RNA–Protein interactions for RNA: ENST00000628181.1

CHD2-214, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-214ENST00000628181 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
CHD2-214ENST00000628181 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
CHD2-214ENST00000628181 PLCD3Q8N3E9 789 aa11.15□□□□□ -0.62
CHD2-214ENST00000628181 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
CHD2-214ENST00000628181 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
CHD2-214ENST00000628181 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
CHD2-214ENST00000628181 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
CHD2-214ENST00000628181 MAP3K13O43283 966 aa11.07□□□□□ -0.64
CHD2-214ENST00000628181 NUBP1P53384 320 aa11.06□□□□□ -0.64
CHD2-214ENST00000628181 OTUD5Q96G74 571 aa11.06□□□□□ -0.64
CHD2-214ENST00000628181 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
CHD2-214ENST00000628181 METRNQ9UJH8 293 aa11.04□□□□□ -0.64
CHD2-214ENST00000628181 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
CHD2-214ENST00000628181 C7P10643 843 aa11.03□□□□□ -0.64
CHD2-214ENST00000628181 ATN1P54259 1190 aaPredicted RBP11.03□□□□□ -0.64
CHD2-214ENST00000628181 SLC39A7Q92504 469 aa11.03□□□□□ -0.64
CHD2-214ENST00000628181 ABCC9O60706 1549 aa11.03□□□□□ -0.64
CHD2-214ENST00000628181 BMP2KQ9NSY1 1161 aaPredicted RBP11.01□□□□□ -0.65
CHD2-214ENST00000628181 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
CHD2-214ENST00000628181 TIE1P35590 1138 aa10.97□□□□□ -0.65
CHD2-214ENST00000628181 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
CHD2-214ENST00000628181 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
CHD2-214ENST00000628181 FAM212AQ96EL1 285 aa10.93□□□□□ -0.66
CHD2-214ENST00000628181 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
CHD2-214ENST00000628181 POTEFA5A3E0 1075 aa10.92□□□□□ -0.66
CHD2-214ENST00000628181 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
CHD2-214ENST00000628181 IFNL1Q8IU54 200 aa10.89□□□□□ -0.67
CHD2-214ENST00000628181 DCAF8Q5TAQ9 597 aa10.86□□□□□ -0.67
CHD2-214ENST00000628181 MAMSTRQ6ZN01 415 aa10.86□□□□□ -0.67
CHD2-214ENST00000628181 VASPP50552 380 aaPredicted RBP10.85□□□□□ -0.67
CHD2-214ENST00000628181 TRIM35Q9UPQ4 493 aa10.84□□□□□ -0.67
CHD2-214ENST00000628181 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
CHD2-214ENST00000628181 PYGBP11216 843 aa10.81□□□□□ -0.68
CHD2-214ENST00000628181 IER5LQ5T953 404 aa10.8□□□□□ -0.68
CHD2-214ENST00000628181 TMEM106CQ9BVX2 250 aa10.8□□□□□ -0.68
CHD2-214ENST00000628181 SEC24BO95487 1268 aa10.79□□□□□ -0.68
CHD2-214ENST00000628181 KLHL34Q8N239 644 aa10.79□□□□□ -0.68
CHD2-214ENST00000628181 SCUBE2Q9NQ36 999 aa10.79□□□□□ -0.68
CHD2-214ENST00000628181 PCDHB8Q9UN66 801 aa10.75□□□□□ -0.69
CHD2-214ENST00000628181 POTEMA6NI47 508 aa10.73□□□□□ -0.69
CHD2-214ENST00000628181 GSE1Q14687 1217 aa10.72□□□□□ -0.69
CHD2-214ENST00000628181 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
CHD2-214ENST00000628181 IRX5P78411 483 aaPredicted RBP10.69□□□□□ -0.7
CHD2-214ENST00000628181 LCE2DQ5TA82 110 aaPredicted RBP10.69□□□□□ -0.7
CHD2-214ENST00000628181 CCDC180Q9P1Z9 1646 aa10.68□□□□□ -0.7
CHD2-214ENST00000628181 CHRM1P11229 460 aaPredicted RBP10.67□□□□□ -0.7
CHD2-214ENST00000628181 PLCG2P16885 1265 aa10.67□□□□□ -0.7
CHD2-214ENST00000628181 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
CHD2-214ENST00000628181 FAM163AQ96GL9 167 aaPredicted RBP10.67□□□□□ -0.7
CHD2-214ENST00000628181 ZNF467Q7Z7K2 595 aaPredicted RBP10.64□□□□□ -0.71
CHD2-214ENST00000628181 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
CHD2-214ENST00000628181 OCEL1Q9H607 264 aa10.63□□□□□ -0.71
CHD2-214ENST00000628181 SPOCK2Q92563 424 aa10.62□□□□□ -0.71
CHD2-214ENST00000628181 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
CHD2-214ENST00000628181 PSEN1P49768 467 aa10.56□□□□□ -0.72
CHD2-214ENST00000628181 PCDH10Q9P2E7 1040 aa10.56□□□□□ -0.72
CHD2-214ENST00000628181 CIZ1Q9ULV3 898 aaPredicted RBP10.56□□□□□ -0.72
CHD2-214ENST00000628181 PDCD7Q8N8D1 485 aaKnown RBP10.54□□□□□ -0.72
CHD2-214ENST00000628181 MKRN3Q13064 507 aaKnown RBP10.52□□□□□ -0.73
CHD2-214ENST00000628181 GOLGA2Q08379 1002 aa10.51□□□□□ -0.73
CHD2-214ENST00000628181 PDAP1Q13442 181 aaKnown RBP10.51□□□□□ -0.73
CHD2-214ENST00000628181 ST18O60284 1047 aa10.48□□□□□ -0.73
CHD2-214ENST00000628181 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.48□□□□□ -0.73
CHD2-214ENST00000628181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.47□□□□□ -0.732e-11■■□□□ 13.4
CHD2-214ENST00000628181 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
CHD2-214ENST00000628181 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
CHD2-214ENST00000628181 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
CHD2-214ENST00000628181 DPY19L2Q6NUT2 758 aa10.41□□□□□ -0.74
CHD2-214ENST00000628181 TRIM41Q8WV44 630 aa10.41□□□□□ -0.74
CHD2-214ENST00000628181 SNPHO15079 494 aa10.39□□□□□ -0.75
CHD2-214ENST00000628181 C3orf67Q6ZVT6 689 aa10.39□□□□□ -0.75
CHD2-214ENST00000628181 CDAN1Q8IWY9 1227 aa10.39□□□□□ -0.75
CHD2-214ENST00000628181 RB1CC1Q8TDY2 1594 aa10.35□□□□□ -0.75
CHD2-214ENST00000628181 TMEM121BQ9BXQ6 578 aaPredicted RBP10.35□□□□□ -0.75
CHD2-214ENST00000628181 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
CHD2-214ENST00000628181 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
CHD2-214ENST00000628181 RNF25Q96BH1 459 aaPredicted RBP10.31□□□□□ -0.76
CHD2-214ENST00000628181 MARVELD3Q96A59 401 aa10.3□□□□□ -0.76
CHD2-214ENST00000628181 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
CHD2-214ENST00000628181 G3V3G9 751 aa10.27□□□□□ -0.77
CHD2-214ENST00000628181 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.25□□□□□ -0.77
CHD2-214ENST00000628181 ZFP91Q96JP5 570 aaPredicted RBP10.25□□□□□ -0.77
CHD2-214ENST00000628181 VGFO15240 615 aaPredicted RBP10.24□□□□□ -0.77
CHD2-214ENST00000628181 SOX12O15370 315 aa10.22□□□□□ -0.77
CHD2-214ENST00000628181 HOXB3P14651 431 aaPredicted RBP10.21□□□□□ -0.77
CHD2-214ENST00000628181 EMP3P54852 163 aa10.2□□□□□ -0.78
CHD2-214ENST00000628181 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
CHD2-214ENST00000628181 NACADO15069 1562 aa10.19□□□□□ -0.78
CHD2-214ENST00000628181 POTEB3A0JP26 581 aa10.19□□□□□ -0.78
CHD2-214ENST00000628181 POTEBQ6S5H4 581 aa10.19□□□□□ -0.78
CHD2-214ENST00000628181 MICALL2Q8IY33 904 aa10.18□□□□□ -0.78
CHD2-214ENST00000628181 PHF8Q9UPP1 1060 aa10.18□□□□□ -0.78
CHD2-214ENST00000628181 FAM205CA6NFA0 338 aa10.15□□□□□ -0.78
CHD2-214ENST00000628181 TMEM92Q6UXU6 159 aa10.15□□□□□ -0.78
CHD2-214ENST00000628181 SPNS2Q8IVW8 549 aa10.15□□□□□ -0.78
CHD2-214ENST00000628181 HS3ST6Q96QI5 342 aa10.15□□□□□ -0.78
CHD2-214ENST00000628181 DNAJC5Q9H3Z4 198 aa10.15□□□□□ -0.78
CHD2-214ENST00000628181 BCL11BQ9C0K0 894 aaPredicted RBP10.13□□□□□ -0.79
CHD2-214ENST00000628181 HOXB1P14653 301 aaPredicted RBP10.11□□□□□ -0.79
CHD2-214ENST00000628181 MMRN1Q13201 1228 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms