RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 WDR43Q15061 677 aaKnown RBP eCLIP16.2■□□□□ 0.18
SLC6A6-210ENST00000622186 GLIPR1L2Q4G1C9 344 aa16.16■□□□□ 0.18
SLC6A6-210ENST00000622186 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
SLC6A6-210ENST00000622186 KLHL34Q8N239 644 aa16.11■□□□□ 0.17
SLC6A6-210ENST00000622186 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
SLC6A6-210ENST00000622186 FAM9BQ8IZU0 186 aa16.1■□□□□ 0.17
SLC6A6-210ENST00000622186 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
SLC6A6-210ENST00000622186 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
SLC6A6-210ENST00000622186 KDM2AQ9Y2K7 1162 aa16.06■□□□□ 0.16
SLC6A6-210ENST00000622186 TMX4Q9H1E5 349 aaPredicted RBP16.05■□□□□ 0.16
SLC6A6-210ENST00000622186 FKBP8Q14318 412 aa16.05■□□□□ 0.16
SLC6A6-210ENST00000622186 TMC1Q8TDI8 760 aa16.04■□□□□ 0.16
SLC6A6-210ENST00000622186 TRIM44Q96DX7 344 aaPredicted RBP16.04■□□□□ 0.16
SLC6A6-210ENST00000622186 GTF3C3Q9Y5Q9 886 aa16.03■□□□□ 0.16
SLC6A6-210ENST00000622186 PDE4CQ08493 712 aa16.02■□□□□ 0.16
SLC6A6-210ENST00000622186 KCNH8Q96L42 1107 aa16.02■□□□□ 0.16
SLC6A6-210ENST00000622186 NAP1L2Q9ULW6 460 aaPredicted RBP16.02■□□□□ 0.16
SLC6A6-210ENST00000622186 TONSLQ96HA7 1378 aa16■□□□□ 0.15
SLC6A6-210ENST00000622186 G3V3G9 751 aa15.99■□□□□ 0.15
SLC6A6-210ENST00000622186 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
SLC6A6-210ENST00000622186 NBR1Q14596 966 aa15.99■□□□□ 0.15
SLC6A6-210ENST00000622186 ABCC9O60706 1549 aa15.99■□□□□ 0.15
SLC6A6-210ENST00000622186 HNRNPUQ00839 825 aaKnown RBP eCLIP15.98■□□□□ 0.15
SLC6A6-210ENST00000622186 PTMAP06454 111 aaKnown RBP15.98■□□□□ 0.15
SLC6A6-210ENST00000622186 MLECQ14165 292 aa15.98■□□□□ 0.15
SLC6A6-210ENST00000622186 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
SLC6A6-210ENST00000622186 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
SLC6A6-210ENST00000622186 CASC1Q6TDU7 716 aa15.97■□□□□ 0.15
SLC6A6-210ENST00000622186 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
SLC6A6-210ENST00000622186 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
SLC6A6-210ENST00000622186 CCDC136Q96JN2 1154 aa15.96■□□□□ 0.15
SLC6A6-210ENST00000622186 ZNF330Q9Y3S2 320 aaPredicted RBP15.96■□□□□ 0.15
SLC6A6-210ENST00000622186 MSH5O43196 834 aa15.96■□□□□ 0.15
SLC6A6-210ENST00000622186 FGD1P98174 961 aa15.96■□□□□ 0.14
SLC6A6-210ENST00000622186 GOLGA6L22H0YM25 854 aa15.95■□□□□ 0.14
SLC6A6-210ENST00000622186 OS9Q13438 667 aaPredicted RBP15.94■□□□□ 0.14
SLC6A6-210ENST00000622186 SOX12O15370 315 aa15.94■□□□□ 0.14
SLC6A6-210ENST00000622186 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
SLC6A6-210ENST00000622186 DNTTIP2Q5QJE6 756 aaKnown RBP15.91■□□□□ 0.14
SLC6A6-210ENST00000622186 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.141e-7■■■■■ 35.2
SLC6A6-210ENST00000622186 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
SLC6A6-210ENST00000622186 GOLGA6L6A8MZA4 724 aa15.88■□□□□ 0.13
SLC6A6-210ENST00000622186 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
SLC6A6-210ENST00000622186 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
SLC6A6-210ENST00000622186 PLCB2Q00722 1185 aa15.86■□□□□ 0.13
SLC6A6-210ENST00000622186 TNNT2P45379 298 aaPredicted RBP15.86■□□□□ 0.13
SLC6A6-210ENST00000622186 KCNJ4P48050 445 aa15.85■□□□□ 0.13
SLC6A6-210ENST00000622186 BECN1Q14457 450 aa15.85■□□□□ 0.13
SLC6A6-210ENST00000622186 WWC1Q8IX03 1113 aa15.83■□□□□ 0.13
SLC6A6-210ENST00000622186 POGKQ9P215 609 aa15.8■□□□□ 0.12
SLC6A6-210ENST00000622186 CWC22Q9HCG8 908 aaKnown RBP15.8■□□□□ 0.12
SLC6A6-210ENST00000622186 FTSJ3Q8IY81 847 aaKnown RBP15.8■□□□□ 0.12
SLC6A6-210ENST00000622186 PNNQ9H307 717 aaKnown RBP15.78■□□□□ 0.12
SLC6A6-210ENST00000622186 MRS2Q9HD23 443 aa15.78■□□□□ 0.12
SLC6A6-210ENST00000622186 MAPK8IP3Q9UPT6 1336 aa15.78■□□□□ 0.12
SLC6A6-210ENST00000622186 DDX10Q13206 875 aaKnown RBP15.78■□□□□ 0.12
SLC6A6-210ENST00000622186 CSB-PGBD3P0DP91 1061 aa15.77■□□□□ 0.12
SLC6A6-210ENST00000622186 NRDCO43847 1150 aa15.77■□□□□ 0.12
SLC6A6-210ENST00000622186 ANP32EQ9BTT0 268 aa15.77■□□□□ 0.11
SLC6A6-210ENST00000622186 KIAA2012Q0VF49 1180 aa15.75■□□□□ 0.11
SLC6A6-210ENST00000622186 VPS53Q5VIR6 699 aa15.74■□□□□ 0.11
SLC6A6-210ENST00000622186 GNL2Q13823 731 aaKnown RBP15.73■□□□□ 0.11
SLC6A6-210ENST00000622186 NOC3LQ8WTT2 800 aaKnown RBP15.73■□□□□ 0.11
SLC6A6-210ENST00000622186 PAK3O75914 559 aaPredicted RBP15.73■□□□□ 0.11
SLC6A6-210ENST00000622186 NEUROD2Q15784 382 aa15.72■□□□□ 0.11
SLC6A6-210ENST00000622186 RGL3Q3MIN7 710 aa15.72■□□□□ 0.11
SLC6A6-210ENST00000622186 L1TD1Q5T7N2 865 aaKnown RBP15.72■□□□□ 0.11
SLC6A6-210ENST00000622186 GOLGA6L4A6NEF3 574 aa15.71■□□□□ 0.11
SLC6A6-210ENST00000622186 CHAF1AQ13111 956 aaPredicted RBP15.7■□□□□ 0.1
SLC6A6-210ENST00000622186 NUDCQ9Y266 331 aa15.69■□□□□ 0.1
SLC6A6-210ENST00000622186 DDRGK1Q96HY6 314 aa15.68■□□□□ 0.1
SLC6A6-210ENST00000622186 PPP1R1BQ9UD71 204 aaPredicted RBP15.67■□□□□ 0.1
SLC6A6-210ENST00000622186 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
SLC6A6-210ENST00000622186 KNSTRNQ9Y448 316 aa15.65■□□□□ 0.1
SLC6A6-210ENST00000622186 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
SLC6A6-210ENST00000622186 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
SLC6A6-210ENST00000622186 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
SLC6A6-210ENST00000622186 CDCA8Q53HL2 280 aa15.63■□□□□ 0.09
SLC6A6-210ENST00000622186 U2SURPO15042 1029 aaKnown RBP15.62■□□□□ 0.09
SLC6A6-210ENST00000622186 RAD21O60216 631 aa15.61■□□□□ 0.09
SLC6A6-210ENST00000622186 PLEKHD1A6NEE1 506 aa15.61■□□□□ 0.09
SLC6A6-210ENST00000622186 HDGFP51858 240 aaKnown RBP15.61■□□□□ 0.09
SLC6A6-210ENST00000622186 FBXW7Q969H0 707 aa15.6■□□□□ 0.09
SLC6A6-210ENST00000622186 DRC7Q8IY82 874 aa15.59■□□□□ 0.09
SLC6A6-210ENST00000622186 WDR70Q9NW82 654 aa15.59■□□□□ 0.09
SLC6A6-210ENST00000622186 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
SLC6A6-210ENST00000622186 A0A0U1RQG5 324 aaPredicted RBP15.58■□□□□ 0.09
SLC6A6-210ENST00000622186 CHMP4BQ9H444 224 aaKnown RBP15.58■□□□□ 0.09
SLC6A6-210ENST00000622186 FRAT1Q92837 279 aaPredicted RBP15.58■□□□□ 0.08
SLC6A6-210ENST00000622186 MTUS2Q5JR59 1369 aa15.58■□□□□ 0.08
SLC6A6-210ENST00000622186 GTF2E1P29083 439 aaPredicted RBP15.58■□□□□ 0.08
SLC6A6-210ENST00000622186 CTDP1Q9Y5B0 961 aaPredicted RBP15.58■□□□□ 0.08
SLC6A6-210ENST00000622186 CHMP3Q9Y3E7 222 aa15.56■□□□□ 0.08
SLC6A6-210ENST00000622186 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
SLC6A6-210ENST00000622186 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
SLC6A6-210ENST00000622186 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
SLC6A6-210ENST00000622186 FRAT2O75474 233 aaPredicted RBP15.55■□□□□ 0.08
SLC6A6-210ENST00000622186 RTF1Q92541 710 aaKnown RBP15.54■□□□□ 0.08
SLC6A6-210ENST00000622186 CEP89Q96ST8 783 aa15.54■□□□□ 0.08
SLC6A6-210ENST00000622186 VSIG10Q8N0Z9 540 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms