RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
VPS8-227ENST00000625842 MYH16Q9H6N6 1097 aa14.87□□□□□ -0.03
VPS8-227ENST00000625842 CFAP53Q96M91 514 aa14.87□□□□□ -0.03
VPS8-227ENST00000625842 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS8-227ENST00000625842 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.86□□□□□ -0.03
VPS8-227ENST00000625842 CHIC2Q9UKJ5 165 aa14.84□□□□□ -0.03
VPS8-227ENST00000625842 MLECQ14165 292 aa14.83□□□□□ -0.03
VPS8-227ENST00000625842 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.04
VPS8-227ENST00000625842 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
VPS8-227ENST00000625842 EID1Q9Y6B2 187 aa14.79□□□□□ -0.04
VPS8-227ENST00000625842 TMC1Q8TDI8 760 aa14.79□□□□□ -0.04
VPS8-227ENST00000625842 KIF27Q86VH2 1401 aa14.77□□□□□ -0.04
VPS8-227ENST00000625842 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.04
VPS8-227ENST00000625842 HRCP23327 699 aa14.76□□□□□ -0.05
VPS8-227ENST00000625842 HSP90AA1P07900 732 aaKnown RBP14.75□□□□□ -0.05
VPS8-227ENST00000625842 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
VPS8-227ENST00000625842 CCDC9Q9Y3X0 531 aaKnown RBP14.75□□□□□ -0.05
VPS8-227ENST00000625842 CLIP1P30622 1438 aa14.75□□□□□ -0.05
VPS8-227ENST00000625842 NUDCQ9Y266 331 aa14.74□□□□□ -0.05
VPS8-227ENST00000625842 EIF5BO60841 1220 aaKnown RBP14.73□□□□□ -0.05
VPS8-227ENST00000625842 GOLGA2Q08379 1002 aa14.73□□□□□ -0.05
VPS8-227ENST00000625842 PNNQ9H307 717 aaKnown RBP14.73□□□□□ -0.05
VPS8-227ENST00000625842 CHMP4AQ9BY43 222 aa14.72□□□□□ -0.05
VPS8-227ENST00000625842 EEA1Q15075 1411 aa14.71□□□□□ -0.05
VPS8-227ENST00000625842 EFCAB2Q5VUJ9 269 aa14.7□□□□□ -0.06
VPS8-227ENST00000625842 ZCCHC6Q5VYS8 1495 aaKnown RBP14.68□□□□□ -0.06
VPS8-227ENST00000625842 SENP3Q9H4L4 574 aaPredicted RBP14.67□□□□□ -0.06
VPS8-227ENST00000625842 WRNQ14191 1432 aaPredicted RBP eCLIP14.67□□□□□ -0.06
VPS8-227ENST00000625842 ANP32BQ92688 251 aaKnown RBP14.67□□□□□ -0.06
VPS8-227ENST00000625842 CSB-PGBD3P0DP91 1061 aa14.65□□□□□ -0.06
VPS8-227ENST00000625842 DIEXFQ68CQ4 756 aaKnown RBP14.64□□□□□ -0.07
VPS8-227ENST00000625842 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
VPS8-227ENST00000625842 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
VPS8-227ENST00000625842 MAPK8IP3Q9UPT6 1336 aa14.63□□□□□ -0.07
VPS8-227ENST00000625842 GGT6Q6P531 493 aa14.62□□□□□ -0.07
VPS8-227ENST00000625842 CECR2Q9BXF3 1484 aa14.62□□□□□ -0.07
VPS8-227ENST00000625842 MEX3CQ5U5Q3 659 aaKnown RBP14.62□□□□□ -0.07
VPS8-227ENST00000625842 RGL3Q3MIN7 710 aa14.61□□□□□ -0.07
VPS8-227ENST00000625842 PPM1GO15355 546 aaPredicted RBP14.61□□□□□ -0.07
VPS8-227ENST00000625842 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
VPS8-227ENST00000625842 PHF23Q9BUL5 403 aaPredicted RBP14.58□□□□□ -0.08
VPS8-227ENST00000625842 CYB5RLQ6IPT4 315 aa14.57□□□□□ -0.08
VPS8-227ENST00000625842 RRP7BPQ9NSQ0 103 aa14.57□□□□□ -0.08
VPS8-227ENST00000625842 G3V3G9 751 aa14.54□□□□□ -0.08
VPS8-227ENST00000625842 DCAF8Q5TAQ9 597 aa14.54□□□□□ -0.08
VPS8-227ENST00000625842 RSPH4AQ5TD94 716 aa14.53□□□□□ -0.08
VPS8-227ENST00000625842 HDGFL2Q7Z4V5 671 aaPredicted RBP14.53□□□□□ -0.08
VPS8-227ENST00000625842 FHAD1B1AJZ9 1412 aa14.52□□□□□ -0.09
VPS8-227ENST00000625842 HMGB2P26583 209 aaKnown RBP14.52□□□□□ -0.09
VPS8-227ENST00000625842 SRPK2P78362 688 aaKnown RBP14.5□□□□□ -0.09
VPS8-227ENST00000625842 PAK3O75914 559 aaPredicted RBP14.5□□□□□ -0.09
VPS8-227ENST00000625842 CASC1Q6TDU7 716 aa14.5□□□□□ -0.09
VPS8-227ENST00000625842 CEP164Q9UPV0 1460 aa14.49□□□□□ -0.09
VPS8-227ENST00000625842 BAZ1AQ9NRL2 1556 aaPredicted RBP14.49□□□□□ -0.09
VPS8-227ENST00000625842 RTF1Q92541 710 aaKnown RBP14.49□□□□□ -0.09
VPS8-227ENST00000625842 MS4A1P11836 297 aa14.48□□□□□ -0.09
VPS8-227ENST00000625842 SF3B2Q13435 895 aaKnown RBP14.48□□□□□ -0.09
VPS8-227ENST00000625842 HDAC5Q9UQL6 1122 aa14.48□□□□□ -0.09
VPS8-227ENST00000625842 ANP32AP39687 249 aaKnown RBP14.47□□□□□ -0.09
VPS8-227ENST00000625842 ANO8Q9HCE9 1232 aaPredicted RBP14.47□□□□□ -0.09
VPS8-227ENST00000625842 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
VPS8-227ENST00000625842 EIF4G1Q04637 1599 aaKnown RBP14.46□□□□□ -0.09
VPS8-227ENST00000625842 ZRSR1Q15695 479 aaKnown RBP14.46□□□□□ -0.09
VPS8-227ENST00000625842 WASHC2AQ641Q2 1341 aa14.46□□□□□ -0.1
VPS8-227ENST00000625842 CARMIL1Q5VZK9 1371 aa14.45□□□□□ -0.1
VPS8-227ENST00000625842 OS9Q13438 667 aaPredicted RBP14.45□□□□□ -0.1
VPS8-227ENST00000625842 CARD11Q9BXL7 1154 aa14.44□□□□□ -0.1
VPS8-227ENST00000625842 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
VPS8-227ENST00000625842 NCLP19338 710 aaKnown RBP14.42□□□□□ -0.1
VPS8-227ENST00000625842 WASHC2CQ9Y4E1 1318 aa14.42□□□□□ -0.1
VPS8-227ENST00000625842 GTF2E1P29083 439 aaPredicted RBP14.42□□□□□ -0.1
VPS8-227ENST00000625842 SOGA1O94964 1423 aa14.41□□□□□ -0.1
VPS8-227ENST00000625842 NGDNQ8NEJ9 315 aaKnown RBP14.41□□□□□ -0.1
VPS8-227ENST00000625842 CUX2O14529 1486 aa14.4□□□□□ -0.1
VPS8-227ENST00000625842 EVA1CP58658 441 aa14.4□□□□□ -0.1
VPS8-227ENST00000625842 FAM9BQ8IZU0 186 aa14.4□□□□□ -0.1
VPS8-227ENST00000625842 ISY1Q9ULR0 285 aaKnown RBP14.4□□□□□ -0.1
VPS8-227ENST00000625842 CEP162Q5TB80 1403 aa14.4□□□□□ -0.1
VPS8-227ENST00000625842 TMF1P82094 1093 aa14.4□□□□□ -0.1
VPS8-227ENST00000625842 CALD1Q05682 793 aaKnown RBP14.39□□□□□ -0.11
VPS8-227ENST00000625842 SPAG9O60271 1321 aaKnown RBP14.39□□□□□ -0.11
VPS8-227ENST00000625842 MRS2Q9HD23 443 aa14.38□□□□□ -0.11
VPS8-227ENST00000625842 SALL2Q9Y467 1007 aaPredicted RBP14.37□□□□□ -0.11
VPS8-227ENST00000625842 MSH5O43196 834 aa14.37□□□□□ -0.11
VPS8-227ENST00000625842 FTSJ3Q8IY81 847 aaKnown RBP14.36□□□□□ -0.11
VPS8-227ENST00000625842 FAM69CQ0P6D2 419 aa14.36□□□□□ -0.11
VPS8-227ENST00000625842 FGD1P98174 961 aa14.36□□□□□ -0.11
VPS8-227ENST00000625842 KIF3BO15066 747 aa14.35□□□□□ -0.11
VPS8-227ENST00000625842 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
VPS8-227ENST00000625842 U2SURPO15042 1029 aaKnown RBP14.35□□□□□ -0.11
VPS8-227ENST00000625842 JPH4Q96JJ6 628 aa14.35□□□□□ -0.11
VPS8-227ENST00000625842 LAS1LQ9Y4W2 734 aaKnown RBP14.35□□□□□ -0.11
VPS8-227ENST00000625842 SOX12O15370 315 aa14.34□□□□□ -0.11
VPS8-227ENST00000625842 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS8-227ENST00000625842 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
VPS8-227ENST00000625842 TULP1O00294 542 aaPredicted RBP14.33□□□□□ -0.12
VPS8-227ENST00000625842 TERF2IPQ9NYB0 399 aa14.32□□□□□ -0.12
VPS8-227ENST00000625842 ATF3P18847 181 aa14.32□□□□□ -0.12
VPS8-227ENST00000625842 STK26Q9P289 416 aa14.32□□□□□ -0.12
VPS8-227ENST00000625842 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms