
LINC01828-210ENST00000628692 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
LINC01828-210ENST00000628692 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.53
LINC01828-210ENST00000628692 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
LINC01828-210ENST00000628692 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
LINC01828-210ENST00000628692 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
LINC01828-210ENST00000628692 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
LINC01828-210ENST00000628692 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
LINC01828-210ENST00000628692 TSPYL2Q9H2G4 693 aaPredicted RBP11.72□□□□□ -0.53
LINC01828-210ENST00000628692 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
LINC01828-210ENST00000628692 CHADLQ6NUI6 762 aa11.69□□□□□ -0.54
LINC01828-210ENST00000628692 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
LINC01828-210ENST00000628692 FARP1Q9Y4F1 1045 aaPredicted RBP11.65□□□□□ -0.54
LINC01828-210ENST00000628692 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
LINC01828-210ENST00000628692 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
LINC01828-210ENST00000628692 WDR70Q9NW82 654 aa11.57□□□□□ -0.56
LINC01828-210ENST00000628692 PCDHB8Q9UN66 801 aa11.54□□□□□ -0.56
LINC01828-210ENST00000628692 PCDHB13Q9Y5F0 798 aa11.54□□□□□ -0.56
LINC01828-210ENST00000628692 PSEN1P49768 467 aa11.52□□□□□ -0.56
LINC01828-210ENST00000628692 P3H3Q8IVL6 736 aa11.52□□□□□ -0.56
LINC01828-210ENST00000628692 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.56
LINC01828-210ENST00000628692 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
LINC01828-210ENST00000628692 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.57
LINC01828-210ENST00000628692 CLCN6P51797 869 aa11.46□□□□□ -0.57
LINC01828-210ENST00000628692 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
LINC01828-210ENST00000628692 NLRP6P59044 892 aa11.4□□□□□ -0.58
LINC01828-210ENST00000628692 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
LINC01828-210ENST00000628692 MFRPQ9BY79 579 aa11.4□□□□□ -0.58
LINC01828-210ENST00000628692 MAP3K13O43283 966 aa11.39□□□□□ -0.59
LINC01828-210ENST00000628692 SOX12O15370 315 aa11.38□□□□□ -0.59
LINC01828-210ENST00000628692 CABP2Q9NPB3 220 aa11.38□□□□□ -0.59
LINC01828-210ENST00000628692 TULP1O00294 542 aaPredicted RBP11.37□□□□□ -0.59
LINC01828-210ENST00000628692 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
LINC01828-210ENST00000628692 CADPS2Q86UW7 1296 aa11.36□□□□□ -0.59
LINC01828-210ENST00000628692 EFCAB3Q8N7B9 438 aa11.36□□□□□ -0.59
LINC01828-210ENST00000628692 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
LINC01828-210ENST00000628692 POTEMA6NI47 508 aa11.35□□□□□ -0.59
LINC01828-210ENST00000628692 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
LINC01828-210ENST00000628692 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
LINC01828-210ENST00000628692 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
LINC01828-210ENST00000628692 PHF8Q9UPP1 1060 aa11.3□□□□□ -0.6
LINC01828-210ENST00000628692 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
LINC01828-210ENST00000628692 PPP1R37O75864 691 aa11.27□□□□□ -0.6
LINC01828-210ENST00000628692 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.6
LINC01828-210ENST00000628692 POTEB2H3BUK9 544 aa11.26□□□□□ -0.61
LINC01828-210ENST00000628692 E2F4Q16254 413 aa11.26□□□□□ -0.61
LINC01828-210ENST00000628692 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
LINC01828-210ENST00000628692 PDE4AP27815 886 aa11.23□□□□□ -0.61
LINC01828-210ENST00000628692 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
LINC01828-210ENST00000628692 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
LINC01828-210ENST00000628692 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
LINC01828-210ENST00000628692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC01828-210ENST00000628692 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
LINC01828-210ENST00000628692 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
LINC01828-210ENST00000628692 LARP6Q9BRS8 491 aaKnown RBP11.19□□□□□ -0.62
LINC01828-210ENST00000628692 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
LINC01828-210ENST00000628692 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
LINC01828-210ENST00000628692 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
LINC01828-210ENST00000628692 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
LINC01828-210ENST00000628692 NCKAP5LQ9HCH0 1330 aa11.11□□□□□ -0.63
LINC01828-210ENST00000628692 MS4A3Q96HJ5 214 aa11.1□□□□□ -0.63
LINC01828-210ENST00000628692 SEMA3EO15041 775 aa11.09□□□□□ -0.63
LINC01828-210ENST00000628692 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
LINC01828-210ENST00000628692 MFSD10Q14728 455 aa11.07□□□□□ -0.64
LINC01828-210ENST00000628692 TMEM132AQ24JP5 1023 aa11.07□□□□□ -0.64
LINC01828-210ENST00000628692 GTF3C3Q9Y5Q9 886 aa11.07□□□□□ -0.64
LINC01828-210ENST00000628692 TIE1P35590 1138 aa11.06□□□□□ -0.64
LINC01828-210ENST00000628692 PELP1Q8IZL8 1130 aaKnown RBP11.06□□□□□ -0.64
LINC01828-210ENST00000628692 CRISPLD2Q9H0B8 497 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms