RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
LPCAT3-213ENST00000620843 RNF25Q96BH1 459 aaPredicted RBP15.42■□□□□ 0.06
LPCAT3-213ENST00000620843 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
LPCAT3-213ENST00000620843 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
LPCAT3-213ENST00000620843 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
LPCAT3-213ENST00000620843 FARP1Q9Y4F1 1045 aaPredicted RBP15.32■□□□□ 0.04
LPCAT3-213ENST00000620843 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
LPCAT3-213ENST00000620843 CHRM1P11229 460 aaPredicted RBP15.3■□□□□ 0.04
LPCAT3-213ENST00000620843 HS6ST3Q8IZP7 471 aa15.3■□□□□ 0.04
LPCAT3-213ENST00000620843 PYGBP11216 843 aa15.28■□□□□ 0.04
LPCAT3-213ENST00000620843 FXR2P51116 673 aaKnown RBP eCLIP15.27■□□□□ 0.04
LPCAT3-213ENST00000620843 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.04
LPCAT3-213ENST00000620843 SPRYD3Q8NCJ5 442 aa15.25■□□□□ 0.03
LPCAT3-213ENST00000620843 TSPYL2Q9H2G4 693 aaPredicted RBP15.24■□□□□ 0.03
LPCAT3-213ENST00000620843 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
LPCAT3-213ENST00000620843 VGFO15240 615 aaPredicted RBP15.22■□□□□ 0.03
LPCAT3-213ENST00000620843 STK25O00506 426 aa15.17■□□□□ 0.02
LPCAT3-213ENST00000620843 VSIG10Q8N0Z9 540 aa15.17■□□□□ 0.02
LPCAT3-213ENST00000620843 PIP4P2Q8N4L2 257 aa15.16■□□□□ 0.02
LPCAT3-213ENST00000620843 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
LPCAT3-213ENST00000620843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.12■□□□□ 0.01
LPCAT3-213ENST00000620843 ZFP91Q96JP5 570 aaPredicted RBP15.12■□□□□ 0.01
LPCAT3-213ENST00000620843 SGIP1Q9BQI5 828 aa15.11■□□□□ 0.01
LPCAT3-213ENST00000620843 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
LPCAT3-213ENST00000620843 TSHZ2Q9NRE2 1034 aa15.09■□□□□ 0.01
LPCAT3-213ENST00000620843 BCL11BQ9C0K0 894 aaPredicted RBP15.08■□□□□ 0
LPCAT3-213ENST00000620843 STK24Q9Y6E0 443 aa15.08■□□□□ 0
LPCAT3-213ENST00000620843 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
LPCAT3-213ENST00000620843 KDM2AQ9Y2K7 1162 aa15.06■□□□□ 0
LPCAT3-213ENST00000620843 ZNF467Q7Z7K2 595 aaPredicted RBP15.05■□□□□ -0
LPCAT3-213ENST00000620843 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
LPCAT3-213ENST00000620843 PCDHB8Q9UN66 801 aa15□□□□□ -0.01
LPCAT3-213ENST00000620843 PCDHB13Q9Y5F0 798 aa15□□□□□ -0.01
LPCAT3-213ENST00000620843 GTPBP6O43824 516 aaPredicted RBP14.99□□□□□ -0.01
LPCAT3-213ENST00000620843 PDAP1Q13442 181 aaKnown RBP14.96□□□□□ -0.01
LPCAT3-213ENST00000620843 ZNF579Q8NAF0 562 aaKnown RBP14.94□□□□□ -0.02
LPCAT3-213ENST00000620843 MAP3K13O43283 966 aa14.9□□□□□ -0.02
LPCAT3-213ENST00000620843 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
LPCAT3-213ENST00000620843 KIF12Q96FN5 646 aa14.9□□□□□ -0.02
LPCAT3-213ENST00000620843 ZRANB1Q9UGI0 708 aa14.9□□□□□ -0.02
LPCAT3-213ENST00000620843 PSEN1P49768 467 aa14.89□□□□□ -0.03
LPCAT3-213ENST00000620843 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
LPCAT3-213ENST00000620843 BCANQ96GW7 911 aa14.87□□□□□ -0.03
LPCAT3-213ENST00000620843 RYDENQ9NUL5 291 aaKnown RBP14.87□□□□□ -0.03
LPCAT3-213ENST00000620843 PHF12Q96QT6 1004 aa14.82□□□□□ -0.04
LPCAT3-213ENST00000620843 C19orf67A6NJJ6 358 aa14.73□□□□□ -0.05
LPCAT3-213ENST00000620843 MFRPQ9BY79 579 aa14.72□□□□□ -0.05
LPCAT3-213ENST00000620843 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
LPCAT3-213ENST00000620843 EFCAB3Q8N7B9 438 aa14.7□□□□□ -0.06
LPCAT3-213ENST00000620843 MS4A3Q96HJ5 214 aa14.66□□□□□ -0.06
LPCAT3-213ENST00000620843 SOX12O15370 315 aa14.62□□□□□ -0.07
LPCAT3-213ENST00000620843 NLRP6P59044 892 aa14.62□□□□□ -0.07
LPCAT3-213ENST00000620843 PHF8Q9UPP1 1060 aa14.62□□□□□ -0.07
LPCAT3-213ENST00000620843 FBXO22Q8NEZ5 403 aa14.61□□□□□ -0.07
LPCAT3-213ENST00000620843 TMEM106CQ9BVX2 250 aa14.61□□□□□ -0.07
LPCAT3-213ENST00000620843 TRPC6Q9Y210 931 aa14.61□□□□□ -0.07
LPCAT3-213ENST00000620843 CADPS2Q86UW7 1296 aa14.59□□□□□ -0.07
LPCAT3-213ENST00000620843 PPP1R37O75864 691 aa14.57□□□□□ -0.08
LPCAT3-213ENST00000620843 NBR1Q14596 966 aa14.56□□□□□ -0.08
LPCAT3-213ENST00000620843 GOLGA2Q08379 1002 aa14.55□□□□□ -0.08
LPCAT3-213ENST00000620843 HAX1O00165 279 aa14.53□□□□□ -0.08
LPCAT3-213ENST00000620843 TIE1P35590 1138 aa14.49□□□□□ -0.09
LPCAT3-213ENST00000620843 PRKCSHP14314 528 aaPredicted RBP14.48□□□□□ -0.09
LPCAT3-213ENST00000620843 MS4A4AQ96JQ5 239 aa14.48□□□□□ -0.09
LPCAT3-213ENST00000620843 TTLL13PA6NNM8 815 aa14.47□□□□□ -0.09
LPCAT3-213ENST00000620843 MKRN3Q13064 507 aaKnown RBP14.47□□□□□ -0.09
LPCAT3-213ENST00000620843 WDR70Q9NW82 654 aa14.47□□□□□ -0.09
LPCAT3-213ENST00000620843 GALR2O43603 387 aaPredicted RBP14.46□□□□□ -0.09
LPCAT3-213ENST00000620843 EVX2Q03828 476 aa14.46□□□□□ -0.09
LPCAT3-213ENST00000620843 BMP2KQ9NSY1 1161 aaPredicted RBP14.45□□□□□ -0.1
LPCAT3-213ENST00000620843 TPRNQ4KMQ1 711 aa14.41□□□□□ -0.1
LPCAT3-213ENST00000620843 P3H3Q8IVL6 736 aa14.41□□□□□ -0.1
LPCAT3-213ENST00000620843 TRIM35Q9UPQ4 493 aa14.38□□□□□ -0.11
LPCAT3-213ENST00000620843 CLCN6P51797 869 aa14.37□□□□□ -0.11
LPCAT3-213ENST00000620843 KCNV2Q8TDN2 545 aa14.36□□□□□ -0.11
LPCAT3-213ENST00000620843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.35□□□□□ -0.11
LPCAT3-213ENST00000620843 ILDR1Q86SU0 546 aaPredicted RBP14.31□□□□□ -0.12
LPCAT3-213ENST00000620843 NCKAP5LQ9HCH0 1330 aa14.31□□□□□ -0.12
LPCAT3-213ENST00000620843 ATN1P54259 1190 aaPredicted RBP14.28□□□□□ -0.12
LPCAT3-213ENST00000620843 PDE4AP27815 886 aa14.27□□□□□ -0.13
LPCAT3-213ENST00000620843 LARP6Q9BRS8 491 aaKnown RBP14.27□□□□□ -0.13
LPCAT3-213ENST00000620843 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
LPCAT3-213ENST00000620843 E2F4Q16254 413 aa14.25□□□□□ -0.13
LPCAT3-213ENST00000620843 CRISPLD2Q9H0B8 497 aa14.25□□□□□ -0.13
LPCAT3-213ENST00000620843 ASTLQ6HA08 431 aaPredicted RBP14.23□□□□□ -0.13
LPCAT3-213ENST00000620843 DPY19L2Q6NUT2 758 aa14.23□□□□□ -0.13
LPCAT3-213ENST00000620843 MFSD10Q14728 455 aa14.21□□□□□ -0.13
LPCAT3-213ENST00000620843 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
LPCAT3-213ENST00000620843 GABBR2O75899 941 aa14.19□□□□□ -0.14
LPCAT3-213ENST00000620843 PDCD7Q8N8D1 485 aaKnown RBP14.19□□□□□ -0.14
LPCAT3-213ENST00000620843 ARHGEF1Q92888 912 aaKnown RBP14.19□□□□□ -0.14
LPCAT3-213ENST00000620843 IRX5P78411 483 aaPredicted RBP14.17□□□□□ -0.14
LPCAT3-213ENST00000620843 IER5LQ5T953 404 aa14.16□□□□□ -0.14
LPCAT3-213ENST00000620843 POTEHQ6S545 545 aa14.15□□□□□ -0.14
LPCAT3-213ENST00000620843 MICALL2Q8IY33 904 aa14.15□□□□□ -0.14
LPCAT3-213ENST00000620843 OCEL1Q9H607 264 aa14.15□□□□□ -0.14
LPCAT3-213ENST00000620843 GPHNQ9NQX3 736 aaPredicted RBP14.11□□□□□ -0.15
LPCAT3-213ENST00000620843 PLCG2P16885 1265 aa14.1□□□□□ -0.15
LPCAT3-213ENST00000620843 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
LPCAT3-213ENST00000620843 CAMK2BQ13554 666 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms