RNA–Protein interactions for RNA: ENST00000620323.1

USP12-203, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 3 BASIC

Gene USP12, Length 349 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-203ENST00000620323 POTEMA6NI47 508 aa12.29□□□□□ -0.44
USP12-203ENST00000620323 POTEJP0CG39 1038 aa12.29□□□□□ -0.44
USP12-203ENST00000620323 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
USP12-203ENST00000620323 POTEGQ6S5H5 508 aa12.25□□□□□ -0.45
USP12-203ENST00000620323 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
USP12-203ENST00000620323 PROM2Q8N271 834 aa12.22□□□□□ -0.45
USP12-203ENST00000620323 C7P10643 843 aa12.21□□□□□ -0.45
USP12-203ENST00000620323 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.45
USP12-203ENST00000620323 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
USP12-203ENST00000620323 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
USP12-203ENST00000620323 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
USP12-203ENST00000620323 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
USP12-203ENST00000620323 LCE2DQ5TA82 110 aaPredicted RBP12.12□□□□□ -0.47
USP12-203ENST00000620323 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
USP12-203ENST00000620323 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
USP12-203ENST00000620323 MAP3K13O43283 966 aa12.08□□□□□ -0.48
USP12-203ENST00000620323 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
USP12-203ENST00000620323 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
USP12-203ENST00000620323 SCUBE2Q9NQ36 999 aa12.05□□□□□ -0.48
USP12-203ENST00000620323 MIER1Q8N108 512 aa12.04□□□□□ -0.48
USP12-203ENST00000620323 TIE1P35590 1138 aa12.01□□□□□ -0.49
USP12-203ENST00000620323 COLQQ9Y215 455 aaPredicted RBP12□□□□□ -0.49
USP12-203ENST00000620323 TTLL13PA6NNM8 815 aa11.98□□□□□ -0.49
USP12-203ENST00000620323 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
USP12-203ENST00000620323 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
USP12-203ENST00000620323 SEC24BO95487 1268 aa11.92□□□□□ -0.5
USP12-203ENST00000620323 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
USP12-203ENST00000620323 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
USP12-203ENST00000620323 PCDHB13Q9Y5F0 798 aa11.9□□□□□ -0.5
USP12-203ENST00000620323 NUBP1P53384 320 aa11.87□□□□□ -0.51
USP12-203ENST00000620323 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
USP12-203ENST00000620323 IER5LQ5T953 404 aa11.83□□□□□ -0.52
USP12-203ENST00000620323 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
USP12-203ENST00000620323 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
USP12-203ENST00000620323 TMEM106CQ9BVX2 250 aa11.78□□□□□ -0.52
USP12-203ENST00000620323 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
USP12-203ENST00000620323 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
USP12-203ENST00000620323 ST18O60284 1047 aa11.74□□□□□ -0.53
USP12-203ENST00000620323 FAM212AQ96EL1 285 aa11.74□□□□□ -0.53
USP12-203ENST00000620323 PLCG2P16885 1265 aa11.72□□□□□ -0.53
USP12-203ENST00000620323 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.53
USP12-203ENST00000620323 PYGBP11216 843 aa11.65□□□□□ -0.54
USP12-203ENST00000620323 FKBP8Q14318 412 aa11.65□□□□□ -0.54
USP12-203ENST00000620323 PCDHB8Q9UN66 801 aa11.63□□□□□ -0.55
USP12-203ENST00000620323 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
USP12-203ENST00000620323 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
USP12-203ENST00000620323 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
USP12-203ENST00000620323 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
USP12-203ENST00000620323 MMRN1Q13201 1228 aa11.51□□□□□ -0.57
USP12-203ENST00000620323 SPNS2Q8IVW8 549 aa11.5□□□□□ -0.57
USP12-203ENST00000620323 PDCD7Q8N8D1 485 aaKnown RBP11.5□□□□□ -0.57
USP12-203ENST00000620323 TMEM121BQ9BXQ6 578 aaPredicted RBP11.5□□□□□ -0.57
USP12-203ENST00000620323 SNPHO15079 494 aa11.47□□□□□ -0.57
USP12-203ENST00000620323 C3orf67Q6ZVT6 689 aa11.42□□□□□ -0.58
USP12-203ENST00000620323 FBXO3Q9UK99 471 aa11.41□□□□□ -0.58
USP12-203ENST00000620323 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
USP12-203ENST00000620323 ZNF467Q7Z7K2 595 aaPredicted RBP11.4□□□□□ -0.58
USP12-203ENST00000620323 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
USP12-203ENST00000620323 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
USP12-203ENST00000620323 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
USP12-203ENST00000620323 EMP3P54852 163 aa11.38□□□□□ -0.59
USP12-203ENST00000620323 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
USP12-203ENST00000620323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.59
USP12-203ENST00000620323 PSEN1P49768 467 aa11.37□□□□□ -0.59
USP12-203ENST00000620323 GSE1Q14687 1217 aa11.37□□□□□ -0.59
USP12-203ENST00000620323 L3MBTL3Q96JM7 780 aaPredicted RBP11.37□□□□□ -0.59
USP12-203ENST00000620323 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
USP12-203ENST00000620323 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
USP12-203ENST00000620323 HS3ST6Q96QI5 342 aa11.33□□□□□ -0.6
USP12-203ENST00000620323 KRTAP3-3Q9BYR6 98 aa11.33□□□□□ -0.6
USP12-203ENST00000620323 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
USP12-203ENST00000620323 FAM205CA6NFA0 338 aa11.32□□□□□ -0.6
USP12-203ENST00000620323 CHRM1P11229 460 aaPredicted RBP11.32□□□□□ -0.6
USP12-203ENST00000620323 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
USP12-203ENST00000620323 PDAP1Q13442 181 aaKnown RBP11.26□□□□□ -0.61
USP12-203ENST00000620323 CABP2Q9NPB3 220 aa11.25□□□□□ -0.61
USP12-203ENST00000620323 HOXB3P14651 431 aaPredicted RBP11.23□□□□□ -0.61
USP12-203ENST00000620323 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
USP12-203ENST00000620323 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
USP12-203ENST00000620323 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
USP12-203ENST00000620323 G3V3G9 751 aa11.15□□□□□ -0.62
USP12-203ENST00000620323 SPOCK2Q92563 424 aa11.14□□□□□ -0.63
USP12-203ENST00000620323 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
USP12-203ENST00000620323 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
USP12-203ENST00000620323 ERBB3P21860 1342 aa11.09□□□□□ -0.63
USP12-203ENST00000620323 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
USP12-203ENST00000620323 DOK7Q18PE1 504 aa11.07□□□□□ -0.64
USP12-203ENST00000620323 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
USP12-203ENST00000620323 TMEM92Q6UXU6 159 aa11.04□□□□□ -0.64
USP12-203ENST00000620323 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
USP12-203ENST00000620323 RNF166Q96A37 237 aaPredicted RBP11.01□□□□□ -0.65
USP12-203ENST00000620323 RIMBP2O15034 1052 aa10.98□□□□□ -0.65
USP12-203ENST00000620323 MS4A4AQ96JQ5 239 aa10.95□□□□□ -0.66
USP12-203ENST00000620323 GPR153Q6NV75 609 aa10.94□□□□□ -0.66
USP12-203ENST00000620323 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
USP12-203ENST00000620323 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
USP12-203ENST00000620323 RNF25Q96BH1 459 aaPredicted RBP10.91□□□□□ -0.66
USP12-203ENST00000620323 PHF8Q9UPP1 1060 aa10.91□□□□□ -0.66
USP12-203ENST00000620323 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
USP12-203ENST00000620323 ZSWIM6Q9HCJ5 1215 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms