RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-222ENST00000625672 TSPY10P0CW01 314 aa18.37■□□□□ 0.53
NRXN1-222ENST00000625672 TAOK2Q9UL54 1235 aa18.35■□□□□ 0.53
NRXN1-222ENST00000625672 DDX10Q13206 875 aaKnown RBP18.35■□□□□ 0.53
NRXN1-222ENST00000625672 TPRNQ4KMQ1 711 aa18.34■□□□□ 0.53
NRXN1-222ENST00000625672 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
NRXN1-222ENST00000625672 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
NRXN1-222ENST00000625672 PPM1GO15355 546 aaPredicted RBP18.29■□□□□ 0.52
NRXN1-222ENST00000625672 CHMP7Q8WUX9 453 aaPredicted RBP18.28■□□□□ 0.52
NRXN1-222ENST00000625672 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
NRXN1-222ENST00000625672 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
NRXN1-222ENST00000625672 MRS2Q9HD23 443 aa18.25■□□□□ 0.51
NRXN1-222ENST00000625672 CLSTN1O94985 981 aa18.25■□□□□ 0.51
NRXN1-222ENST00000625672 TRIM44Q96DX7 344 aaPredicted RBP18.25■□□□□ 0.51
NRXN1-222ENST00000625672 GOLGA6L22H0YM25 854 aa18.23■□□□□ 0.51
NRXN1-222ENST00000625672 GOLGA2Q08379 1002 aa18.23■□□□□ 0.51
NRXN1-222ENST00000625672 BECN1Q14457 450 aa18.22■□□□□ 0.51
NRXN1-222ENST00000625672 ACIN1Q9UKV3 1341 aaKnown RBP18.22■□□□□ 0.51
NRXN1-222ENST00000625672 PTMAP06454 111 aaKnown RBP18.21■□□□□ 0.51
NRXN1-222ENST00000625672 LAS1LQ9Y4W2 734 aaKnown RBP18.19■□□□□ 0.5
NRXN1-222ENST00000625672 CFAP53Q96M91 514 aa18.17■□□□□ 0.5
NRXN1-222ENST00000625672 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
NRXN1-222ENST00000625672 DNTTIP2Q5QJE6 756 aaKnown RBP18.15■□□□□ 0.5
NRXN1-222ENST00000625672 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.5
NRXN1-222ENST00000625672 NAP1L2Q9ULW6 460 aaPredicted RBP18.14■□□□□ 0.49
NRXN1-222ENST00000625672 MTUS2Q5JR59 1369 aa18.14■□□□□ 0.49
NRXN1-222ENST00000625672 OS9Q13438 667 aaPredicted RBP18.13■□□□□ 0.49
NRXN1-222ENST00000625672 FGD1P98174 961 aa18.12■□□□□ 0.49
NRXN1-222ENST00000625672 ISY1Q9ULR0 285 aaKnown RBP18.12■□□□□ 0.49
NRXN1-222ENST00000625672 RGL3Q3MIN7 710 aa18.11■□□□□ 0.49
NRXN1-222ENST00000625672 DDRGK1Q96HY6 314 aa18.09■□□□□ 0.49
NRXN1-222ENST00000625672 TNNT2P45379 298 aaPredicted RBP18.07■□□□□ 0.48
NRXN1-222ENST00000625672 TRHP20396 242 aaPredicted RBP18.07■□□□□ 0.48
NRXN1-222ENST00000625672 PLCB2Q00722 1185 aa18.06■□□□□ 0.48
NRXN1-222ENST00000625672 ANP32EQ9BTT0 268 aa18.06■□□□□ 0.48
NRXN1-222ENST00000625672 HIRIP3Q9BW71 556 aaPredicted RBP18.06■□□□□ 0.48
NRXN1-222ENST00000625672 MAPK8IP3Q9UPT6 1336 aa18.06■□□□□ 0.48
NRXN1-222ENST00000625672 POGKQ9P215 609 aa18.05■□□□□ 0.48
NRXN1-222ENST00000625672 KCNJ4P48050 445 aa18.05■□□□□ 0.48
NRXN1-222ENST00000625672 GOLGA6L6A8MZA4 724 aa18.04■□□□□ 0.48
NRXN1-222ENST00000625672 RRP7BPQ9NSQ0 103 aa18.04■□□□□ 0.48
NRXN1-222ENST00000625672 KNSTRNQ9Y448 316 aa18.03■□□□□ 0.48
NRXN1-222ENST00000625672 NEUROD2Q15784 382 aa18.03■□□□□ 0.48
NRXN1-222ENST00000625672 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.47
NRXN1-222ENST00000625672 SENP3-EIF4A1A0A087X0R7 540 aa18■□□□□ 0.47
NRXN1-222ENST00000625672 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
NRXN1-222ENST00000625672 CDCA8Q53HL2 280 aa17.99■□□□□ 0.47
NRXN1-222ENST00000625672 PLEKHD1A6NEE1 506 aa17.99■□□□□ 0.47
NRXN1-222ENST00000625672 PRM3Q9NNZ6 103 aa17.98■□□□□ 0.47
NRXN1-222ENST00000625672 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
NRXN1-222ENST00000625672 SOX12O15370 315 aa17.94■□□□□ 0.46
NRXN1-222ENST00000625672 NRDCO43847 1150 aa17.92■□□□□ 0.46
NRXN1-222ENST00000625672 U2SURPO15042 1029 aaKnown RBP17.9■□□□□ 0.46
NRXN1-222ENST00000625672 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
NRXN1-222ENST00000625672 HSP90AB1P08238 724 aaKnown RBP17.9■□□□□ 0.46
NRXN1-222ENST00000625672 TMX4Q9H1E5 349 aaPredicted RBP17.9■□□□□ 0.46
NRXN1-222ENST00000625672 GOLGA6L4A6NEF3 574 aa17.89■□□□□ 0.45
NRXN1-222ENST00000625672 MLECQ14165 292 aa17.88■□□□□ 0.45
NRXN1-222ENST00000625672 GNL2Q13823 731 aaKnown RBP17.87■□□□□ 0.45
NRXN1-222ENST00000625672 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
NRXN1-222ENST00000625672 PNNQ9H307 717 aaKnown RBP17.85■□□□□ 0.45
NRXN1-222ENST00000625672 CARD11Q9BXL7 1154 aa17.84■□□□□ 0.45
NRXN1-222ENST00000625672 ZNF330Q9Y3S2 320 aaPredicted RBP17.82■□□□□ 0.44
NRXN1-222ENST00000625672 KIAA2012Q0VF49 1180 aa17.82■□□□□ 0.44
NRXN1-222ENST00000625672 RGS3P49796 1198 aa17.81■□□□□ 0.44
NRXN1-222ENST00000625672 CFDP1Q9UEE9 299 aaPredicted RBP17.81■□□□□ 0.44
NRXN1-222ENST00000625672 CCDC9Q9Y3X0 531 aaKnown RBP17.81■□□□□ 0.44
NRXN1-222ENST00000625672 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
NRXN1-222ENST00000625672 NAP1L5Q96NT1 182 aaPredicted RBP17.8■□□□□ 0.44
NRXN1-222ENST00000625672 HDGFP51858 240 aaKnown RBP17.8■□□□□ 0.44
NRXN1-222ENST00000625672 DRC7Q8IY82 874 aa17.79■□□□□ 0.44
NRXN1-222ENST00000625672 L1TD1Q5T7N2 865 aaKnown RBP17.79■□□□□ 0.44
NRXN1-222ENST00000625672 CC2D1BQ5T0F9 858 aaKnown RBP17.78■□□□□ 0.44
NRXN1-222ENST00000625672 NOC3LQ8WTT2 800 aaKnown RBP17.77■□□□□ 0.44
NRXN1-222ENST00000625672 RTF1Q92541 710 aaKnown RBP17.77■□□□□ 0.43
NRXN1-222ENST00000625672 MCCP23508 829 aa17.77■□□□□ 0.43
NRXN1-222ENST00000625672 G3V3G9 751 aa17.76■□□□□ 0.43
NRXN1-222ENST00000625672 DCAF8Q5TAQ9 597 aa17.76■□□□□ 0.43
NRXN1-222ENST00000625672 MS4A1P11836 297 aa17.76■□□□□ 0.43
NRXN1-222ENST00000625672 PAK3O75914 559 aaPredicted RBP17.76■□□□□ 0.43
NRXN1-222ENST00000625672 CHAF1AQ13111 956 aaPredicted RBP17.76■□□□□ 0.43
NRXN1-222ENST00000625672 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
NRXN1-222ENST00000625672 CSB-PGBD3P0DP91 1061 aa17.75■□□□□ 0.43
NRXN1-222ENST00000625672 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
NRXN1-222ENST00000625672 PDE4CQ08493 712 aa17.72■□□□□ 0.43
NRXN1-222ENST00000625672 AMER1Q5JTC6 1135 aaPredicted RBP17.72■□□□□ 0.43
NRXN1-222ENST00000625672 SAFB2Q14151 953 aaKnown RBP eCLIP17.72■□□□□ 0.43
NRXN1-222ENST00000625672 ERICH6BQ5W0A0 696 aa17.7■□□□□ 0.42
NRXN1-222ENST00000625672 KANK1Q14678 1352 aa17.69■□□□□ 0.42
NRXN1-222ENST00000625672 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
NRXN1-222ENST00000625672 HSCBQ8IWL3 235 aa17.69■□□□□ 0.42
NRXN1-222ENST00000625672 KRI1Q8N9T8 703 aaKnown RBP17.69■□□□□ 0.42
NRXN1-222ENST00000625672 MIER1Q8N108 512 aa17.68■□□□□ 0.42
NRXN1-222ENST00000625672 KIAA1211Q6ZU35 1233 aa17.66■□□□□ 0.42
NRXN1-222ENST00000625672 APBB1O00213 710 aa17.66■□□□□ 0.42
NRXN1-222ENST00000625672 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.66■□□□□ 0.42
NRXN1-222ENST00000625672 SUPT16HQ9Y5B9 1047 aaKnown RBP17.65■□□□□ 0.42
NRXN1-222ENST00000625672 CLIP1P30622 1438 aa17.65■□□□□ 0.42
NRXN1-222ENST00000625672 CHMP3Q9Y3E7 222 aa17.64■□□□□ 0.42
NRXN1-222ENST00000625672 GORABQ5T7V8 394 aa17.64■□□□□ 0.41
NRXN1-222ENST00000625672 SPRYD3Q8NCJ5 442 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms