RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 ATMINO43313 823 aaPredicted RBP15.55■□□□□ 0.08
TCF4-250ENST00000625849 METRNQ9UJH8 293 aa15.55■□□□□ 0.08
TCF4-250ENST00000625849 SLC39A7Q92504 469 aa15.53■□□□□ 0.08
TCF4-250ENST00000625849 C7P10643 843 aa15.51■□□□□ 0.07
TCF4-250ENST00000625849 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
TCF4-250ENST00000625849 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
TCF4-250ENST00000625849 POTEMA6NI47 508 aa15.42■□□□□ 0.06
TCF4-250ENST00000625849 KIF12Q96FN5 646 aa15.42■□□□□ 0.06
TCF4-250ENST00000625849 ATN1P54259 1190 aaPredicted RBP15.4■□□□□ 0.06
TCF4-250ENST00000625849 MAMSTRQ6ZN01 415 aa15.39■□□□□ 0.05
TCF4-250ENST00000625849 MIER1Q8N108 512 aa15.39■□□□□ 0.05
TCF4-250ENST00000625849 POTEJP0CG39 1038 aa15.38■□□□□ 0.05
TCF4-250ENST00000625849 POTEGQ6S5H5 508 aa15.36■□□□□ 0.05
TCF4-250ENST00000625849 BMP2KQ9NSY1 1161 aaPredicted RBP15.34■□□□□ 0.05
TCF4-250ENST00000625849 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
TCF4-250ENST00000625849 MAP3K13O43283 966 aa15.31■□□□□ 0.04
TCF4-250ENST00000625849 SCUBE2Q9NQ36 999 aa15.3■□□□□ 0.04
TCF4-250ENST00000625849 TRPC6Q9Y210 931 aa15.3■□□□□ 0.04
TCF4-250ENST00000625849 TIE1P35590 1138 aa15.29■□□□□ 0.04
TCF4-250ENST00000625849 PLCD3Q8N3E9 789 aa15.24■□□□□ 0.03
TCF4-250ENST00000625849 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
TCF4-250ENST00000625849 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
TCF4-250ENST00000625849 TTLL13PA6NNM8 815 aa15.19■□□□□ 0.02
TCF4-250ENST00000625849 ZBTB47Q9UFB7 747 aaPredicted RBP15.17■□□□□ 0.02
TCF4-250ENST00000625849 FAM163AQ96GL9 167 aaPredicted RBP15.16■□□□□ 0.02
TCF4-250ENST00000625849 SGIP1Q9BQI5 828 aa15.16■□□□□ 0.02
TCF4-250ENST00000625849 SEC24BO95487 1268 aa15.14■□□□□ 0.01
TCF4-250ENST00000625849 LCE2DQ5TA82 110 aaPredicted RBP15.14■□□□□ 0.01
TCF4-250ENST00000625849 PCDHB13Q9Y5F0 798 aa15.13■□□□□ 0.01
TCF4-250ENST00000625849 NUBP1P53384 320 aa15.11■□□□□ 0.01
TCF4-250ENST00000625849 COLQQ9Y215 455 aaPredicted RBP15.11■□□□□ 0.01
TCF4-250ENST00000625849 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
TCF4-250ENST00000625849 IER5LQ5T953 404 aa15.08■□□□□ 0
TCF4-250ENST00000625849 FAM212AQ96EL1 285 aa15.05■□□□□ -0
TCF4-250ENST00000625849 IFNL1Q8IU54 200 aa15.02■□□□□ -0
TCF4-250ENST00000625849 TMEM106CQ9BVX2 250 aa14.97□□□□□ -0.01
TCF4-250ENST00000625849 FKBP8Q14318 412 aa14.96□□□□□ -0.01
TCF4-250ENST00000625849 PLCG2P16885 1265 aa14.92□□□□□ -0.02
TCF4-250ENST00000625849 SLAIN1Q8ND83 568 aa14.89□□□□□ -0.03
TCF4-250ENST00000625849 DCAF8Q5TAQ9 597 aa14.86□□□□□ -0.03
TCF4-250ENST00000625849 IRX5P78411 483 aaPredicted RBP14.84□□□□□ -0.03
TCF4-250ENST00000625849 PYGBP11216 843 aa14.82□□□□□ -0.04
TCF4-250ENST00000625849 CDAN1Q8IWY9 1227 aa14.82□□□□□ -0.04
TCF4-250ENST00000625849 ST18O60284 1047 aa14.78□□□□□ -0.04
TCF4-250ENST00000625849 OCEL1Q9H607 264 aa14.78□□□□□ -0.04
TCF4-250ENST00000625849 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
TCF4-250ENST00000625849 PCDHB8Q9UN66 801 aa14.74□□□□□ -0.05
TCF4-250ENST00000625849 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.68□□□□□ -0.06
TCF4-250ENST00000625849 GSE1Q14687 1217 aa14.65□□□□□ -0.06
TCF4-250ENST00000625849 SNPHO15079 494 aa14.64□□□□□ -0.07
TCF4-250ENST00000625849 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
TCF4-250ENST00000625849 TMEM121BQ9BXQ6 578 aaPredicted RBP14.64□□□□□ -0.07
TCF4-250ENST00000625849 ZNF467Q7Z7K2 595 aaPredicted RBP14.63□□□□□ -0.07
TCF4-250ENST00000625849 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
TCF4-250ENST00000625849 GOLGA2Q08379 1002 aa14.59□□□□□ -0.07
TCF4-250ENST00000625849 MKRN3Q13064 507 aaKnown RBP14.57□□□□□ -0.08
TCF4-250ENST00000625849 PDCD7Q8N8D1 485 aaKnown RBP14.57□□□□□ -0.08
TCF4-250ENST00000625849 C3orf67Q6ZVT6 689 aa14.54□□□□□ -0.08
TCF4-250ENST00000625849 CHRM1P11229 460 aaPredicted RBP14.53□□□□□ -0.08
TCF4-250ENST00000625849 L3MBTL3Q96JM7 780 aaPredicted RBP14.53□□□□□ -0.08
TCF4-250ENST00000625849 MARVELD3Q96A59 401 aa14.51□□□□□ -0.09
TCF4-250ENST00000625849 PSEN1P49768 467 aa14.5□□□□□ -0.09
TCF4-250ENST00000625849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.49□□□□□ -0.09
TCF4-250ENST00000625849 MMRN1Q13201 1228 aa14.45□□□□□ -0.1
TCF4-250ENST00000625849 SPNS2Q8IVW8 549 aa14.45□□□□□ -0.1
TCF4-250ENST00000625849 PDAP1Q13442 181 aaKnown RBP14.41□□□□□ -0.1
TCF4-250ENST00000625849 EMP3P54852 163 aa14.4□□□□□ -0.1
TCF4-250ENST00000625849 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
TCF4-250ENST00000625849 SPOCK2Q92563 424 aa14.34□□□□□ -0.11
TCF4-250ENST00000625849 CABP2Q9NPB3 220 aa14.33□□□□□ -0.12
TCF4-250ENST00000625849 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
TCF4-250ENST00000625849 G3V3G9 751 aa14.31□□□□□ -0.12
TCF4-250ENST00000625849 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
TCF4-250ENST00000625849 HS3ST6Q96QI5 342 aa14.31□□□□□ -0.12
TCF4-250ENST00000625849 FAM205CA6NFA0 338 aa14.29□□□□□ -0.12
TCF4-250ENST00000625849 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
TCF4-250ENST00000625849 BOLA1Q9Y3E2 137 aa14.28□□□□□ -0.12
TCF4-250ENST00000625849 POTEB3A0JP26 581 aa14.25□□□□□ -0.13
TCF4-250ENST00000625849 POTEBQ6S5H4 581 aa14.25□□□□□ -0.13
TCF4-250ENST00000625849 KRTAP3-3Q9BYR6 98 aa14.24□□□□□ -0.13
TCF4-250ENST00000625849 KRTAP3-2Q9BYR7 98 aa14.24□□□□□ -0.13
TCF4-250ENST00000625849 HOXB3P14651 431 aaPredicted RBP14.19□□□□□ -0.14
TCF4-250ENST00000625849 ZNF710Q8N1W2 664 aa14.16□□□□□ -0.14
TCF4-250ENST00000625849 HOXB1P14653 301 aaPredicted RBP14.13□□□□□ -0.15
TCF4-250ENST00000625849 DOK7Q18PE1 504 aa14.13□□□□□ -0.15
TCF4-250ENST00000625849 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
TCF4-250ENST00000625849 EFCAB3Q8N7B9 438 aa14.11□□□□□ -0.15
TCF4-250ENST00000625849 ERBB3P21860 1342 aa14.08□□□□□ -0.16
TCF4-250ENST00000625849 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
TCF4-250ENST00000625849 MICALL2Q8IY33 904 aa14.01□□□□□ -0.17
TCF4-250ENST00000625849 SOX12O15370 315 aa13.96□□□□□ -0.17
TCF4-250ENST00000625849 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
TCF4-250ENST00000625849 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.17
TCF4-250ENST00000625849 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
TCF4-250ENST00000625849 RIOK3O14730 519 aaKnown RBP13.94□□□□□ -0.18
TCF4-250ENST00000625849 RNF166Q96A37 237 aaPredicted RBP13.91□□□□□ -0.18
TCF4-250ENST00000625849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.9□□□□□ -0.18
TCF4-250ENST00000625849 ZFP91Q96JP5 570 aaPredicted RBP13.9□□□□□ -0.18
TCF4-250ENST00000625849 MS4A4AQ96JQ5 239 aa13.9□□□□□ -0.18
TCF4-250ENST00000625849 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms