RNA–Protein interactions for RNA: ENST00000622048.4

PCDH15-234, Transcript of protocadherin related 15, humanhuman

TSL 5 BASIC

Gene PCDH15, Length 6,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-234ENST00000622048 NEFLP07196 543 aa5.74□□□□□ -1.49
PCDH15-234ENST00000622048 ISY1Q9ULR0 285 aaKnown RBP5.73□□□□□ -1.49
PCDH15-234ENST00000622048 SAFB2Q14151 953 aaKnown RBP eCLIP5.73□□□□□ -1.49
PCDH15-234ENST00000622048 LOC105371045A0A1W2PR82 267 aa5.73□□□□□ -1.49
PCDH15-234ENST00000622048 ZBTB47Q9UFB7 747 aaPredicted RBP5.73□□□□□ -1.49
PCDH15-234ENST00000622048 NEFMP07197 916 aa5.73□□□□□ -1.49
PCDH15-234ENST00000622048 NUTM2DQ5VT03 806 aaPredicted RBP5.73□□□□□ -1.49
PCDH15-234ENST00000622048 CANXP27824 592 aaKnown RBP5.72□□□□□ -1.49
PCDH15-234ENST00000622048 SCRIBQ14160 1630 aa5.72□□□□□ -1.49
PCDH15-234ENST00000622048 CLSTN1O94985 981 aa5.69□□□□□ -1.5
PCDH15-234ENST00000622048 TPRNQ4KMQ1 711 aa5.69□□□□□ -1.5
PCDH15-234ENST00000622048 GRM1Q13255 1194 aa5.68□□□□□ -1.5
PCDH15-234ENST00000622048 NBR1Q14596 966 aa5.68□□□□□ -1.5
PCDH15-234ENST00000622048 KRI1Q8N9T8 703 aaKnown RBP5.67□□□□□ -1.5
PCDH15-234ENST00000622048 CSB-PGBD3P0DP91 1061 aa5.67□□□□□ -1.5
PCDH15-234ENST00000622048 PAXIP1Q6ZW49 1069 aaPredicted RBP5.67□□□□□ -1.5
PCDH15-234ENST00000622048 TMC1Q8TDI8 760 aa5.67□□□□□ -1.5
PCDH15-234ENST00000622048 WWC3Q9ULE0 1092 aa5.67□□□□□ -1.5
PCDH15-234ENST00000622048 RGL3Q3MIN7 710 aa5.66□□□□□ -1.5
PCDH15-234ENST00000622048 STK26Q9P289 416 aa5.65□□□□□ -1.5
PCDH15-234ENST00000622048 TNNT2P45379 298 aaPredicted RBP5.65□□□□□ -1.51
PCDH15-234ENST00000622048 ZNF316A6NFI3 1004 aaPredicted RBP5.65□□□□□ -1.51
PCDH15-234ENST00000622048 SF3B2Q13435 895 aaKnown RBP5.65□□□□□ -1.51
PCDH15-234ENST00000622048 GGT6Q6P531 493 aa5.65□□□□□ -1.51
PCDH15-234ENST00000622048 G3V3G9 751 aa5.64□□□□□ -1.51
PCDH15-234ENST00000622048 DCAF8Q5TAQ9 597 aa5.64□□□□□ -1.51
PCDH15-234ENST00000622048 SYTL4Q96C24 671 aaPredicted RBP5.64□□□□□ -1.51
PCDH15-234ENST00000622048 WDR70Q9NW82 654 aa5.64□□□□□ -1.51
PCDH15-234ENST00000622048 LAS1LQ9Y4W2 734 aaKnown RBP5.63□□□□□ -1.51
PCDH15-234ENST00000622048 FBXW7Q969H0 707 aa5.62□□□□□ -1.51
PCDH15-234ENST00000622048 ECM2O94769 699 aaPredicted RBP5.62□□□□□ -1.51
PCDH15-234ENST00000622048 USP35Q9P2H5 1018 aa5.61□□□□□ -1.51
PCDH15-234ENST00000622048 EVA1CP58658 441 aa5.61□□□□□ -1.51
PCDH15-234ENST00000622048 SAMD1Q6SPF0 538 aaPredicted RBP5.6□□□□□ -1.51
PCDH15-234ENST00000622048 CDK11BP21127 795 aaKnown RBP5.59□□□□□ -1.51
PCDH15-234ENST00000622048 LTV1Q96GA3 475 aaPredicted RBP5.58□□□□□ -1.52
PCDH15-234ENST00000622048 GOLGA2Q08379 1002 aa5.58□□□□□ -1.52
PCDH15-234ENST00000622048 POGKQ9P215 609 aa5.58□□□□□ -1.52
PCDH15-234ENST00000622048 EIF4G1Q04637 1599 aaKnown RBP5.58□□□□□ -1.52
PCDH15-234ENST00000622048 PRM3Q9NNZ6 103 aa5.58□□□□□ -1.52
PCDH15-234ENST00000622048 TMX4Q9H1E5 349 aaPredicted RBP5.58□□□□□ -1.52
PCDH15-234ENST00000622048 NEUROD2Q15784 382 aa5.57□□□□□ -1.52
PCDH15-234ENST00000622048 CAPN15O75808 1086 aa5.57□□□□□ -1.52
PCDH15-234ENST00000622048 FAM69CQ0P6D2 419 aa5.57□□□□□ -1.52
PCDH15-234ENST00000622048 CDK11AQ9UQ88 783 aaPredicted RBP5.56□□□□□ -1.52
PCDH15-234ENST00000622048 IBSPP21815 317 aaPredicted RBP5.56□□□□□ -1.52
PCDH15-234ENST00000622048 RAD21O60216 631 aa5.55□□□□□ -1.52
PCDH15-234ENST00000622048 CWC22Q9HCG8 908 aaKnown RBP5.55□□□□□ -1.52
PCDH15-234ENST00000622048 FBXO3Q9UK99 471 aa5.55□□□□□ -1.52
PCDH15-234ENST00000622048 ZNF428Q96B54 188 aa5.54□□□□□ -1.52
PCDH15-234ENST00000622048 RRP7BPQ9NSQ0 103 aa5.54□□□□□ -1.52
PCDH15-234ENST00000622048 CALRP27797 417 aaKnown RBP5.54□□□□□ -1.52
PCDH15-234ENST00000622048 MYCNP04198 464 aaPredicted RBP5.54□□□□□ -1.52
PCDH15-234ENST00000622048 HIRIP3Q9BW71 556 aaPredicted RBP5.54□□□□□ -1.52
PCDH15-234ENST00000622048 PDE4CQ08493 712 aa5.52□□□□□ -1.53
PCDH15-234ENST00000622048 NGEFQ8N5V2 710 aa5.51□□□□□ -1.53
PCDH15-234ENST00000622048 TSPY4P0CV99 314 aa5.51□□□□□ -1.53
PCDH15-234ENST00000622048 TSPY10P0CW01 314 aa5.51□□□□□ -1.53
PCDH15-234ENST00000622048 NAP1L2Q9ULW6 460 aaPredicted RBP5.51□□□□□ -1.53
PCDH15-234ENST00000622048 WWC1Q8IX03 1113 aa5.51□□□□□ -1.53
PCDH15-234ENST00000622048 RBM33Q96EV2 1170 aaKnown RBP5.51□□□□□ -1.53
PCDH15-234ENST00000622048 NUTM2GQ5VZR2 741 aa5.51□□□□□ -1.53
PCDH15-234ENST00000622048 GTF2E1P29083 439 aaPredicted RBP5.5□□□□□ -1.53
PCDH15-234ENST00000622048 OSCARQ8IYS5 282 aa5.5□□□□□ -1.53
PCDH15-234ENST00000622048 PLEKHD1A6NEE1 506 aa5.5□□□□□ -1.53
PCDH15-234ENST00000622048 ADAMTS2O95450 1211 aa5.5□□□□□ -1.53
PCDH15-234ENST00000622048 FAM177BA6PVY3 158 aa5.49□□□□□ -1.53
PCDH15-234ENST00000622048 STRN4Q9NRL3 753 aa5.49□□□□□ -1.53
PCDH15-234ENST00000622048 PLCD3Q8N3E9 789 aa5.49□□□□□ -1.53
PCDH15-234ENST00000622048 CNKSR2Q8WXI2 1034 aa5.49□□□□□ -1.53
PCDH15-234ENST00000622048 ZNF526Q8TF50 670 aaPredicted RBP5.49□□□□□ -1.53
PCDH15-234ENST00000622048 ZNF219Q9P2Y4 722 aaPredicted RBP5.49□□□□□ -1.53
PCDH15-234ENST00000622048 CHMP3Q9Y3E7 222 aa5.49□□□□□ -1.53
PCDH15-234ENST00000622048 TCERG1O14776 1098 aaKnown RBP5.48□□□□□ -1.53
PCDH15-234ENST00000622048 CECR2Q9BXF3 1484 aa5.48□□□□□ -1.53
PCDH15-234ENST00000622048 SRPK2P78362 688 aaKnown RBP5.48□□□□□ -1.53
PCDH15-234ENST00000622048 SMARCA2P51531 1590 aa5.48□□□□□ -1.53
PCDH15-234ENST00000622048 SLC4A3P48751 1232 aa5.47□□□□□ -1.53
PCDH15-234ENST00000622048 CSRNP3Q8WYN3 585 aa5.47□□□□□ -1.53
PCDH15-234ENST00000622048 TRIM44Q96DX7 344 aaPredicted RBP5.47□□□□□ -1.53
PCDH15-234ENST00000622048 C16orf71Q8IYS4 520 aaPredicted RBP5.46□□□□□ -1.53
PCDH15-234ENST00000622048 A0A0U1RQG5 324 aaPredicted RBP5.46□□□□□ -1.54
PCDH15-234ENST00000622048 FKBP8Q14318 412 aa5.46□□□□□ -1.54
PCDH15-234ENST00000622048 FOXD1Q16676 465 aa5.46□□□□□ -1.54
PCDH15-234ENST00000622048 EID1Q9Y6B2 187 aa5.46□□□□□ -1.54
PCDH15-234ENST00000622048 VPS53Q5VIR6 699 aa5.45□□□□□ -1.54
PCDH15-234ENST00000622048 NCLP19338 710 aaKnown RBP5.45□□□□□ -1.54
PCDH15-234ENST00000622048 XPCQ01831 940 aaPredicted RBP5.45□□□□□ -1.54
PCDH15-234ENST00000622048 U2SURPO15042 1029 aaKnown RBP5.44□□□□□ -1.54
PCDH15-234ENST00000622048 FRAT2O75474 233 aaPredicted RBP5.44□□□□□ -1.54
PCDH15-234ENST00000622048 CHMP4BP1P59074 171 aa5.44□□□□□ -1.54
PCDH15-234ENST00000622048 DIEXFQ68CQ4 756 aaKnown RBP5.44□□□□□ -1.54
PCDH15-234ENST00000622048 ZEB1P37275 1124 aaPredicted RBP5.44□□□□□ -1.54
PCDH15-234ENST00000622048 NGDNQ8NEJ9 315 aaKnown RBP5.44□□□□□ -1.54
PCDH15-234ENST00000622048 OS9Q13438 667 aaPredicted RBP5.44□□□□□ -1.54
PCDH15-234ENST00000622048 ATF3P18847 181 aa5.43□□□□□ -1.54
PCDH15-234ENST00000622048 UBAP1LF5GYI3 381 aa5.43□□□□□ -1.54
PCDH15-234ENST00000622048 FAM9BQ8IZU0 186 aa5.42□□□□□ -1.54
PCDH15-234ENST00000622048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.42□□□□□ -1.54
PCDH15-234ENST00000622048 SPRYD3Q8NCJ5 442 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms