RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
PTP4A2-220ENST00000627328 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
PTP4A2-220ENST00000627328 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
PTP4A2-220ENST00000627328 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
PTP4A2-220ENST00000627328 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
PTP4A2-220ENST00000627328 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
PTP4A2-220ENST00000627328 CDAN1Q8IWY9 1227 aa12.04□□□□□ -0.48
PTP4A2-220ENST00000627328 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
PTP4A2-220ENST00000627328 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
PTP4A2-220ENST00000627328 POTEFA5A3E0 1075 aa11.88□□□□□ -0.51
PTP4A2-220ENST00000627328 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
PTP4A2-220ENST00000627328 SEC24BO95487 1268 aa11.83□□□□□ -0.52
PTP4A2-220ENST00000627328 TSPYL2Q9H2G4 693 aaPredicted RBP11.83□□□□□ -0.52
PTP4A2-220ENST00000627328 TIE1P35590 1138 aa11.82□□□□□ -0.52
PTP4A2-220ENST00000627328 MMRN1Q13201 1228 aa11.82□□□□□ -0.52
PTP4A2-220ENST00000627328 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
PTP4A2-220ENST00000627328 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
PTP4A2-220ENST00000627328 CCDC61Q9Y6R9 512 aa11.81□□□□□ -0.52
PTP4A2-220ENST00000627328 ST18O60284 1047 aa11.77□□□□□ -0.53
PTP4A2-220ENST00000627328 SPNS2Q8IVW8 549 aa11.76□□□□□ -0.53
PTP4A2-220ENST00000627328 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
PTP4A2-220ENST00000627328 SLAIN1Q8ND83 568 aa11.74□□□□□ -0.53
PTP4A2-220ENST00000627328 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
PTP4A2-220ENST00000627328 IER5LQ5T953 404 aa11.72□□□□□ -0.53
PTP4A2-220ENST00000627328 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
PTP4A2-220ENST00000627328 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
PTP4A2-220ENST00000627328 TTLL13PA6NNM8 815 aa11.69□□□□□ -0.54
PTP4A2-220ENST00000627328 TMEM121BQ9BXQ6 578 aaPredicted RBP11.69□□□□□ -0.54
PTP4A2-220ENST00000627328 MAP3K13O43283 966 aa11.68□□□□□ -0.54
PTP4A2-220ENST00000627328 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
PTP4A2-220ENST00000627328 SNPHO15079 494 aa11.6□□□□□ -0.55
PTP4A2-220ENST00000627328 SGIP1Q9BQI5 828 aa11.57□□□□□ -0.56
PTP4A2-220ENST00000627328 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
PTP4A2-220ENST00000627328 PLCG2P16885 1265 aa11.54□□□□□ -0.56
PTP4A2-220ENST00000627328 PCDHB13Q9Y5F0 798 aa11.49□□□□□ -0.57
PTP4A2-220ENST00000627328 RASEFQ8IZ41 740 aa11.48□□□□□ -0.57
PTP4A2-220ENST00000627328 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
PTP4A2-220ENST00000627328 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.44□□□□□ -0.58
PTP4A2-220ENST00000627328 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
PTP4A2-220ENST00000627328 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
PTP4A2-220ENST00000627328 EMP3P54852 163 aa11.39□□□□□ -0.59
PTP4A2-220ENST00000627328 MIER1Q8N108 512 aa11.39□□□□□ -0.59
PTP4A2-220ENST00000627328 OCEL1Q9H607 264 aa11.39□□□□□ -0.59
PTP4A2-220ENST00000627328 PROM2Q8N271 834 aa11.38□□□□□ -0.59
PTP4A2-220ENST00000627328 IFNL1Q8IU54 200 aa11.36□□□□□ -0.59
PTP4A2-220ENST00000627328 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
PTP4A2-220ENST00000627328 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
PTP4A2-220ENST00000627328 HS3ST6Q96QI5 342 aa11.31□□□□□ -0.6
PTP4A2-220ENST00000627328 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
PTP4A2-220ENST00000627328 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
PTP4A2-220ENST00000627328 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
PTP4A2-220ENST00000627328 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
PTP4A2-220ENST00000627328 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
PTP4A2-220ENST00000627328 FAM212AQ96EL1 285 aa11.22□□□□□ -0.61
PTP4A2-220ENST00000627328 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
PTP4A2-220ENST00000627328 NUBP1P53384 320 aa11.2□□□□□ -0.62
PTP4A2-220ENST00000627328 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
PTP4A2-220ENST00000627328 RNF166Q96A37 237 aaPredicted RBP11.16□□□□□ -0.62
PTP4A2-220ENST00000627328 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
PTP4A2-220ENST00000627328 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
PTP4A2-220ENST00000627328 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
PTP4A2-220ENST00000627328 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
PTP4A2-220ENST00000627328 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
PTP4A2-220ENST00000627328 ERBB3P21860 1342 aa11.01□□□□□ -0.65
PTP4A2-220ENST00000627328 PYGBP11216 843 aa11□□□□□ -0.65
PTP4A2-220ENST00000627328 HOXB1P14653 301 aaPredicted RBP11□□□□□ -0.65
PTP4A2-220ENST00000627328 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
PTP4A2-220ENST00000627328 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
PTP4A2-220ENST00000627328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.65
PTP4A2-220ENST00000627328 PTGER2P43116 358 aa10.97□□□□□ -0.65
PTP4A2-220ENST00000627328 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
PTP4A2-220ENST00000627328 G3V3G9 751 aa10.93□□□□□ -0.66
PTP4A2-220ENST00000627328 DOK7Q18PE1 504 aa10.93□□□□□ -0.66
PTP4A2-220ENST00000627328 ZNF467Q7Z7K2 595 aaPredicted RBP10.93□□□□□ -0.66
PTP4A2-220ENST00000627328 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
PTP4A2-220ENST00000627328 VARS2Q5ST30 1063 aaKnown RBP10.88□□□□□ -0.67
PTP4A2-220ENST00000627328 ILDR1Q86SU0 546 aaPredicted RBP10.86□□□□□ -0.67
PTP4A2-220ENST00000627328 ZNF687Q8N1G0 1237 aa10.85□□□□□ -0.67
PTP4A2-220ENST00000627328 BOLA1Q9Y3E2 137 aa10.85□□□□□ -0.67
PTP4A2-220ENST00000627328 PSEN1P49768 467 aa10.8□□□□□ -0.68
PTP4A2-220ENST00000627328 DPY19L2Q6NUT2 758 aa10.79□□□□□ -0.68
PTP4A2-220ENST00000627328 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
PTP4A2-220ENST00000627328 GSE1Q14687 1217 aa10.76□□□□□ -0.69
PTP4A2-220ENST00000627328 CHRM1P11229 460 aaPredicted RBP10.73□□□□□ -0.69
PTP4A2-220ENST00000627328 PLA2G2EQ9NZK7 142 aa10.73□□□□□ -0.69
PTP4A2-220ENST00000627328 ANKRD13DQ6ZTN6 518 aa10.72□□□□□ -0.69
PTP4A2-220ENST00000627328 PDAP1Q13442 181 aaKnown RBP10.7□□□□□ -0.7
PTP4A2-220ENST00000627328 CABP2Q9NPB3 220 aa10.66□□□□□ -0.7
PTP4A2-220ENST00000627328 GPR153Q6NV75 609 aa10.65□□□□□ -0.7
PTP4A2-220ENST00000627328 HCSTQ9UBK5 93 aa10.64□□□□□ -0.71
PTP4A2-220ENST00000627328 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTP4A2-220ENST00000627328 FKBP8Q14318 412 aa10.63□□□□□ -0.71
PTP4A2-220ENST00000627328 ZNF316A6NFI3 1004 aaPredicted RBP10.56□□□□□ -0.72
PTP4A2-220ENST00000627328 PBX2P40425 430 aa10.55□□□□□ -0.72
PTP4A2-220ENST00000627328 KLHL34Q8N239 644 aa10.54□□□□□ -0.72
PTP4A2-220ENST00000627328 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
PTP4A2-220ENST00000627328 ARSIQ5FYB1 569 aa10.52□□□□□ -0.73
PTP4A2-220ENST00000627328 TMEM92Q6UXU6 159 aa10.51□□□□□ -0.73
PTP4A2-220ENST00000627328 MICALL2Q8IY33 904 aa10.51□□□□□ -0.73
PTP4A2-220ENST00000627328 RGS20O76081 388 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms