RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 OTUD5Q96G74 571 aa18.15■□□□□ 0.5
CBWD1-228ENST00000619157 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
CBWD1-228ENST00000619157 ATMINO43313 823 aaPredicted RBP18.12■□□□□ 0.49
CBWD1-228ENST00000619157 ASTLQ6HA08 431 aaPredicted RBP18.12■□□□□ 0.49
CBWD1-228ENST00000619157 RASEFQ8IZ41 740 aa18.09■□□□□ 0.49
CBWD1-228ENST00000619157 METRNQ9UJH8 293 aa18.09■□□□□ 0.49
CBWD1-228ENST00000619157 KIF12Q96FN5 646 aa18.06■□□□□ 0.48
CBWD1-228ENST00000619157 PLCD3Q8N3E9 789 aa18.04■□□□□ 0.48
CBWD1-228ENST00000619157 ATN1P54259 1190 aaPredicted RBP18.01■□□□□ 0.47
CBWD1-228ENST00000619157 SLC39A7Q92504 469 aa18.01■□□□□ 0.47
CBWD1-228ENST00000619157 TRPC6Q9Y210 931 aa18.01■□□□□ 0.47
CBWD1-228ENST00000619157 MAP3K13O43283 966 aa17.99■□□□□ 0.47
CBWD1-228ENST00000619157 FKBP8Q14318 412 aa17.99■□□□□ 0.47
CBWD1-228ENST00000619157 C7P10643 843 aa17.97■□□□□ 0.47
CBWD1-228ENST00000619157 POTEJP0CG39 1038 aa17.94■□□□□ 0.46
CBWD1-228ENST00000619157 BMP2KQ9NSY1 1161 aaPredicted RBP17.94■□□□□ 0.46
CBWD1-228ENST00000619157 NUBP1P53384 320 aa17.83■□□□□ 0.44
CBWD1-228ENST00000619157 PLSCR2Q9NRY7 297 aa17.82■□□□□ 0.44
CBWD1-228ENST00000619157 TIE1P35590 1138 aa17.81■□□□□ 0.44
CBWD1-228ENST00000619157 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
CBWD1-228ENST00000619157 POTEFA5A3E0 1075 aa17.8■□□□□ 0.44
CBWD1-228ENST00000619157 TTLL13PA6NNM8 815 aa17.78■□□□□ 0.44
CBWD1-228ENST00000619157 PCDHB13Q9Y5F0 798 aa17.78■□□□□ 0.44
CBWD1-228ENST00000619157 POTEMA6NI47 508 aa17.74■□□□□ 0.43
CBWD1-228ENST00000619157 MAMSTRQ6ZN01 415 aa17.74■□□□□ 0.43
CBWD1-228ENST00000619157 FAM212AQ96EL1 285 aa17.72■□□□□ 0.43
CBWD1-228ENST00000619157 SCUBE2Q9NQ36 999 aa17.7■□□□□ 0.42
CBWD1-228ENST00000619157 COLQQ9Y215 455 aaPredicted RBP17.7■□□□□ 0.42
CBWD1-228ENST00000619157 POTEGQ6S5H5 508 aa17.69■□□□□ 0.42
CBWD1-228ENST00000619157 IFNL1Q8IU54 200 aa17.69■□□□□ 0.42
CBWD1-228ENST00000619157 TRIM35Q9UPQ4 493 aa17.68■□□□□ 0.42
CBWD1-228ENST00000619157 SEC24BO95487 1268 aa17.67■□□□□ 0.42
CBWD1-228ENST00000619157 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
CBWD1-228ENST00000619157 TMEM106CQ9BVX2 250 aa17.58■□□□□ 0.4
CBWD1-228ENST00000619157 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
CBWD1-228ENST00000619157 FAM163AQ96GL9 167 aaPredicted RBP17.57■□□□□ 0.4
CBWD1-228ENST00000619157 LCE2DQ5TA82 110 aaPredicted RBP17.56■□□□□ 0.4
CBWD1-228ENST00000619157 PYGBP11216 843 aa17.55■□□□□ 0.4
CBWD1-228ENST00000619157 IER5LQ5T953 404 aa17.54■□□□□ 0.4
CBWD1-228ENST00000619157 FBXO3Q9UK99 471 aa17.53■□□□□ 0.4
CBWD1-228ENST00000619157 PCDHB8Q9UN66 801 aa17.45■□□□□ 0.38
CBWD1-228ENST00000619157 VASPP50552 380 aaPredicted RBP17.42■□□□□ 0.38
CBWD1-228ENST00000619157 KLHL34Q8N239 644 aa17.42■□□□□ 0.38
CBWD1-228ENST00000619157 PLCG2P16885 1265 aa17.41■□□□□ 0.38
CBWD1-228ENST00000619157 IRX5P78411 483 aaPredicted RBP17.36■□□□□ 0.37
CBWD1-228ENST00000619157 SLAIN1Q8ND83 568 aa17.35■□□□□ 0.37
CBWD1-228ENST00000619157 PCDH10Q9P2E7 1040 aa17.3■□□□□ 0.36
CBWD1-228ENST00000619157 GSE1Q14687 1217 aa17.26■□□□□ 0.35
CBWD1-228ENST00000619157 OCEL1Q9H607 264 aa17.26■□□□□ 0.35
CBWD1-228ENST00000619157 ZNF467Q7Z7K2 595 aaPredicted RBP17.19■□□□□ 0.34
CBWD1-228ENST00000619157 ST18O60284 1047 aa17.17■□□□□ 0.34
CBWD1-228ENST00000619157 GOLGA2Q08379 1002 aa17.13■□□□□ 0.33
CBWD1-228ENST00000619157 CDAN1Q8IWY9 1227 aa17.11■□□□□ 0.33
CBWD1-228ENST00000619157 PDCD7Q8N8D1 485 aaKnown RBP17.11■□□□□ 0.33
CBWD1-228ENST00000619157 CHRM1P11229 460 aaPredicted RBP17.1■□□□□ 0.33
CBWD1-228ENST00000619157 PSEN1P49768 467 aa17.1■□□□□ 0.33
CBWD1-228ENST00000619157 MKRN3Q13064 507 aaKnown RBP17.1■□□□□ 0.33
CBWD1-228ENST00000619157 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
CBWD1-228ENST00000619157 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.1■□□□□ 0.33
CBWD1-228ENST00000619157 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
CBWD1-228ENST00000619157 SPOCK2Q92563 424 aa17.06■□□□□ 0.32
CBWD1-228ENST00000619157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■■■■□ 25.6
CBWD1-228ENST00000619157 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
CBWD1-228ENST00000619157 PDAP1Q13442 181 aaKnown RBP16.98■□□□□ 0.31
CBWD1-228ENST00000619157 SNPHO15079 494 aa16.94■□□□□ 0.3
CBWD1-228ENST00000619157 MARVELD3Q96A59 401 aa16.94■□□□□ 0.3
CBWD1-228ENST00000619157 L3MBTL3Q96JM7 780 aaPredicted RBP16.94■□□□□ 0.3
CBWD1-228ENST00000619157 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
CBWD1-228ENST00000619157 DPY19L2Q6NUT2 758 aa16.91■□□□□ 0.3
CBWD1-228ENST00000619157 TMEM121BQ9BXQ6 578 aaPredicted RBP16.89■□□□□ 0.29
CBWD1-228ENST00000619157 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.28
CBWD1-228ENST00000619157 EMP3P54852 163 aa16.76■□□□□ 0.27
CBWD1-228ENST00000619157 G3V3G9 751 aa16.75■□□□□ 0.27
CBWD1-228ENST00000619157 BOLA1Q9Y3E2 137 aa16.75■□□□□ 0.27
CBWD1-228ENST00000619157 EFCAB3Q8N7B9 438 aa16.7■□□□□ 0.26
CBWD1-228ENST00000619157 SPNS2Q8IVW8 549 aa16.68■□□□□ 0.26
CBWD1-228ENST00000619157 FAM205CA6NFA0 338 aa16.66■□□□□ 0.26
CBWD1-228ENST00000619157 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
CBWD1-228ENST00000619157 POTEB3A0JP26 581 aa16.65■□□□□ 0.26
CBWD1-228ENST00000619157 MMRN1Q13201 1228 aa16.65■□□□□ 0.26
CBWD1-228ENST00000619157 POTEBQ6S5H4 581 aa16.65■□□□□ 0.26
CBWD1-228ENST00000619157 HS3ST6Q96QI5 342 aa16.64■□□□□ 0.25
CBWD1-228ENST00000619157 HOXB3P14651 431 aaPredicted RBP16.61■□□□□ 0.25
CBWD1-228ENST00000619157 RNF25Q96BH1 459 aaPredicted RBP16.6■□□□□ 0.25
CBWD1-228ENST00000619157 RIOK3O14730 519 aaKnown RBP16.56■□□□□ 0.24
CBWD1-228ENST00000619157 KRTAP3-3Q9BYR6 98 aa16.55■□□□□ 0.24
CBWD1-228ENST00000619157 KRTAP3-2Q9BYR7 98 aa16.55■□□□□ 0.24
CBWD1-228ENST00000619157 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
CBWD1-228ENST00000619157 ZFP91Q96JP5 570 aaPredicted RBP16.54■□□□□ 0.24
CBWD1-228ENST00000619157 ZNF710Q8N1W2 664 aa16.53■□□□□ 0.24
CBWD1-228ENST00000619157 MICALL2Q8IY33 904 aa16.5■□□□□ 0.23
CBWD1-228ENST00000619157 DOK7Q18PE1 504 aa16.47■□□□□ 0.23
CBWD1-228ENST00000619157 TMEM92Q6UXU6 159 aa16.47■□□□□ 0.23
CBWD1-228ENST00000619157 MS4A4AQ96JQ5 239 aa16.47■□□□□ 0.23
CBWD1-228ENST00000619157 PHF8Q9UPP1 1060 aa16.47■□□□□ 0.23
CBWD1-228ENST00000619157 VGFO15240 615 aaPredicted RBP16.46■□□□□ 0.23
CBWD1-228ENST00000619157 HOXB1P14653 301 aaPredicted RBP16.45■□□□□ 0.22
CBWD1-228ENST00000619157 SOX12O15370 315 aa16.43■□□□□ 0.22
CBWD1-228ENST00000619157 ERBB3P21860 1342 aa16.41■□□□□ 0.22
CBWD1-228ENST00000619157 RIMBP2O15034 1052 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms