RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SLC39A7Q92504 469 aa12□□□□□ -0.49
TARDBP-220ENST00000618606 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
TARDBP-220ENST00000618606 METRNQ9UJH8 293 aa12□□□□□ -0.49
TARDBP-220ENST00000618606 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
TARDBP-220ENST00000618606 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
TARDBP-220ENST00000618606 KIF12Q96FN5 646 aa11.93□□□□□ -0.5
TARDBP-220ENST00000618606 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
TARDBP-220ENST00000618606 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
TARDBP-220ENST00000618606 POTEMA6NI47 508 aa11.9□□□□□ -0.5
TARDBP-220ENST00000618606 ATN1P54259 1190 aaPredicted RBP11.9□□□□□ -0.5
TARDBP-220ENST00000618606 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
TARDBP-220ENST00000618606 MIER1Q8N108 512 aa11.88□□□□□ -0.51
TARDBP-220ENST00000618606 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
TARDBP-220ENST00000618606 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-220ENST00000618606 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
TARDBP-220ENST00000618606 MAP3K13O43283 966 aa11.83□□□□□ -0.52
TARDBP-220ENST00000618606 TIE1P35590 1138 aa11.83□□□□□ -0.52
TARDBP-220ENST00000618606 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
TARDBP-220ENST00000618606 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
TARDBP-220ENST00000618606 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
TARDBP-220ENST00000618606 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
TARDBP-220ENST00000618606 SGIP1Q9BQI5 828 aa11.75□□□□□ -0.53
TARDBP-220ENST00000618606 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
TARDBP-220ENST00000618606 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
TARDBP-220ENST00000618606 LCE2DQ5TA82 110 aaPredicted RBP11.73□□□□□ -0.53
TARDBP-220ENST00000618606 ZBTB47Q9UFB7 747 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-220ENST00000618606 NUBP1P53384 320 aa11.69□□□□□ -0.54
TARDBP-220ENST00000618606 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
TARDBP-220ENST00000618606 SEC24BO95487 1268 aa11.68□□□□□ -0.54
TARDBP-220ENST00000618606 COLQQ9Y215 455 aaPredicted RBP11.68□□□□□ -0.54
TARDBP-220ENST00000618606 PCDHB13Q9Y5F0 798 aa11.68□□□□□ -0.54
TARDBP-220ENST00000618606 IER5LQ5T953 404 aa11.67□□□□□ -0.54
TARDBP-220ENST00000618606 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
TARDBP-220ENST00000618606 IFNL1Q8IU54 200 aa11.61□□□□□ -0.55
TARDBP-220ENST00000618606 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
TARDBP-220ENST00000618606 TMEM106CQ9BVX2 250 aa11.55□□□□□ -0.56
TARDBP-220ENST00000618606 FKBP8Q14318 412 aa11.54□□□□□ -0.56
TARDBP-220ENST00000618606 PLCG2P16885 1265 aa11.5□□□□□ -0.57
TARDBP-220ENST00000618606 IRX5P78411 483 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-220ENST00000618606 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
TARDBP-220ENST00000618606 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
TARDBP-220ENST00000618606 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
TARDBP-220ENST00000618606 PYGBP11216 843 aa11.43□□□□□ -0.58
TARDBP-220ENST00000618606 OCEL1Q9H607 264 aa11.43□□□□□ -0.58
TARDBP-220ENST00000618606 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
TARDBP-220ENST00000618606 ST18O60284 1047 aa11.42□□□□□ -0.58
TARDBP-220ENST00000618606 PCDHB8Q9UN66 801 aa11.38□□□□□ -0.59
TARDBP-220ENST00000618606 TMEM121BQ9BXQ6 578 aaPredicted RBP11.33□□□□□ -0.6
TARDBP-220ENST00000618606 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.33□□□□□ -0.6
TARDBP-220ENST00000618606 SNPHO15079 494 aa11.32□□□□□ -0.6
TARDBP-220ENST00000618606 GSE1Q14687 1217 aa11.32□□□□□ -0.6
TARDBP-220ENST00000618606 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
TARDBP-220ENST00000618606 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
TARDBP-220ENST00000618606 CHRM1P11229 460 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-220ENST00000618606 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-220ENST00000618606 KLHL34Q8N239 644 aa11.27□□□□□ -0.61
TARDBP-220ENST00000618606 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
TARDBP-220ENST00000618606 MKRN3Q13064 507 aaKnown RBP11.23□□□□□ -0.61
TARDBP-220ENST00000618606 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
TARDBP-220ENST00000618606 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
TARDBP-220ENST00000618606 PSEN1P49768 467 aa11.19□□□□□ -0.62
TARDBP-220ENST00000618606 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
TARDBP-220ENST00000618606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.624e-7■■□□□ 11.4
TARDBP-220ENST00000618606 ILDR1Q86SU0 546 aaPredicted RBP11.17□□□□□ -0.62
TARDBP-220ENST00000618606 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
TARDBP-220ENST00000618606 MMRN1Q13201 1228 aa11.16□□□□□ -0.62
TARDBP-220ENST00000618606 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
TARDBP-220ENST00000618606 EMP3P54852 163 aa11.1□□□□□ -0.63
TARDBP-220ENST00000618606 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
TARDBP-220ENST00000618606 DPY19L2Q6NUT2 758 aa11.06□□□□□ -0.64
TARDBP-220ENST00000618606 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
TARDBP-220ENST00000618606 CABP2Q9NPB3 220 aa11.05□□□□□ -0.64
TARDBP-220ENST00000618606 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
TARDBP-220ENST00000618606 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
TARDBP-220ENST00000618606 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
TARDBP-220ENST00000618606 CIZ1Q9ULV3 898 aaPredicted RBP11.03□□□□□ -0.64
TARDBP-220ENST00000618606 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
TARDBP-220ENST00000618606 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
TARDBP-220ENST00000618606 G3V3G9 751 aa11.01□□□□□ -0.65
TARDBP-220ENST00000618606 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
TARDBP-220ENST00000618606 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
TARDBP-220ENST00000618606 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-220ENST00000618606 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
TARDBP-220ENST00000618606 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
TARDBP-220ENST00000618606 DOK7Q18PE1 504 aa10.91□□□□□ -0.66
TARDBP-220ENST00000618606 ZNF710Q8N1W2 664 aa10.91□□□□□ -0.66
TARDBP-220ENST00000618606 EFCAB3Q8N7B9 438 aa10.89□□□□□ -0.67
TARDBP-220ENST00000618606 ERBB3P21860 1342 aa10.84□□□□□ -0.67
TARDBP-220ENST00000618606 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
TARDBP-220ENST00000618606 MICALL2Q8IY33 904 aa10.82□□□□□ -0.68
TARDBP-220ENST00000618606 SOX12O15370 315 aa10.81□□□□□ -0.68
TARDBP-220ENST00000618606 ZSWIM6Q9HCJ5 1215 aa10.81□□□□□ -0.68
TARDBP-220ENST00000618606 TMEM92Q6UXU6 159 aa10.8□□□□□ -0.68
TARDBP-220ENST00000618606 RIOK3O14730 519 aaKnown RBP10.77□□□□□ -0.69
TARDBP-220ENST00000618606 VARS2Q5ST30 1063 aaKnown RBP10.77□□□□□ -0.69
TARDBP-220ENST00000618606 MS4A4AQ96JQ5 239 aa10.75□□□□□ -0.69
TARDBP-220ENST00000618606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-220ENST00000618606 GPR153Q6NV75 609 aa10.74□□□□□ -0.69
TARDBP-220ENST00000618606 RNF25Q96BH1 459 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-220ENST00000618606 ZFP91Q96JP5 570 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms