RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 FAM212AQ96EL1 285 aa14.73□□□□□ -0.05
RAB28P4-201ENST00000622233 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
RAB28P4-201ENST00000622233 RNF25Q96BH1 459 aaPredicted RBP14.69□□□□□ -0.06
RAB28P4-201ENST00000622233 TRIM41Q8WV44 630 aa14.66□□□□□ -0.06
RAB28P4-201ENST00000622233 TSPYL2Q9H2G4 693 aaPredicted RBP14.64□□□□□ -0.07
RAB28P4-201ENST00000622233 PYGBP11216 843 aa14.61□□□□□ -0.07
RAB28P4-201ENST00000622233 CHGAP10645 457 aaKnown RBP14.56□□□□□ -0.08
RAB28P4-201ENST00000622233 PLCB2Q00722 1185 aa14.55□□□□□ -0.08
RAB28P4-201ENST00000622233 RIOK3O14730 519 aaKnown RBP14.52□□□□□ -0.09
RAB28P4-201ENST00000622233 CHRM1P11229 460 aaPredicted RBP14.52□□□□□ -0.09
RAB28P4-201ENST00000622233 POTEHQ6S545 545 aa14.51□□□□□ -0.09
RAB28P4-201ENST00000622233 BBXQ8WY36 941 aaPredicted RBP14.48□□□□□ -0.09
RAB28P4-201ENST00000622233 CCDC61Q9Y6R9 512 aa14.47□□□□□ -0.09
RAB28P4-201ENST00000622233 HS6ST3Q8IZP7 471 aa14.43□□□□□ -0.1
RAB28P4-201ENST00000622233 PAXIP1Q6ZW49 1069 aaPredicted RBP14.41□□□□□ -0.1
RAB28P4-201ENST00000622233 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.41□□□□□ -0.1
RAB28P4-201ENST00000622233 VGFO15240 615 aaPredicted RBP14.4□□□□□ -0.1
RAB28P4-201ENST00000622233 CFAP44Q96MT7 982 aa14.39□□□□□ -0.11
RAB28P4-201ENST00000622233 PCDHB8Q9UN66 801 aa14.39□□□□□ -0.11
RAB28P4-201ENST00000622233 PCDHB13Q9Y5F0 798 aa14.39□□□□□ -0.11
RAB28P4-201ENST00000622233 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
RAB28P4-201ENST00000622233 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
RAB28P4-201ENST00000622233 CD44P16070 742 aaKnown RBP14.38□□□□□ -0.11
RAB28P4-201ENST00000622233 HAP1P54257 671 aaPredicted RBP14.38□□□□□ -0.11
RAB28P4-201ENST00000622233 ZFP91Q96JP5 570 aaPredicted RBP14.38□□□□□ -0.11
RAB28P4-201ENST00000622233 STK25O00506 426 aa14.37□□□□□ -0.11
RAB28P4-201ENST00000622233 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
RAB28P4-201ENST00000622233 NKX1-1Q15270 411 aaPredicted RBP14.33□□□□□ -0.12
RAB28P4-201ENST00000622233 MAP3K13O43283 966 aa14.32□□□□□ -0.12
RAB28P4-201ENST00000622233 PHF12Q96QT6 1004 aa14.32□□□□□ -0.12
RAB28P4-201ENST00000622233 BCL11BQ9C0K0 894 aaPredicted RBP14.32□□□□□ -0.12
RAB28P4-201ENST00000622233 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
RAB28P4-201ENST00000622233 KIF12Q96FN5 646 aa14.31□□□□□ -0.12
RAB28P4-201ENST00000622233 STK24Q9Y6E0 443 aa14.31□□□□□ -0.12
RAB28P4-201ENST00000622233 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
RAB28P4-201ENST00000622233 SGIP1Q9BQI5 828 aa14.3□□□□□ -0.12
RAB28P4-201ENST00000622233 IFNL1Q8IU54 200 aa14.28□□□□□ -0.12
RAB28P4-201ENST00000622233 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
RAB28P4-201ENST00000622233 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
RAB28P4-201ENST00000622233 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
RAB28P4-201ENST00000622233 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
RAB28P4-201ENST00000622233 PDAP1Q13442 181 aaKnown RBP14.23□□□□□ -0.13
RAB28P4-201ENST00000622233 ABCC9O60706 1549 aa14.23□□□□□ -0.13
RAB28P4-201ENST00000622233 PSEN1P49768 467 aa14.22□□□□□ -0.13
RAB28P4-201ENST00000622233 TSHZ2Q9NRE2 1034 aa14.19□□□□□ -0.14
RAB28P4-201ENST00000622233 GTPBP6O43824 516 aaPredicted RBP14.17□□□□□ -0.14
RAB28P4-201ENST00000622233 EVX2Q03828 476 aa14.17□□□□□ -0.14
RAB28P4-201ENST00000622233 TRPC6Q9Y210 931 aa14.16□□□□□ -0.14
RAB28P4-201ENST00000622233 HAX1O00165 279 aa14.14□□□□□ -0.15
RAB28P4-201ENST00000622233 MS4A3Q96HJ5 214 aa14.13□□□□□ -0.15
RAB28P4-201ENST00000622233 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
RAB28P4-201ENST00000622233 CABP2Q9NPB3 220 aa14.07□□□□□ -0.16
RAB28P4-201ENST00000622233 VSIG10Q8N0Z9 540 aa14.06□□□□□ -0.16
RAB28P4-201ENST00000622233 EFCAB3Q8N7B9 438 aa14.04□□□□□ -0.16
RAB28P4-201ENST00000622233 GALR2O43603 387 aaPredicted RBP14.02□□□□□ -0.17
RAB28P4-201ENST00000622233 MFRPQ9BY79 579 aa14.02□□□□□ -0.17
RAB28P4-201ENST00000622233 TMEM106CQ9BVX2 250 aa14.01□□□□□ -0.17
RAB28P4-201ENST00000622233 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.17
RAB28P4-201ENST00000622233 PPP1R37O75864 691 aa13.92□□□□□ -0.18
RAB28P4-201ENST00000622233 FBXO22Q8NEZ5 403 aa13.92□□□□□ -0.18
RAB28P4-201ENST00000622233 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
RAB28P4-201ENST00000622233 RYDENQ9NUL5 291 aaKnown RBP13.92□□□□□ -0.18
RAB28P4-201ENST00000622233 TTLL13PA6NNM8 815 aa13.91□□□□□ -0.18
RAB28P4-201ENST00000622233 TIE1P35590 1138 aa13.9□□□□□ -0.18
RAB28P4-201ENST00000622233 SOX12O15370 315 aa13.88□□□□□ -0.19
RAB28P4-201ENST00000622233 NLRP6P59044 892 aa13.87□□□□□ -0.19
RAB28P4-201ENST00000622233 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
RAB28P4-201ENST00000622233 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
RAB28P4-201ENST00000622233 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
RAB28P4-201ENST00000622233 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
RAB28P4-201ENST00000622233 GABBR2O75899 941 aa13.81□□□□□ -0.2
RAB28P4-201ENST00000622233 MKRN3Q13064 507 aaKnown RBP13.81□□□□□ -0.2
RAB28P4-201ENST00000622233 ATN1P54259 1190 aaPredicted RBP13.8□□□□□ -0.2
RAB28P4-201ENST00000622233 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
RAB28P4-201ENST00000622233 CLCN6P51797 869 aa13.75□□□□□ -0.21
RAB28P4-201ENST00000622233 NACADO15069 1562 aa13.75□□□□□ -0.21
RAB28P4-201ENST00000622233 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
RAB28P4-201ENST00000622233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.74□□□□□ -0.21
RAB28P4-201ENST00000622233 ZCCHC6Q5VYS8 1495 aaKnown RBP13.73□□□□□ -0.21
RAB28P4-201ENST00000622233 ASTLQ6HA08 431 aaPredicted RBP13.72□□□□□ -0.21
RAB28P4-201ENST00000622233 MYO15BQ96JP2 1530 aa13.7□□□□□ -0.22
RAB28P4-201ENST00000622233 DPY19L2Q6NUT2 758 aa13.7□□□□□ -0.22
RAB28P4-201ENST00000622233 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
RAB28P4-201ENST00000622233 BCANQ96GW7 911 aa13.69□□□□□ -0.22
RAB28P4-201ENST00000622233 PELP1Q8IZL8 1130 aaKnown RBP13.68□□□□□ -0.22
RAB28P4-201ENST00000622233 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
RAB28P4-201ENST00000622233 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
RAB28P4-201ENST00000622233 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
RAB28P4-201ENST00000622233 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
RAB28P4-201ENST00000622233 NCKAP5LQ9HCH0 1330 aa13.61□□□□□ -0.23
RAB28P4-201ENST00000622233 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
RAB28P4-201ENST00000622233 SP7Q8TDD2 431 aaPredicted RBP13.58□□□□□ -0.24
RAB28P4-201ENST00000622233 WDR70Q9NW82 654 aa13.57□□□□□ -0.24
RAB28P4-201ENST00000622233 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
RAB28P4-201ENST00000622233 IER5LQ5T953 404 aa13.55□□□□□ -0.24
RAB28P4-201ENST00000622233 KCNV2Q8TDN2 545 aa13.55□□□□□ -0.24
RAB28P4-201ENST00000622233 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
RAB28P4-201ENST00000622233 UNC13AQ9UPW8 1703 aa13.55□□□□□ -0.24
RAB28P4-201ENST00000622233 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
RAB28P4-201ENST00000622233 MICALL2Q8IY33 904 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms