RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
COL25A1-209ENST00000622134 CFDP1Q9UEE9 299 aaPredicted RBP14.16□□□□□ -0.14
COL25A1-209ENST00000622134 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
COL25A1-209ENST00000622134 HDGFP51858 240 aaKnown RBP14.14□□□□□ -0.15
COL25A1-209ENST00000622134 MIER1Q8N108 512 aa14.14□□□□□ -0.15
COL25A1-209ENST00000622134 CADPSQ9ULU8 1353 aa14.14□□□□□ -0.15
COL25A1-209ENST00000622134 CUX2O14529 1486 aa14.11□□□□□ -0.15
COL25A1-209ENST00000622134 NBR1Q14596 966 aa14.11□□□□□ -0.15
COL25A1-209ENST00000622134 CARMIL1Q5VZK9 1371 aa14.1□□□□□ -0.15
COL25A1-209ENST00000622134 CHIC2Q9UKJ5 165 aa14.1□□□□□ -0.15
COL25A1-209ENST00000622134 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
COL25A1-209ENST00000622134 FHAD1B1AJZ9 1412 aa14.09□□□□□ -0.15
COL25A1-209ENST00000622134 SOGA1O94964 1423 aa14.08□□□□□ -0.15
COL25A1-209ENST00000622134 NPM2Q86SE8 214 aaKnown RBP14.04□□□□□ -0.16
COL25A1-209ENST00000622134 KANK1Q14678 1352 aa14.04□□□□□ -0.16
COL25A1-209ENST00000622134 CANXP27824 592 aaKnown RBP14.03□□□□□ -0.16
COL25A1-209ENST00000622134 HAP1P54257 671 aaPredicted RBP14.03□□□□□ -0.16
COL25A1-209ENST00000622134 SUPT16HQ9Y5B9 1047 aaKnown RBP14.03□□□□□ -0.16
COL25A1-209ENST00000622134 EIF4G1Q04637 1599 aaKnown RBP14.02□□□□□ -0.17
COL25A1-209ENST00000622134 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.17
COL25A1-209ENST00000622134 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
COL25A1-209ENST00000622134 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
COL25A1-209ENST00000622134 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
COL25A1-209ENST00000622134 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
COL25A1-209ENST00000622134 EFCAB2Q5VUJ9 269 aa13.97□□□□□ -0.17
COL25A1-209ENST00000622134 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
COL25A1-209ENST00000622134 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
COL25A1-209ENST00000622134 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
COL25A1-209ENST00000622134 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
COL25A1-209ENST00000622134 DEKP35659 375 aaKnown RBP13.93□□□□□ -0.18
COL25A1-209ENST00000622134 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL25A1-209ENST00000622134 ANP32BQ92688 251 aaKnown RBP13.92□□□□□ -0.18
COL25A1-209ENST00000622134 ERICH6BQ5W0A0 696 aa13.91□□□□□ -0.18
COL25A1-209ENST00000622134 RRP7BPQ9NSQ0 103 aa13.91□□□□□ -0.18
COL25A1-209ENST00000622134 KDM2AQ9Y2K7 1162 aa13.9□□□□□ -0.18
COL25A1-209ENST00000622134 CEP162Q5TB80 1403 aa13.9□□□□□ -0.18
COL25A1-209ENST00000622134 FMN1Q68DA7 1419 aa13.89□□□□□ -0.19
COL25A1-209ENST00000622134 CCDC136Q96JN2 1154 aa13.88□□□□□ -0.19
COL25A1-209ENST00000622134 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
COL25A1-209ENST00000622134 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-209ENST00000622134 RSPH4AQ5TD94 716 aa13.87□□□□□ -0.19
COL25A1-209ENST00000622134 RBM19Q9Y4C8 960 aaKnown RBP13.87□□□□□ -0.19
COL25A1-209ENST00000622134 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
COL25A1-209ENST00000622134 NOP58Q9Y2X3 529 aaKnown RBP13.86□□□□□ -0.19
COL25A1-209ENST00000622134 A0A0G2JS52 829 aa13.86□□□□□ -0.19
COL25A1-209ENST00000622134 POGKQ9P215 609 aa13.85□□□□□ -0.19
COL25A1-209ENST00000622134 DDX10Q13206 875 aaKnown RBP13.85□□□□□ -0.19
COL25A1-209ENST00000622134 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
COL25A1-209ENST00000622134 MLECQ14165 292 aa13.85□□□□□ -0.19
COL25A1-209ENST00000622134 JPH4Q96JJ6 628 aa13.85□□□□□ -0.19
COL25A1-209ENST00000622134 DDRGK1Q96HY6 314 aa13.84□□□□□ -0.19
COL25A1-209ENST00000622134 WDR43Q15061 677 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL25A1-209ENST00000622134 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
COL25A1-209ENST00000622134 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
COL25A1-209ENST00000622134 ZBTB7CA1YPR0 619 aa13.79□□□□□ -0.2
COL25A1-209ENST00000622134 EIF4G2P78344 907 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL25A1-209ENST00000622134 AEBP2Q6ZN18 517 aaPredicted RBP13.79□□□□□ -0.2
COL25A1-209ENST00000622134 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
COL25A1-209ENST00000622134 RGL3Q3MIN7 710 aa13.78□□□□□ -0.2
COL25A1-209ENST00000622134 TMC1Q8TDI8 760 aa13.78□□□□□ -0.2
COL25A1-209ENST00000622134 CYB5RLQ6IPT4 315 aa13.78□□□□□ -0.2
COL25A1-209ENST00000622134 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.2
COL25A1-209ENST00000622134 GGT6Q6P531 493 aa13.76□□□□□ -0.21
COL25A1-209ENST00000622134 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.76□□□□□ -0.21
COL25A1-209ENST00000622134 EID1Q9Y6B2 187 aa13.76□□□□□ -0.21
COL25A1-209ENST00000622134 PTPRGP23470 1445 aa13.76□□□□□ -0.21
COL25A1-209ENST00000622134 PPP4R2Q9NY27 417 aa13.75□□□□□ -0.21
COL25A1-209ENST00000622134 UPF2Q9HAU5 1272 aaKnown RBP13.75□□□□□ -0.21
COL25A1-209ENST00000622134 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-209ENST00000622134 LMOD2Q6P5Q4 547 aa13.74□□□□□ -0.21
COL25A1-209ENST00000622134 IRX6P78412 446 aaPredicted RBP13.71□□□□□ -0.21
COL25A1-209ENST00000622134 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.22
COL25A1-209ENST00000622134 CCDC18Q5T9S5 1454 aa13.71□□□□□ -0.22
COL25A1-209ENST00000622134 ANKRD30AQ9BXX3 1397 aa13.7□□□□□ -0.22
COL25A1-209ENST00000622134 NUDCQ9Y266 331 aa13.7□□□□□ -0.22
COL25A1-209ENST00000622134 ARHGAP35Q9NRY4 1499 aa13.69□□□□□ -0.22
COL25A1-209ENST00000622134 KNSTRNQ9Y448 316 aa13.69□□□□□ -0.22
COL25A1-209ENST00000622134 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
COL25A1-209ENST00000622134 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
COL25A1-209ENST00000622134 WIZO95785 1651 aa13.67□□□□□ -0.22
COL25A1-209ENST00000622134 TRIM44Q96DX7 344 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-209ENST00000622134 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-209ENST00000622134 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-209ENST00000622134 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
COL25A1-209ENST00000622134 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
COL25A1-209ENST00000622134 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
COL25A1-209ENST00000622134 MYH16Q9H6N6 1097 aa13.64□□□□□ -0.23
COL25A1-209ENST00000622134 BECN1Q14457 450 aa13.63□□□□□ -0.23
COL25A1-209ENST00000622134 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
COL25A1-209ENST00000622134 KIF3BO15066 747 aa13.63□□□□□ -0.23
COL25A1-209ENST00000622134 VPS8Q8N3P4 1428 aa13.62□□□□□ -0.23
COL25A1-209ENST00000622134 WASHC2CQ9Y4E1 1318 aa13.62□□□□□ -0.23
COL25A1-209ENST00000622134 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
COL25A1-209ENST00000622134 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
COL25A1-209ENST00000622134 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
COL25A1-209ENST00000622134 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
COL25A1-209ENST00000622134 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
COL25A1-209ENST00000622134 FAM69CQ0P6D2 419 aa13.6□□□□□ -0.23
COL25A1-209ENST00000622134 TMF1P82094 1093 aa13.59□□□□□ -0.23
COL25A1-209ENST00000622134 MAPK8IP3Q9UPT6 1336 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms