RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	PELP1	Q8IZL8	1130 aa	Known RBP	14.8	□□□□□ -0.04
LINC02028-223	ENST00000625668	ASTL	Q6HA08	431 aa	Predicted RBP	14.79	□□□□□ -0.04
LINC02028-223	ENST00000625668	RASEF	Q8IZ41	740 aa		14.78	□□□□□ -0.04
LINC02028-223	ENST00000625668	PLCD3	Q8N3E9	789 aa		14.77	□□□□□ -0.05
LINC02028-223	ENST00000625668	KIF12	Q96FN5	646 aa		14.77	□□□□□ -0.05
LINC02028-223	ENST00000625668	POTEB2	H3BUK9	544 aa		14.74	□□□□□ -0.05
LINC02028-223	ENST00000625668	ATMIN	O43313	823 aa	Predicted RBP	14.74	□□□□□ -0.05
LINC02028-223	ENST00000625668	ZBTB47	Q9UFB7	747 aa	Predicted RBP	14.69	□□□□□ -0.06
LINC02028-223	ENST00000625668	OTUD5	Q96G74	571 aa		14.68	□□□□□ -0.06
LINC02028-223	ENST00000625668	MAP3K13	O43283	966 aa		14.66	□□□□□ -0.06
LINC02028-223	ENST00000625668	NUBP1	P53384	320 aa		14.66	□□□□□ -0.06
LINC02028-223	ENST00000625668	SLC39A7	Q92504	469 aa		14.66	□□□□□ -0.06
LINC02028-223	ENST00000625668	C7	P10643	843 aa		14.65	□□□□□ -0.06
LINC02028-223	ENST00000625668	METRN	Q9UJH8	293 aa		14.65	□□□□□ -0.06
LINC02028-223	ENST00000625668	ATN1	P54259	1190 aa	Predicted RBP	14.62	□□□□□ -0.07
LINC02028-223	ENST00000625668	TRPC6	Q9Y210	931 aa		14.62	□□□□□ -0.07
LINC02028-223	ENST00000625668	BMP2K	Q9NSY1	1161 aa	Predicted RBP	14.6	□□□□□ -0.07
LINC02028-223	ENST00000625668	TIE1	P35590	1138 aa		14.57	□□□□□ -0.08
LINC02028-223	ENST00000625668	SGIP1	Q9BQI5	828 aa		14.56	□□□□□ -0.08
LINC02028-223	ENST00000625668	FBXO3	Q9UK99	471 aa		14.55	□□□□□ -0.08
LINC02028-223	ENST00000625668	CCDC180	Q9P1Z9	1646 aa		14.55	□□□□□ -0.08
LINC02028-223	ENST00000625668	POTEJ	P0CG39	1038 aa		14.53	□□□□□ -0.08
LINC02028-223	ENST00000625668	FAM212A	Q96EL1	285 aa		14.51	□□□□□ -0.09
LINC02028-223	ENST00000625668	PCDHB13	Q9Y5F0	798 aa		14.5	□□□□□ -0.09
LINC02028-223	ENST00000625668	TTLL13P	A6NNM8	815 aa		14.49	□□□□□ -0.09
LINC02028-223	ENST00000625668	POTEF	A5A3E0	1075 aa		14.48	□□□□□ -0.09
LINC02028-223	ENST00000625668	IFNL1	Q8IU54	200 aa		14.44	□□□□□ -0.1
LINC02028-223	ENST00000625668	MAMSTR	Q6ZN01	415 aa		14.43	□□□□□ -0.1
LINC02028-223	ENST00000625668	VASP	P50552	380 aa	Predicted RBP	14.38	□□□□□ -0.11
LINC02028-223	ENST00000625668	TRIM35	Q9UPQ4	493 aa		14.38	□□□□□ -0.11
LINC02028-223	ENST00000625668	DCAF8	Q5TAQ9	597 aa		14.37	□□□□□ -0.11
LINC02028-223	ENST00000625668	COLQ	Q9Y215	455 aa	Predicted RBP	14.37	□□□□□ -0.11
LINC02028-223	ENST00000625668	IER5L	Q5T953	404 aa		14.36	□□□□□ -0.11
LINC02028-223	ENST00000625668	SCUBE2	Q9NQ36	999 aa		14.35	□□□□□ -0.11
LINC02028-223	ENST00000625668	SEC24B	O95487	1268 aa		14.32	□□□□□ -0.12
LINC02028-223	ENST00000625668	PYGB	P11216	843 aa		14.32	□□□□□ -0.12
LINC02028-223	ENST00000625668	TMEM106C	Q9BVX2	250 aa		14.32	□□□□□ -0.12
LINC02028-223	ENST00000625668	KLHL34	Q8N239	644 aa		14.28	□□□□□ -0.12
LINC02028-223	ENST00000625668	POTEM	A6NI47	508 aa		14.25	□□□□□ -0.13
LINC02028-223	ENST00000625668	GSE1	Q14687	1217 aa		14.23	□□□□□ -0.13
LINC02028-223	ENST00000625668	ABCC9	O60706	1549 aa		14.22	□□□□□ -0.13
LINC02028-223	ENST00000625668	POTEG	Q6S5H5	508 aa		14.22	□□□□□ -0.13
LINC02028-223	ENST00000625668	PCDHB8	Q9UN66	801 aa		14.22	□□□□□ -0.13
LINC02028-223	ENST00000625668	IRX5	P78411	483 aa	Predicted RBP	14.19	□□□□□ -0.14
LINC02028-223	ENST00000625668	LCE2D	Q5TA82	110 aa	Predicted RBP	14.19	□□□□□ -0.14
LINC02028-223	ENST00000625668	CHRM1	P11229	460 aa	Predicted RBP	14.17	□□□□□ -0.14
LINC02028-223	ENST00000625668	PLCG2	P16885	1265 aa		14.16	□□□□□ -0.14
LINC02028-223	ENST00000625668	ZNF467	Q7Z7K2	595 aa	Predicted RBP	14.13	□□□□□ -0.15
LINC02028-223	ENST00000625668	IFNLR1	Q8IU57	520 aa	Predicted RBP	14.13	□□□□□ -0.15
LINC02028-223	ENST00000625668	FAM163A	Q96GL9	167 aa	Predicted RBP	14.13	□□□□□ -0.15
LINC02028-223	ENST00000625668	OCEL1	Q9H607	264 aa		14.11	□□□□□ -0.15
LINC02028-223	ENST00000625668	PLSCR2	Q9NRY7	297 aa		14.11	□□□□□ -0.15
LINC02028-223	ENST00000625668	SPOCK2	Q92563	424 aa		14.08	□□□□□ -0.16
LINC02028-223	ENST00000625668	PCDH10	Q9P2E7	1040 aa		14.06	□□□□□ -0.16
LINC02028-223	ENST00000625668	SLAIN1	Q8ND83	568 aa		14.04	□□□□□ -0.16
LINC02028-223	ENST00000625668	PSEN1	P49768	467 aa		14	□□□□□ -0.17
LINC02028-223	ENST00000625668	PDCD7	Q8N8D1	485 aa	Known RBP	13.99	□□□□□ -0.17
LINC02028-223	ENST00000625668	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.98	□□□□□ -0.17
LINC02028-223	ENST00000625668	MKRN3	Q13064	507 aa	Known RBP	13.96	□□□□□ -0.17
LINC02028-223	ENST00000625668	GOLGA2	Q08379	1002 aa		13.94	□□□□□ -0.18
LINC02028-223	ENST00000625668	PDAP1	Q13442	181 aa	Known RBP	13.94	□□□□□ -0.18
LINC02028-223	ENST00000625668	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.91	□□□□□ -0.18
LINC02028-223	ENST00000625668	ST18	O60284	1047 aa		13.9	□□□□□ -0.18
LINC02028-223	ENST00000625668	ILDR1	Q86SU0	546 aa	Predicted RBP	13.9	□□□□□ -0.18
LINC02028-223	ENST00000625668	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
LINC02028-223	ENST00000625668	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.87	□□□□□ -0.19
LINC02028-223	ENST00000625668	TRIM41	Q8WV44	630 aa		13.84	□□□□□ -0.19
LINC02028-223	ENST00000625668	CABP2	Q9NPB3	220 aa		13.82	□□□□□ -0.2
LINC02028-223	ENST00000625668	SNPH	O15079	494 aa		13.81	□□□□□ -0.2
LINC02028-223	ENST00000625668	C3orf67	Q6ZVT6	689 aa		13.8	□□□□□ -0.2
LINC02028-223	ENST00000625668	CDAN1	Q8IWY9	1227 aa		13.79	□□□□□ -0.2
LINC02028-223	ENST00000625668	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC02028-223	ENST00000625668	DPY19L2	Q6NUT2	758 aa		13.77	□□□□□ -0.21
LINC02028-223	ENST00000625668	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.71	□□□□□ -0.21
LINC02028-223	ENST00000625668	BOLA1	Q9Y3E2	137 aa		13.69	□□□□□ -0.22
LINC02028-223	ENST00000625668	RB1CC1	Q8TDY2	1594 aa		13.67	□□□□□ -0.22
LINC02028-223	ENST00000625668	EFCAB3	Q8N7B9	438 aa		13.67	□□□□□ -0.22
LINC02028-223	ENST00000625668	DCAF8L2	P0C7V8	631 aa		13.66	□□□□□ -0.22
LINC02028-223	ENST00000625668	RNF25	Q96BH1	459 aa	Predicted RBP	13.66	□□□□□ -0.22
LINC02028-223	ENST00000625668	NACAD	O15069	1562 aa		13.66	□□□□□ -0.22
LINC02028-223	ENST00000625668	MARVELD3	Q96A59	401 aa		13.65	□□□□□ -0.22
LINC02028-223	ENST00000625668	RIOK3	O14730	519 aa	Known RBP	13.64	□□□□□ -0.23
LINC02028-223	ENST00000625668		G3V3G9	751 aa		13.62	□□□□□ -0.23
LINC02028-223	ENST00000625668	MYO15B	Q96JP2	1530 aa		13.6	□□□□□ -0.23
LINC02028-223	ENST00000625668	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC02028-223	ENST00000625668	VGF	O15240	615 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC02028-223	ENST00000625668	ZFP91	Q96JP5	570 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC02028-223	ENST00000625668	DCAF1	Q9Y4B6	1507 aa		13.57	□□□□□ -0.24
LINC02028-223	ENST00000625668	SOX12	O15370	315 aa		13.56	□□□□□ -0.24
LINC02028-223	ENST00000625668	HOXB3	P14651	431 aa	Predicted RBP	13.55	□□□□□ -0.24
LINC02028-223	ENST00000625668	EMP3	P54852	163 aa		13.54	□□□□□ -0.24
LINC02028-223	ENST00000625668	MS4A4A	Q96JQ5	239 aa		13.51	□□□□□ -0.25
LINC02028-223	ENST00000625668	POTEB3	A0JP26	581 aa		13.49	□□□□□ -0.25
LINC02028-223	ENST00000625668	POTEB	Q6S5H4	581 aa		13.49	□□□□□ -0.25
LINC02028-223	ENST00000625668	MICALL2	Q8IY33	904 aa		13.49	□□□□□ -0.25
LINC02028-223	ENST00000625668	PHF8	Q9UPP1	1060 aa		13.48	□□□□□ -0.25
LINC02028-223	ENST00000625668	SPNS2	Q8IVW8	549 aa		13.47	□□□□□ -0.25
LINC02028-223	ENST00000625668	HS3ST6	Q96QI5	342 aa		13.47	□□□□□ -0.25
LINC02028-223	ENST00000625668	FAM205C	A6NFA0	338 aa		13.46	□□□□□ -0.25
LINC02028-223	ENST00000625668	TMEM92	Q6UXU6	159 aa		13.45	□□□□□ -0.26

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