RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 CD44P16070 742 aaKnown RBP9.74□□□□□ -0.85
ATRX-209ENST00000623242 CLCN6P51797 869 aa9.73□□□□□ -0.85
ATRX-209ENST00000623242 RASEFQ8IZ41 740 aa9.73□□□□□ -0.85
ATRX-209ENST00000623242 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
ATRX-209ENST00000623242 GSE1Q14687 1217 aa9.7□□□□□ -0.86
ATRX-209ENST00000623242 DCAF8Q5TAQ9 597 aa9.7□□□□□ -0.86
ATRX-209ENST00000623242 GABBR2O75899 941 aa9.68□□□□□ -0.86
ATRX-209ENST00000623242 RNF25Q96BH1 459 aaPredicted RBP9.68□□□□□ -0.86
ATRX-209ENST00000623242 TRIM41Q8WV44 630 aa9.67□□□□□ -0.86
ATRX-209ENST00000623242 ZNF579Q8NAF0 562 aaKnown RBP9.66□□□□□ -0.86
ATRX-209ENST00000623242 FAM212AQ96EL1 285 aa9.65□□□□□ -0.86
ATRX-209ENST00000623242 ZRANB1Q9UGI0 708 aa9.65□□□□□ -0.86
ATRX-209ENST00000623242 PAK3O75914 559 aaPredicted RBP9.64□□□□□ -0.87
ATRX-209ENST00000623242 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
ATRX-209ENST00000623242 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
ATRX-209ENST00000623242 PYGBP11216 843 aa9.57□□□□□ -0.88
ATRX-209ENST00000623242 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
ATRX-209ENST00000623242 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
ATRX-209ENST00000623242 TSPYL2Q9H2G4 693 aaPredicted RBP9.56□□□□□ -0.88
ATRX-209ENST00000623242 RIOK3O14730 519 aaKnown RBP9.55□□□□□ -0.88
ATRX-209ENST00000623242 HS6ST3Q8IZP7 471 aa9.52□□□□□ -0.89
ATRX-209ENST00000623242 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
ATRX-209ENST00000623242 CCDC61Q9Y6R9 512 aa9.51□□□□□ -0.89
ATRX-209ENST00000623242 VGFO15240 615 aaPredicted RBP9.48□□□□□ -0.89
ATRX-209ENST00000623242 POTEIP0CG38 1075 aa9.48□□□□□ -0.89
ATRX-209ENST00000623242 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
ATRX-209ENST00000623242 DCBLD2Q96PD2 775 aa9.48□□□□□ -0.89
ATRX-209ENST00000623242 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
ATRX-209ENST00000623242 HAP1P54257 671 aaPredicted RBP9.47□□□□□ -0.89
ATRX-209ENST00000623242 DNAJC5Q9H3Z4 198 aa9.47□□□□□ -0.89
ATRX-209ENST00000623242 GALR2O43603 387 aaPredicted RBP9.46□□□□□ -0.9
ATRX-209ENST00000623242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.45□□□□□ -0.9
ATRX-209ENST00000623242 NKX1-1Q15270 411 aaPredicted RBP9.45□□□□□ -0.9
ATRX-209ENST00000623242 ZFP91Q96JP5 570 aaPredicted RBP9.45□□□□□ -0.9
ATRX-209ENST00000623242 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
ATRX-209ENST00000623242 SGIP1Q9BQI5 828 aa9.45□□□□□ -0.9
ATRX-209ENST00000623242 STK25O00506 426 aa9.43□□□□□ -0.9
ATRX-209ENST00000623242 SPRYD3Q8NCJ5 442 aa9.42□□□□□ -0.9
ATRX-209ENST00000623242 TAOK2Q9UL54 1235 aa9.42□□□□□ -0.9
ATRX-209ENST00000623242 PCDHB8Q9UN66 801 aa9.42□□□□□ -0.9
ATRX-209ENST00000623242 PCDHB13Q9Y5F0 798 aa9.42□□□□□ -0.9
ATRX-209ENST00000623242 BCL11BQ9C0K0 894 aaPredicted RBP9.41□□□□□ -0.9
ATRX-209ENST00000623242 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.9
ATRX-209ENST00000623242 KIF12Q96FN5 646 aa9.4□□□□□ -0.9
ATRX-209ENST00000623242 MAP3K13O43283 966 aa9.39□□□□□ -0.91
ATRX-209ENST00000623242 MS4A3Q96HJ5 214 aa9.38□□□□□ -0.91
ATRX-209ENST00000623242 STK24Q9Y6E0 443 aa9.38□□□□□ -0.91
ATRX-209ENST00000623242 IFNL1Q8IU54 200 aa9.37□□□□□ -0.91
ATRX-209ENST00000623242 GTPBP6O43824 516 aaPredicted RBP9.36□□□□□ -0.91
ATRX-209ENST00000623242 LHX8Q68G74 356 aa9.36□□□□□ -0.91
ATRX-209ENST00000623242 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
ATRX-209ENST00000623242 PDAP1Q13442 181 aaKnown RBP9.35□□□□□ -0.91
ATRX-209ENST00000623242 ASTLQ6HA08 431 aaPredicted RBP9.34□□□□□ -0.91
ATRX-209ENST00000623242 KDM2AQ9Y2K7 1162 aa9.34□□□□□ -0.91
ATRX-209ENST00000623242 PSEN1P49768 467 aa9.33□□□□□ -0.92
ATRX-209ENST00000623242 VSIG10Q8N0Z9 540 aa9.32□□□□□ -0.92
ATRX-209ENST00000623242 ATMINO43313 823 aaPredicted RBP9.29□□□□□ -0.92
ATRX-209ENST00000623242 TIE1P35590 1138 aa9.27□□□□□ -0.93
ATRX-209ENST00000623242 TRPC6Q9Y210 931 aa9.27□□□□□ -0.93
ATRX-209ENST00000623242 PELP1Q8IZL8 1130 aaKnown RBP9.25□□□□□ -0.93
ATRX-209ENST00000623242 SLC39A7Q92504 469 aa9.24□□□□□ -0.93
ATRX-209ENST00000623242 C7P10643 843 aa9.23□□□□□ -0.93
ATRX-209ENST00000623242 MFRPQ9BY79 579 aa9.23□□□□□ -0.93
ATRX-209ENST00000623242 BMP2KQ9NSY1 1161 aaPredicted RBP9.22□□□□□ -0.93
ATRX-209ENST00000623242 ATN1P54259 1190 aaPredicted RBP9.21□□□□□ -0.94
ATRX-209ENST00000623242 EFCAB3Q8N7B9 438 aa9.21□□□□□ -0.94
ATRX-209ENST00000623242 CABP2Q9NPB3 220 aa9.21□□□□□ -0.94
ATRX-209ENST00000623242 METRNQ9UJH8 293 aa9.19□□□□□ -0.94
ATRX-209ENST00000623242 FBXO22Q8NEZ5 403 aa9.18□□□□□ -0.94
ATRX-209ENST00000623242 RYDENQ9NUL5 291 aaKnown RBP9.18□□□□□ -0.94
ATRX-209ENST00000623242 TTLL13PA6NNM8 815 aa9.17□□□□□ -0.94
ATRX-209ENST00000623242 TMEM106CQ9BVX2 250 aa9.17□□□□□ -0.94
ATRX-209ENST00000623242 PHF8Q9UPP1 1060 aa9.16□□□□□ -0.94
ATRX-209ENST00000623242 PPP1R37O75864 691 aa9.15□□□□□ -0.94
ATRX-209ENST00000623242 POTEB2H3BUK9 544 aa9.14□□□□□ -0.95
ATRX-209ENST00000623242 IER5LQ5T953 404 aa9.14□□□□□ -0.95
ATRX-209ENST00000623242 SOX12O15370 315 aa9.13□□□□□ -0.95
ATRX-209ENST00000623242 CADPS2Q86UW7 1296 aa9.13□□□□□ -0.95
ATRX-209ENST00000623242 MS4A4AQ96JQ5 239 aa9.12□□□□□ -0.95
ATRX-209ENST00000623242 TRIM35Q9UPQ4 493 aa9.12□□□□□ -0.95
ATRX-209ENST00000623242 NLRP6P59044 892 aa9.11□□□□□ -0.95
ATRX-209ENST00000623242 SEC24BO95487 1268 aa9.1□□□□□ -0.95
ATRX-209ENST00000623242 OTUD5Q96G74 571 aa9.1□□□□□ -0.95
ATRX-209ENST00000623242 POTEFA5A3E0 1075 aa9.08□□□□□ -0.96
ATRX-209ENST00000623242 MAMSTRQ6ZN01 415 aa9.08□□□□□ -0.96
ATRX-209ENST00000623242 BCANQ96GW7 911 aa9.06□□□□□ -0.96
ATRX-209ENST00000623242 POTEJP0CG39 1038 aa9.05□□□□□ -0.96
ATRX-209ENST00000623242 ILDR1Q86SU0 546 aaPredicted RBP9.05□□□□□ -0.96
ATRX-209ENST00000623242 GOLGA2Q08379 1002 aa9.04□□□□□ -0.96
ATRX-209ENST00000623242 MKRN3Q13064 507 aaKnown RBP9.04□□□□□ -0.96
ATRX-209ENST00000623242 COLQQ9Y215 455 aaPredicted RBP9.02□□□□□ -0.97
ATRX-209ENST00000623242 PLCG2P16885 1265 aa9.01□□□□□ -0.97
ATRX-209ENST00000623242 IRX5P78411 483 aaPredicted RBP9□□□□□ -0.97
ATRX-209ENST00000623242 SCUBE2Q9NQ36 999 aa9□□□□□ -0.97
ATRX-209ENST00000623242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.99□□□□□ -0.975e-7■■■■□ 24.4
ATRX-209ENST00000623242 DPY19L2Q6NUT2 758 aa8.98□□□□□ -0.97
ATRX-209ENST00000623242 PDCD7Q8N8D1 485 aaKnown RBP8.96□□□□□ -0.98
ATRX-209ENST00000623242 NCKAP5LQ9HCH0 1330 aa8.96□□□□□ -0.98
ATRX-209ENST00000623242 OCEL1Q9H607 264 aa8.95□□□□□ -0.98
ATRX-209ENST00000623242 KCNV2Q8TDN2 545 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms