RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 MSNP26038 577 aaKnown RBP15.3■□□□□ 0.04
CLTC-215ENST00000621829 HIRIP3Q9BW71 556 aaPredicted RBP15.28■□□□□ 0.04
CLTC-215ENST00000621829 SENP3-EIF4A1A0A087X0R7 540 aa15.28■□□□□ 0.04
CLTC-215ENST00000621829 TNNT3P45378 269 aaPredicted RBP15.26■□□□□ 0.03
CLTC-215ENST00000621829 CHAF1AQ13111 956 aaPredicted RBP15.24■□□□□ 0.03
CLTC-215ENST00000621829 ZRSR1Q15695 479 aaKnown RBP15.24■□□□□ 0.03
CLTC-215ENST00000621829 WDR43Q15061 677 aaKnown RBP eCLIP15.23■□□□□ 0.031e-5■■□□□ 14.2
CLTC-215ENST00000621829 MYH16Q9H6N6 1097 aa15.22■□□□□ 0.03
CLTC-215ENST00000621829 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
CLTC-215ENST00000621829 L1TD1Q5T7N2 865 aaKnown RBP15.21■□□□□ 0.03
CLTC-215ENST00000621829 VSIG10Q8N0Z9 540 aa15.2■□□□□ 0.02
CLTC-215ENST00000621829 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
CLTC-215ENST00000621829 B4GALNT3Q6L9W6 998 aa15.16■□□□□ 0.02
CLTC-215ENST00000621829 SPRYD3Q8NCJ5 442 aa15.15■□□□□ 0.02
CLTC-215ENST00000621829 HSP90AA2PQ14568 343 aaPredicted RBP15.15■□□□□ 0.02
CLTC-215ENST00000621829 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
CLTC-215ENST00000621829 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
CLTC-215ENST00000621829 RGS3P49796 1198 aa15.14■□□□□ 0.01
CLTC-215ENST00000621829 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
CLTC-215ENST00000621829 TULP1O00294 542 aaPredicted RBP15.13■□□□□ 0.01
CLTC-215ENST00000621829 GOLGA6L6A8MZA4 724 aa15.12■□□□□ 0.01
CLTC-215ENST00000621829 ARID3CA6NKF2 412 aa15.11■□□□□ 0.01
CLTC-215ENST00000621829 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
CLTC-215ENST00000621829 GZF1Q9H116 711 aaPredicted RBP15.09■□□□□ 0.01
CLTC-215ENST00000621829 DRC7Q8IY82 874 aa15.09■□□□□ 0.01
CLTC-215ENST00000621829 TAOK2Q9UL54 1235 aa15.08■□□□□ 0
CLTC-215ENST00000621829 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
CLTC-215ENST00000621829 CASC1Q6TDU7 716 aa15.06■□□□□ 0
CLTC-215ENST00000621829 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
CLTC-215ENST00000621829 ZNF777Q9ULD5 760 aaPredicted RBP15.04■□□□□ -0
CLTC-215ENST00000621829 NRDCO43847 1150 aa15.01□□□□□ -0.01
CLTC-215ENST00000621829 RSPH6AQ9H0K4 717 aa15.01□□□□□ -0.01
CLTC-215ENST00000621829 HSCBQ8IWL3 235 aa14.99□□□□□ -0.01
CLTC-215ENST00000621829 FTSJ3Q8IY81 847 aaKnown RBP14.98□□□□□ -0.01
CLTC-215ENST00000621829 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
CLTC-215ENST00000621829 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
CLTC-215ENST00000621829 CHGAP10645 457 aaKnown RBP14.97□□□□□ -0.01
CLTC-215ENST00000621829 CCDC180Q9P1Z9 1646 aa14.96□□□□□ -0.01
CLTC-215ENST00000621829 KIAA2012Q0VF49 1180 aa14.96□□□□□ -0.02
CLTC-215ENST00000621829 GOLGA6L3A6NEY3 463 aa14.91□□□□□ -0.02
CLTC-215ENST00000621829 GOLGA6L4A6NEF3 574 aa14.91□□□□□ -0.02
CLTC-215ENST00000621829 SLKQ9H2G2 1235 aaPredicted RBP14.91□□□□□ -0.02
CLTC-215ENST00000621829 PKNOX2Q96KN3 472 aa14.9□□□□□ -0.02
CLTC-215ENST00000621829 EIF4G2P78344 907 aaKnown RBP eCLIP14.9□□□□□ -0.02
CLTC-215ENST00000621829 CALRP27797 417 aaKnown RBP14.9□□□□□ -0.02
CLTC-215ENST00000621829 PODXL2Q9NZ53 605 aa14.89□□□□□ -0.03
CLTC-215ENST00000621829 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
CLTC-215ENST00000621829 CHIC2Q9UKJ5 165 aa14.89□□□□□ -0.03
CLTC-215ENST00000621829 NAP1L2Q9ULW6 460 aaPredicted RBP14.88□□□□□ -0.03
CLTC-215ENST00000621829 PTMSP20962 102 aa14.87□□□□□ -0.03
CLTC-215ENST00000621829 ZNF771Q7L3S4 317 aaPredicted RBP14.87□□□□□ -0.03
CLTC-215ENST00000621829 PRKCSHP14314 528 aaPredicted RBP14.87□□□□□ -0.03
CLTC-215ENST00000621829 GOLGA6L1Q8N7Z2 621 aa14.86□□□□□ -0.03
CLTC-215ENST00000621829 NOC3LQ8WTT2 800 aaKnown RBP14.85□□□□□ -0.03
CLTC-215ENST00000621829 SETQ01105 290 aaPredicted RBP14.83□□□□□ -0.03
CLTC-215ENST00000621829 IPO9Q96P70 1041 aaKnown RBP14.83□□□□□ -0.03
CLTC-215ENST00000621829 GBP4Q96PP9 640 aa14.83□□□□□ -0.04
CLTC-215ENST00000621829 FGD1P98174 961 aa14.83□□□□□ -0.04
CLTC-215ENST00000621829 NEUROD2Q15784 382 aa14.83□□□□□ -0.04
CLTC-215ENST00000621829 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
CLTC-215ENST00000621829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.044e-7■■□□□ 13.9
CLTC-215ENST00000621829 FBLN2P98095 1184 aa14.81□□□□□ -0.04
CLTC-215ENST00000621829 ANO8Q9HCE9 1232 aaPredicted RBP14.8□□□□□ -0.04
CLTC-215ENST00000621829 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
CLTC-215ENST00000621829 APPP05067 770 aa14.79□□□□□ -0.04
CLTC-215ENST00000621829 KCNJ4P48050 445 aa14.79□□□□□ -0.04
CLTC-215ENST00000621829 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
CLTC-215ENST00000621829 FAM13BQ9NYF5 915 aa14.75□□□□□ -0.05
CLTC-215ENST00000621829 A0A0G2JS52 829 aa14.74□□□□□ -0.05
CLTC-215ENST00000621829 PATL2C9JE40 543 aaKnown RBP14.74□□□□□ -0.05
CLTC-215ENST00000621829 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
CLTC-215ENST00000621829 GSE1Q14687 1217 aa14.73□□□□□ -0.05
CLTC-215ENST00000621829 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
CLTC-215ENST00000621829 SYAP1Q96A49 352 aaPredicted RBP14.7□□□□□ -0.06
CLTC-215ENST00000621829 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
CLTC-215ENST00000621829 MCCP23508 829 aa14.69□□□□□ -0.06
CLTC-215ENST00000621829 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
CLTC-215ENST00000621829 OS9Q13438 667 aaPredicted RBP14.69□□□□□ -0.06
CLTC-215ENST00000621829 CLSTN1O94985 981 aa14.69□□□□□ -0.06
CLTC-215ENST00000621829 KNSTRNQ9Y448 316 aa14.68□□□□□ -0.06
CLTC-215ENST00000621829 CALD1Q05682 793 aaKnown RBP14.68□□□□□ -0.06
CLTC-215ENST00000621829 CC2D1BQ5T0F9 858 aaKnown RBP14.67□□□□□ -0.06
CLTC-215ENST00000621829 PDE4CQ08493 712 aa14.67□□□□□ -0.06
CLTC-215ENST00000621829 TCERG1O14776 1098 aaKnown RBP14.66□□□□□ -0.06
CLTC-215ENST00000621829 CFAP53Q96M91 514 aa14.65□□□□□ -0.06
CLTC-215ENST00000621829 USP35Q9P2H5 1018 aa14.65□□□□□ -0.06
CLTC-215ENST00000621829 SLC4A3P48751 1232 aa14.64□□□□□ -0.07
CLTC-215ENST00000621829 GNL2Q13823 731 aaKnown RBP14.64□□□□□ -0.07
CLTC-215ENST00000621829 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
CLTC-215ENST00000621829 RRP7BPQ9NSQ0 103 aa14.63□□□□□ -0.07
CLTC-215ENST00000621829 TAF7LQ5H9L4 462 aa14.62□□□□□ -0.07
CLTC-215ENST00000621829 CCAR2Q8N163 923 aaKnown RBP14.62□□□□□ -0.07
CLTC-215ENST00000621829 TPM4P67936 248 aa14.61□□□□□ -0.07
CLTC-215ENST00000621829 FOXD4L5Q5VV16 416 aaPredicted RBP14.61□□□□□ -0.07
CLTC-215ENST00000621829 FOXD4L4Q8WXT5 416 aaPredicted RBP14.61□□□□□ -0.07
CLTC-215ENST00000621829 APBB1O00213 710 aa14.61□□□□□ -0.07
CLTC-215ENST00000621829 MAPK8IP3Q9UPT6 1336 aa14.6□□□□□ -0.07
CLTC-215ENST00000621829 ZNF592Q92610 1267 aa14.6□□□□□ -0.07
CLTC-215ENST00000621829 C14orf37Q86TY3 774 aa14.6□□□□□ -0.07
CLTC-215ENST00000621829 ESF1Q9H501 851 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms