RNA–Protein interactions for RNA: ENST00000617708.1

GTF2IRD2B-207, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-207ENST00000617708 CCDC61Q9Y6R9 512 aa16.92■□□□□ 0.3
GTF2IRD2B-207ENST00000617708 POTEB2H3BUK9 544 aa16.91■□□□□ 0.3
GTF2IRD2B-207ENST00000617708 MIER1Q8N108 512 aa16.9■□□□□ 0.3
GTF2IRD2B-207ENST00000617708 ATMINO43313 823 aaPredicted RBP16.88■□□□□ 0.29
GTF2IRD2B-207ENST00000617708 SLC39A7Q92504 469 aa16.87■□□□□ 0.29
GTF2IRD2B-207ENST00000617708 METRNQ9UJH8 293 aa16.87■□□□□ 0.29
GTF2IRD2B-207ENST00000617708 C7P10643 843 aa16.83■□□□□ 0.28
GTF2IRD2B-207ENST00000617708 KIF12Q96FN5 646 aa16.82■□□□□ 0.28
GTF2IRD2B-207ENST00000617708 RASEFQ8IZ41 740 aa16.78■□□□□ 0.28
GTF2IRD2B-207ENST00000617708 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
GTF2IRD2B-207ENST00000617708 ATN1P54259 1190 aaPredicted RBP16.74■□□□□ 0.27
GTF2IRD2B-207ENST00000617708 POTEMA6NI47 508 aa16.71■□□□□ 0.27
GTF2IRD2B-207ENST00000617708 MAP3K13O43283 966 aa16.71■□□□□ 0.27
GTF2IRD2B-207ENST00000617708 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
GTF2IRD2B-207ENST00000617708 BMP2KQ9NSY1 1161 aaPredicted RBP16.69■□□□□ 0.26
GTF2IRD2B-207ENST00000617708 MAMSTRQ6ZN01 415 aa16.68■□□□□ 0.26
GTF2IRD2B-207ENST00000617708 TIE1P35590 1138 aa16.67■□□□□ 0.26
GTF2IRD2B-207ENST00000617708 POTEGQ6S5H5 508 aa16.66■□□□□ 0.26
GTF2IRD2B-207ENST00000617708 TRPC6Q9Y210 931 aa16.65■□□□□ 0.26
GTF2IRD2B-207ENST00000617708 POTEJP0CG39 1038 aa16.63■□□□□ 0.25
GTF2IRD2B-207ENST00000617708 FKBP8Q14318 412 aa16.61■□□□□ 0.25
GTF2IRD2B-207ENST00000617708 PCDH10Q9P2E7 1040 aa16.61■□□□□ 0.25
GTF2IRD2B-207ENST00000617708 SCUBE2Q9NQ36 999 aa16.58■□□□□ 0.24
GTF2IRD2B-207ENST00000617708 NUBP1P53384 320 aa16.57■□□□□ 0.24
GTF2IRD2B-207ENST00000617708 SGIP1Q9BQI5 828 aa16.57■□□□□ 0.24
GTF2IRD2B-207ENST00000617708 TTLL13PA6NNM8 815 aa16.55■□□□□ 0.24
GTF2IRD2B-207ENST00000617708 PCDHB13Q9Y5F0 798 aa16.55■□□□□ 0.24
GTF2IRD2B-207ENST00000617708 FAM212AQ96EL1 285 aa16.53■□□□□ 0.24
GTF2IRD2B-207ENST00000617708 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
GTF2IRD2B-207ENST00000617708 SEC24BO95487 1268 aa16.48■□□□□ 0.23
GTF2IRD2B-207ENST00000617708 TRIM35Q9UPQ4 493 aa16.45■□□□□ 0.22
GTF2IRD2B-207ENST00000617708 IER5LQ5T953 404 aa16.44■□□□□ 0.22
GTF2IRD2B-207ENST00000617708 IFNL1Q8IU54 200 aa16.43■□□□□ 0.22
GTF2IRD2B-207ENST00000617708 COLQQ9Y215 455 aaPredicted RBP16.42■□□□□ 0.22
GTF2IRD2B-207ENST00000617708 LCE2DQ5TA82 110 aaPredicted RBP16.39■□□□□ 0.21
GTF2IRD2B-207ENST00000617708 FBXO3Q9UK99 471 aa16.39■□□□□ 0.21
GTF2IRD2B-207ENST00000617708 TMEM106CQ9BVX2 250 aa16.35■□□□□ 0.21
GTF2IRD2B-207ENST00000617708 FAM163AQ96GL9 167 aaPredicted RBP16.34■□□□□ 0.21
GTF2IRD2B-207ENST00000617708 DCAF8Q5TAQ9 597 aa16.31■□□□□ 0.2
GTF2IRD2B-207ENST00000617708 PYGBP11216 843 aa16.25■□□□□ 0.19
GTF2IRD2B-207ENST00000617708 PLCG2P16885 1265 aa16.25■□□□□ 0.19
GTF2IRD2B-207ENST00000617708 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
GTF2IRD2B-207ENST00000617708 VASPP50552 380 aaPredicted RBP16.16■□□□□ 0.18
GTF2IRD2B-207ENST00000617708 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
GTF2IRD2B-207ENST00000617708 SLAIN1Q8ND83 568 aa16.16■□□□□ 0.18
GTF2IRD2B-207ENST00000617708 PCDHB8Q9UN66 801 aa16.15■□□□□ 0.18
GTF2IRD2B-207ENST00000617708 GSE1Q14687 1217 aa16.13■□□□□ 0.17
GTF2IRD2B-207ENST00000617708 OCEL1Q9H607 264 aa16.11■□□□□ 0.17
GTF2IRD2B-207ENST00000617708 ZNF467Q7Z7K2 595 aaPredicted RBP16.07■□□□□ 0.16
GTF2IRD2B-207ENST00000617708 CDAN1Q8IWY9 1227 aa16.02■□□□□ 0.16
GTF2IRD2B-207ENST00000617708 ST18O60284 1047 aa16■□□□□ 0.15
GTF2IRD2B-207ENST00000617708 GOLGA2Q08379 1002 aa15.99■□□□□ 0.15
GTF2IRD2B-207ENST00000617708 CHRM1P11229 460 aaPredicted RBP15.98■□□□□ 0.15
GTF2IRD2B-207ENST00000617708 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.98■□□□□ 0.15
GTF2IRD2B-207ENST00000617708 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
GTF2IRD2B-207ENST00000617708 SNPHO15079 494 aa15.92■□□□□ 0.14
GTF2IRD2B-207ENST00000617708 PDCD7Q8N8D1 485 aaKnown RBP15.91■□□□□ 0.14
GTF2IRD2B-207ENST00000617708 PSEN1P49768 467 aa15.9■□□□□ 0.14
GTF2IRD2B-207ENST00000617708 TMEM121BQ9BXQ6 578 aaPredicted RBP15.88■□□□□ 0.13
GTF2IRD2B-207ENST00000617708 C3orf67Q6ZVT6 689 aa15.87■□□□□ 0.13
GTF2IRD2B-207ENST00000617708 SPOCK2Q92563 424 aa15.86■□□□□ 0.13
GTF2IRD2B-207ENST00000617708 L3MBTL3Q96JM7 780 aaPredicted RBP15.86■□□□□ 0.13
GTF2IRD2B-207ENST00000617708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.84■□□□□ 0.13
GTF2IRD2B-207ENST00000617708 PDAP1Q13442 181 aaKnown RBP15.83■□□□□ 0.12
GTF2IRD2B-207ENST00000617708 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
GTF2IRD2B-207ENST00000617708 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
GTF2IRD2B-207ENST00000617708 ILDR1Q86SU0 546 aaPredicted RBP15.72■□□□□ 0.11
GTF2IRD2B-207ENST00000617708 CABP2Q9NPB3 220 aa15.72■□□□□ 0.11
GTF2IRD2B-207ENST00000617708 MARVELD3Q96A59 401 aa15.71■□□□□ 0.11
GTF2IRD2B-207ENST00000617708 G3V3G9 751 aa15.66■□□□□ 0.1
GTF2IRD2B-207ENST00000617708 MMRN1Q13201 1228 aa15.66■□□□□ 0.1
GTF2IRD2B-207ENST00000617708 SPNS2Q8IVW8 549 aa15.65■□□□□ 0.1
GTF2IRD2B-207ENST00000617708 EMP3P54852 163 aa15.63■□□□□ 0.09
GTF2IRD2B-207ENST00000617708 DPY19L2Q6NUT2 758 aa15.63■□□□□ 0.09
GTF2IRD2B-207ENST00000617708 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
GTF2IRD2B-207ENST00000617708 BOLA1Q9Y3E2 137 aa15.61■□□□□ 0.09
GTF2IRD2B-207ENST00000617708 HS3ST6Q96QI5 342 aa15.5■□□□□ 0.07
GTF2IRD2B-207ENST00000617708 FAM205CA6NFA0 338 aa15.49■□□□□ 0.07
GTF2IRD2B-207ENST00000617708 EFCAB3Q8N7B9 438 aa15.49■□□□□ 0.07
GTF2IRD2B-207ENST00000617708 HOXB3P14651 431 aaPredicted RBP15.44■□□□□ 0.06
GTF2IRD2B-207ENST00000617708 ZNF710Q8N1W2 664 aa15.43■□□□□ 0.06
GTF2IRD2B-207ENST00000617708 POTEB3A0JP26 581 aa15.42■□□□□ 0.06
GTF2IRD2B-207ENST00000617708 DOK7Q18PE1 504 aa15.42■□□□□ 0.06
GTF2IRD2B-207ENST00000617708 POTEBQ6S5H4 581 aa15.42■□□□□ 0.06
GTF2IRD2B-207ENST00000617708 RIOK3O14730 519 aaKnown RBP15.4■□□□□ 0.06
GTF2IRD2B-207ENST00000617708 KRTAP3-3Q9BYR6 98 aa15.4■□□□□ 0.06
GTF2IRD2B-207ENST00000617708 KRTAP3-2Q9BYR7 98 aa15.4■□□□□ 0.06
GTF2IRD2B-207ENST00000617708 HOXB1P14653 301 aaPredicted RBP15.37■□□□□ 0.05
GTF2IRD2B-207ENST00000617708 SOX12O15370 315 aa15.35■□□□□ 0.05
GTF2IRD2B-207ENST00000617708 RIMBP2O15034 1052 aa15.34■□□□□ 0.05
GTF2IRD2B-207ENST00000617708 VGFO15240 615 aaPredicted RBP15.34■□□□□ 0.05
GTF2IRD2B-207ENST00000617708 MICALL2Q8IY33 904 aa15.34■□□□□ 0.05
GTF2IRD2B-207ENST00000617708 RNF25Q96BH1 459 aaPredicted RBP15.34■□□□□ 0.05
GTF2IRD2B-207ENST00000617708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.32■□□□□ 0.04
GTF2IRD2B-207ENST00000617708 ZFP91Q96JP5 570 aaPredicted RBP15.32■□□□□ 0.04
GTF2IRD2B-207ENST00000617708 ERBB3P21860 1342 aa15.29■□□□□ 0.04
GTF2IRD2B-207ENST00000617708 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
GTF2IRD2B-207ENST00000617708 TMEM92Q6UXU6 159 aa15.25■□□□□ 0.03
GTF2IRD2B-207ENST00000617708 PHF8Q9UPP1 1060 aa15.25■□□□□ 0.03
GTF2IRD2B-207ENST00000617708 ZSWIM6Q9HCJ5 1215 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms