RNA–Protein interactions for RNA: ENST00000619352.4

HMGN2-210, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-210ENST00000619352 METRNQ9UJH8 293 aa14.26□□□□□ -0.13
HMGN2-210ENST00000619352 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
HMGN2-210ENST00000619352 ATMINO43313 823 aaPredicted RBP14.23□□□□□ -0.13
HMGN2-210ENST00000619352 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
HMGN2-210ENST00000619352 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
HMGN2-210ENST00000619352 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
HMGN2-210ENST00000619352 MS4A3Q96HJ5 214 aa14.2□□□□□ -0.14
HMGN2-210ENST00000619352 LCE2DQ5TA82 110 aaPredicted RBP14.15□□□□□ -0.14
HMGN2-210ENST00000619352 SCUBE2Q9NQ36 999 aa14.08□□□□□ -0.16
HMGN2-210ENST00000619352 ATN1P54259 1190 aaPredicted RBP14.04□□□□□ -0.16
HMGN2-210ENST00000619352 FAM163AQ96GL9 167 aaPredicted RBP14.02□□□□□ -0.17
HMGN2-210ENST00000619352 CCDC61Q9Y6R9 512 aa14.02□□□□□ -0.17
HMGN2-210ENST00000619352 POTEFA5A3E0 1075 aa13.98□□□□□ -0.17
HMGN2-210ENST00000619352 KIF12Q96FN5 646 aa13.97□□□□□ -0.17
HMGN2-210ENST00000619352 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
HMGN2-210ENST00000619352 BMP2KQ9NSY1 1161 aaPredicted RBP13.93□□□□□ -0.18
HMGN2-210ENST00000619352 TIE1P35590 1138 aa13.91□□□□□ -0.18
HMGN2-210ENST00000619352 PROM2Q8N271 834 aa13.88□□□□□ -0.19
HMGN2-210ENST00000619352 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
HMGN2-210ENST00000619352 MAP3K13O43283 966 aa13.81□□□□□ -0.2
HMGN2-210ENST00000619352 CDAN1Q8IWY9 1227 aa13.81□□□□□ -0.2
HMGN2-210ENST00000619352 COLQQ9Y215 455 aaPredicted RBP13.79□□□□□ -0.2
HMGN2-210ENST00000619352 IER5LQ5T953 404 aa13.77□□□□□ -0.21
HMGN2-210ENST00000619352 TTLL13PA6NNM8 815 aa13.76□□□□□ -0.21
HMGN2-210ENST00000619352 SEC24BO95487 1268 aa13.75□□□□□ -0.21
HMGN2-210ENST00000619352 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
HMGN2-210ENST00000619352 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
HMGN2-210ENST00000619352 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
HMGN2-210ENST00000619352 TRIM35Q9UPQ4 493 aa13.66□□□□□ -0.22
HMGN2-210ENST00000619352 ST18O60284 1047 aa13.65□□□□□ -0.22
HMGN2-210ENST00000619352 SLAIN1Q8ND83 568 aa13.62□□□□□ -0.23
HMGN2-210ENST00000619352 MIER1Q8N108 512 aa13.6□□□□□ -0.23
HMGN2-210ENST00000619352 PCDHB13Q9Y5F0 798 aa13.58□□□□□ -0.24
HMGN2-210ENST00000619352 TMEM121BQ9BXQ6 578 aaPredicted RBP13.54□□□□□ -0.24
HMGN2-210ENST00000619352 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
HMGN2-210ENST00000619352 SPNS2Q8IVW8 549 aa13.51□□□□□ -0.25
HMGN2-210ENST00000619352 PLCG2P16885 1265 aa13.49□□□□□ -0.25
HMGN2-210ENST00000619352 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
HMGN2-210ENST00000619352 IFNL1Q8IU54 200 aa13.49□□□□□ -0.25
HMGN2-210ENST00000619352 NUBP1P53384 320 aa13.47□□□□□ -0.25
HMGN2-210ENST00000619352 TMEM106CQ9BVX2 250 aa13.46□□□□□ -0.25
HMGN2-210ENST00000619352 SNPHO15079 494 aa13.45□□□□□ -0.26
HMGN2-210ENST00000619352 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
HMGN2-210ENST00000619352 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
HMGN2-210ENST00000619352 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
HMGN2-210ENST00000619352 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
HMGN2-210ENST00000619352 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.35□□□□□ -0.27
HMGN2-210ENST00000619352 MARVELD3Q96A59 401 aa13.29□□□□□ -0.28
HMGN2-210ENST00000619352 EMP3P54852 163 aa13.18□□□□□ -0.3
HMGN2-210ENST00000619352 KRTAP3-3Q9BYR6 98 aa13.18□□□□□ -0.3
HMGN2-210ENST00000619352 KRTAP3-2Q9BYR7 98 aa13.18□□□□□ -0.3
HMGN2-210ENST00000619352 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
HMGN2-210ENST00000619352 L3MBTL3Q96JM7 780 aaPredicted RBP13.15□□□□□ -0.3
HMGN2-210ENST00000619352 PYGBP11216 843 aa13.13□□□□□ -0.31
HMGN2-210ENST00000619352 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
HMGN2-210ENST00000619352 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
HMGN2-210ENST00000619352 POTEB3A0JP26 581 aa13.12□□□□□ -0.31
HMGN2-210ENST00000619352 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
HMGN2-210ENST00000619352 POTEBQ6S5H4 581 aa13.12□□□□□ -0.31
HMGN2-210ENST00000619352 PCDHB8Q9UN66 801 aa13.12□□□□□ -0.31
HMGN2-210ENST00000619352 FAM205CA6NFA0 338 aa13.06□□□□□ -0.32
HMGN2-210ENST00000619352 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
HMGN2-210ENST00000619352 MKRN3Q13064 507 aaKnown RBP13.04□□□□□ -0.32
HMGN2-210ENST00000619352 ZNF467Q7Z7K2 595 aaPredicted RBP13.03□□□□□ -0.32
HMGN2-210ENST00000619352 ILDR1Q86SU0 546 aaPredicted RBP13.02□□□□□ -0.33
HMGN2-210ENST00000619352 GOLGA2Q08379 1002 aa13□□□□□ -0.33
HMGN2-210ENST00000619352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
HMGN2-210ENST00000619352 FKBP8Q14318 412 aa12.97□□□□□ -0.33
HMGN2-210ENST00000619352 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
HMGN2-210ENST00000619352 GSE1Q14687 1217 aa12.93□□□□□ -0.34
HMGN2-210ENST00000619352 HOXB3P14651 431 aaPredicted RBP12.92□□□□□ -0.34
HMGN2-210ENST00000619352 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
HMGN2-210ENST00000619352 PSEN1P49768 467 aa12.89□□□□□ -0.35
HMGN2-210ENST00000619352 RNF166Q96A37 237 aaPredicted RBP12.84□□□□□ -0.35
HMGN2-210ENST00000619352 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
HMGN2-210ENST00000619352 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.36
HMGN2-210ENST00000619352 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.36
HMGN2-210ENST00000619352 PDAP1Q13442 181 aaKnown RBP12.8□□□□□ -0.36
HMGN2-210ENST00000619352 DOK7Q18PE1 504 aa12.8□□□□□ -0.36
HMGN2-210ENST00000619352 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
HMGN2-210ENST00000619352 ERBB3P21860 1342 aa12.8□□□□□ -0.36
HMGN2-210ENST00000619352 G3V3G9 751 aa12.78□□□□□ -0.36
HMGN2-210ENST00000619352 MYT1LQ9UL68 1186 aa12.75□□□□□ -0.37
HMGN2-210ENST00000619352 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
HMGN2-210ENST00000619352 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
HMGN2-210ENST00000619352 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
HMGN2-210ENST00000619352 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
HMGN2-210ENST00000619352 PTGER2P43116 358 aa12.7□□□□□ -0.38
HMGN2-210ENST00000619352 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
HMGN2-210ENST00000619352 ZNF687Q8N1G0 1237 aa12.7□□□□□ -0.38
HMGN2-210ENST00000619352 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
HMGN2-210ENST00000619352 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
HMGN2-210ENST00000619352 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
HMGN2-210ENST00000619352 GPR153Q6NV75 609 aa12.6□□□□□ -0.39
HMGN2-210ENST00000619352 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
HMGN2-210ENST00000619352 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
HMGN2-210ENST00000619352 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
HMGN2-210ENST00000619352 CIZ1Q9ULV3 898 aaPredicted RBP12.48□□□□□ -0.41
HMGN2-210ENST00000619352 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
HMGN2-210ENST00000619352 ANKRD13DQ6ZTN6 518 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms