RNA–Protein interactions for RNA: ENST00000623316.1

ATRX-210, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 803 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-210ENST00000623316 NBR1Q14596 966 aa12.25□□□□□ -0.45
ATRX-210ENST00000623316 NUBP1P53384 320 aa12.24□□□□□ -0.45
ATRX-210ENST00000623316 DNAJC5Q9H3Z4 198 aa12.23□□□□□ -0.45
ATRX-210ENST00000623316 RIOK3O14730 519 aaKnown RBP12.21□□□□□ -0.45
ATRX-210ENST00000623316 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
ATRX-210ENST00000623316 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
ATRX-210ENST00000623316 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
ATRX-210ENST00000623316 FAM212AQ96EL1 285 aa12.16□□□□□ -0.46
ATRX-210ENST00000623316 STK25O00506 426 aa12.14□□□□□ -0.47
ATRX-210ENST00000623316 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
ATRX-210ENST00000623316 VGFO15240 615 aaPredicted RBP12.12□□□□□ -0.47
ATRX-210ENST00000623316 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
ATRX-210ENST00000623316 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
ATRX-210ENST00000623316 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
ATRX-210ENST00000623316 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
ATRX-210ENST00000623316 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
ATRX-210ENST00000623316 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
ATRX-210ENST00000623316 MNX1P50219 401 aaPredicted RBP12.05□□□□□ -0.48
ATRX-210ENST00000623316 RASEFQ8IZ41 740 aa12.03□□□□□ -0.48
ATRX-210ENST00000623316 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
ATRX-210ENST00000623316 BCL11BQ9C0K0 894 aaPredicted RBP12.02□□□□□ -0.49
ATRX-210ENST00000623316 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.01□□□□□ -0.49
ATRX-210ENST00000623316 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
ATRX-210ENST00000623316 RYDENQ9NUL5 291 aaKnown RBP12.01□□□□□ -0.49
ATRX-210ENST00000623316 SGIP1Q9BQI5 828 aa12□□□□□ -0.49
ATRX-210ENST00000623316 PYGBP11216 843 aa11.98□□□□□ -0.49
ATRX-210ENST00000623316 REM2Q8IYK8 340 aaPredicted RBP11.98□□□□□ -0.49
ATRX-210ENST00000623316 P3H3Q8IVL6 736 aa11.85□□□□□ -0.51
ATRX-210ENST00000623316 PITPNM1O00562 1244 aa11.84□□□□□ -0.51
ATRX-210ENST00000623316 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
ATRX-210ENST00000623316 WDR70Q9NW82 654 aa11.81□□□□□ -0.52
ATRX-210ENST00000623316 TSPYL2Q9H2G4 693 aaPredicted RBP11.8□□□□□ -0.52
ATRX-210ENST00000623316 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
ATRX-210ENST00000623316 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
ATRX-210ENST00000623316 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
ATRX-210ENST00000623316 KCNV2Q8TDN2 545 aa11.72□□□□□ -0.53
ATRX-210ENST00000623316 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
ATRX-210ENST00000623316 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
ATRX-210ENST00000623316 GTF3C3Q9Y5Q9 886 aa11.71□□□□□ -0.53
ATRX-210ENST00000623316 FARP1Q9Y4F1 1045 aaPredicted RBP11.69□□□□□ -0.54
ATRX-210ENST00000623316 TULP1O00294 542 aaPredicted RBP11.68□□□□□ -0.54
ATRX-210ENST00000623316 PSEN1P49768 467 aa11.67□□□□□ -0.54
ATRX-210ENST00000623316 TIMELESSQ9UNS1 1208 aa11.67□□□□□ -0.54
ATRX-210ENST00000623316 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
ATRX-210ENST00000623316 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
ATRX-210ENST00000623316 CCDC180Q9P1Z9 1646 aa11.65□□□□□ -0.54
ATRX-210ENST00000623316 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.65□□□□□ -0.54
ATRX-210ENST00000623316 TMEM132AQ24JP5 1023 aa11.64□□□□□ -0.55
ATRX-210ENST00000623316 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
ATRX-210ENST00000623316 CCDC61Q9Y6R9 512 aa11.62□□□□□ -0.55
ATRX-210ENST00000623316 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
ATRX-210ENST00000623316 ERICH6Q7L0X2 663 aa11.57□□□□□ -0.56
ATRX-210ENST00000623316 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
ATRX-210ENST00000623316 PAK3O75914 559 aaPredicted RBP11.56□□□□□ -0.56
ATRX-210ENST00000623316 NLRP6P59044 892 aa11.56□□□□□ -0.56
ATRX-210ENST00000623316 PPP1R37O75864 691 aa11.55□□□□□ -0.56
ATRX-210ENST00000623316 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
ATRX-210ENST00000623316 E2F4Q16254 413 aa11.54□□□□□ -0.56
ATRX-210ENST00000623316 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
ATRX-210ENST00000623316 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
ATRX-210ENST00000623316 SOX12O15370 315 aa11.52□□□□□ -0.57
ATRX-210ENST00000623316 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
ATRX-210ENST00000623316 PHF8Q9UPP1 1060 aa11.51□□□□□ -0.57
ATRX-210ENST00000623316 ABCC9O60706 1549 aa11.5□□□□□ -0.57
ATRX-210ENST00000623316 MAP3K13O43283 966 aa11.49□□□□□ -0.57
ATRX-210ENST00000623316 SEMA3EO15041 775 aa11.46□□□□□ -0.57
ATRX-210ENST00000623316 ZC3H15Q8WU90 426 aaKnown RBP11.46□□□□□ -0.57
ATRX-210ENST00000623316 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
ATRX-210ENST00000623316 TESPA1A2RU30 521 aaPredicted RBP11.44□□□□□ -0.58
ATRX-210ENST00000623316 FXR2P51116 673 aaKnown RBP eCLIP11.44□□□□□ -0.588e-10■■■■■ 39.5
ATRX-210ENST00000623316 BRPF1P55201 1214 aaPredicted RBP11.44□□□□□ -0.58
ATRX-210ENST00000623316 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
ATRX-210ENST00000623316 NCKAP5LQ9HCH0 1330 aa11.4□□□□□ -0.58
ATRX-210ENST00000623316 PDE4AP27815 886 aa11.4□□□□□ -0.58
ATRX-210ENST00000623316 C14orf37Q86TY3 774 aa11.4□□□□□ -0.58
ATRX-210ENST00000623316 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
ATRX-210ENST00000623316 SLC24A3Q9HC58 644 aa11.39□□□□□ -0.59
ATRX-210ENST00000623316 SMYD5Q6GMV2 418 aa11.38□□□□□ -0.59
ATRX-210ENST00000623316 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
ATRX-210ENST00000623316 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
ATRX-210ENST00000623316 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
ATRX-210ENST00000623316 MFSD10Q14728 455 aa11.34□□□□□ -0.59
ATRX-210ENST00000623316 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
ATRX-210ENST00000623316 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
ATRX-210ENST00000623316 ZMYND10O75800 440 aa11.3□□□□□ -0.6
ATRX-210ENST00000623316 PIP4P2Q8N4L2 257 aa11.3□□□□□ -0.6
ATRX-210ENST00000623316 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
ATRX-210ENST00000623316 CD44P16070 742 aaKnown RBP11.29□□□□□ -0.6
ATRX-210ENST00000623316 ARXQ96QS3 562 aa11.29□□□□□ -0.6
ATRX-210ENST00000623316 TMEM106CQ9BVX2 250 aa11.29□□□□□ -0.6
ATRX-210ENST00000623316 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
ATRX-210ENST00000623316 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
ATRX-210ENST00000623316 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
ATRX-210ENST00000623316 CAMK2BQ13554 666 aa11.26□□□□□ -0.61
ATRX-210ENST00000623316 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
ATRX-210ENST00000623316 GPIHBP1Q8IV16 184 aa11.2□□□□□ -0.62
ATRX-210ENST00000623316 PPP1R15BQ5SWA1 713 aa11.19□□□□□ -0.62
ATRX-210ENST00000623316 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
ATRX-210ENST00000623316 TRPC6Q9Y210 931 aa11.19□□□□□ -0.62
ATRX-210ENST00000623316 MLLT3P42568 568 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms