RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
PDE6A-205ENST00000617647 B4GALNT3Q6L9W6 998 aa10.06□□□□□ -0.8
PDE6A-205ENST00000617647 PPP4R2Q9NY27 417 aa10.05□□□□□ -0.8
PDE6A-205ENST00000617647 HSP90AA2PQ14568 343 aaPredicted RBP10.05□□□□□ -0.8
PDE6A-205ENST00000617647 BRPF3Q9ULD4 1205 aa10.05□□□□□ -0.8
PDE6A-205ENST00000617647 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
PDE6A-205ENST00000617647 PPM1GO15355 546 aaPredicted RBP10.04□□□□□ -0.8
PDE6A-205ENST00000617647 ARXQ96QS3 562 aa10.04□□□□□ -0.8
PDE6A-205ENST00000617647 PPP4R3CPQ6ZMV5 832 aa10.04□□□□□ -0.8
PDE6A-205ENST00000617647 HSP90AA1P07900 732 aaKnown RBP10.03□□□□□ -0.8
PDE6A-205ENST00000617647 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
PDE6A-205ENST00000617647 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
PDE6A-205ENST00000617647 RSF1Q96T23 1441 aaPredicted RBP10.01□□□□□ -0.81
PDE6A-205ENST00000617647 NPM3O75607 178 aaKnown RBP10□□□□□ -0.81
PDE6A-205ENST00000617647 EIF4G1Q04637 1599 aaKnown RBP10□□□□□ -0.81
PDE6A-205ENST00000617647 NACADO15069 1562 aa9.99□□□□□ -0.81
PDE6A-205ENST00000617647 CNGB1Q14028 1251 aaPredicted RBP9.98□□□□□ -0.81
PDE6A-205ENST00000617647 PDE4CQ08493 712 aa9.97□□□□□ -0.81
PDE6A-205ENST00000617647 RB1CC1Q8TDY2 1594 aa9.96□□□□□ -0.82
PDE6A-205ENST00000617647 GSE1Q14687 1217 aa9.95□□□□□ -0.82
PDE6A-205ENST00000617647 USP35Q9P2H5 1018 aa9.94□□□□□ -0.82
PDE6A-205ENST00000617647 HIRIP3Q9BW71 556 aaPredicted RBP9.94□□□□□ -0.82
PDE6A-205ENST00000617647 PNNQ9H307 717 aaKnown RBP9.93□□□□□ -0.82
PDE6A-205ENST00000617647 FAM9BQ8IZU0 186 aa9.9□□□□□ -0.83
PDE6A-205ENST00000617647 DDRGK1Q96HY6 314 aa9.88□□□□□ -0.83
PDE6A-205ENST00000617647 RBM10P98175 930 aaKnown RBP9.86□□□□□ -0.83
PDE6A-205ENST00000617647 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
PDE6A-205ENST00000617647 FAM43AQ8N2R8 423 aa9.85□□□□□ -0.83
PDE6A-205ENST00000617647 FRAT1Q92837 279 aaPredicted RBP9.84□□□□□ -0.83
PDE6A-205ENST00000617647 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
PDE6A-205ENST00000617647 CCER2I3L3R5 266 aa9.83□□□□□ -0.84
PDE6A-205ENST00000617647 MROH2BQ7Z745 1585 aa9.82□□□□□ -0.84
PDE6A-205ENST00000617647 TNNT2P45379 298 aaPredicted RBP9.82□□□□□ -0.84
PDE6A-205ENST00000617647 RRP9O43818 475 aaKnown RBP9.82□□□□□ -0.84
PDE6A-205ENST00000617647 ARID3AQ99856 593 aa9.82□□□□□ -0.84
PDE6A-205ENST00000617647 PDIA4P13667 645 aaKnown RBP9.81□□□□□ -0.84
PDE6A-205ENST00000617647 POLR3GLQ9BT43 218 aa9.81□□□□□ -0.84
PDE6A-205ENST00000617647 TRIM44Q96DX7 344 aaPredicted RBP9.8□□□□□ -0.84
PDE6A-205ENST00000617647 WIZO95785 1651 aa9.79□□□□□ -0.84
PDE6A-205ENST00000617647 BAZ1AQ9NRL2 1556 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-205ENST00000617647 L1TD1Q5T7N2 865 aaKnown RBP9.79□□□□□ -0.84
PDE6A-205ENST00000617647 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-205ENST00000617647 CDK11BP21127 795 aaKnown RBP9.78□□□□□ -0.84
PDE6A-205ENST00000617647 NCLP19338 710 aaKnown RBP9.77□□□□□ -0.85
PDE6A-205ENST00000617647 SIN3AQ96ST3 1273 aa9.77□□□□□ -0.85
PDE6A-205ENST00000617647 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-205ENST00000617647 MRS2Q9HD23 443 aa9.77□□□□□ -0.85
PDE6A-205ENST00000617647 NFKBIBQ15653 356 aa9.76□□□□□ -0.85
PDE6A-205ENST00000617647 CEP162Q5TB80 1403 aa9.76□□□□□ -0.85
PDE6A-205ENST00000617647 SLC4A3P48751 1232 aa9.76□□□□□ -0.85
PDE6A-205ENST00000617647 UNC13AQ9UPW8 1703 aa9.75□□□□□ -0.85
PDE6A-205ENST00000617647 SENP3-EIF4A1A0A087X0R7 540 aa9.75□□□□□ -0.85
PDE6A-205ENST00000617647 FGD1P98174 961 aa9.74□□□□□ -0.85
PDE6A-205ENST00000617647 ANP32BQ92688 251 aaKnown RBP9.73□□□□□ -0.85
PDE6A-205ENST00000617647 WASHC2AQ641Q2 1341 aa9.72□□□□□ -0.85
PDE6A-205ENST00000617647 CANXP27824 592 aaKnown RBP9.72□□□□□ -0.85
PDE6A-205ENST00000617647 AAMPQ13685 434 aa9.71□□□□□ -0.86
PDE6A-205ENST00000617647 WASHC2CQ9Y4E1 1318 aa9.7□□□□□ -0.86
PDE6A-205ENST00000617647 TCERG1O14776 1098 aaKnown RBP9.7□□□□□ -0.86
PDE6A-205ENST00000617647 PDE4AP27815 886 aa9.7□□□□□ -0.86
PDE6A-205ENST00000617647 BBXQ8WY36 941 aaPredicted RBP9.7□□□□□ -0.86
PDE6A-205ENST00000617647 RGS3P49796 1198 aa9.69□□□□□ -0.86
PDE6A-205ENST00000617647 GZF1Q9H116 711 aaPredicted RBP9.68□□□□□ -0.86
PDE6A-205ENST00000617647 TOP2AP11388 1531 aaKnown RBP9.68□□□□□ -0.86
PDE6A-205ENST00000617647 BAZ1BQ9UIG0 1483 aaKnown RBP9.67□□□□□ -0.86
PDE6A-205ENST00000617647 PIAS4Q8N2W9 510 aaPredicted RBP9.67□□□□□ -0.86
PDE6A-205ENST00000617647 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
PDE6A-205ENST00000617647 GOLGA6L3A6NEY3 463 aa9.67□□□□□ -0.86
PDE6A-205ENST00000617647 SMARCA4P51532 1647 aa9.66□□□□□ -0.86
PDE6A-205ENST00000617647 EEA1Q15075 1411 aa9.66□□□□□ -0.86
PDE6A-205ENST00000617647 ZNF326Q5BKZ1 582 aaKnown RBP9.66□□□□□ -0.86
PDE6A-205ENST00000617647 FRAT2O75474 233 aaPredicted RBP9.65□□□□□ -0.86
PDE6A-205ENST00000617647 FAM13BQ9NYF5 915 aa9.65□□□□□ -0.86
PDE6A-205ENST00000617647 FAM50AQ14320 339 aaKnown RBP9.65□□□□□ -0.86
PDE6A-205ENST00000617647 BECN1Q14457 450 aa9.64□□□□□ -0.87
PDE6A-205ENST00000617647 DHX57Q6P158 1386 aaKnown RBP9.63□□□□□ -0.87
PDE6A-205ENST00000617647 TONSLQ96HA7 1378 aa9.63□□□□□ -0.87
PDE6A-205ENST00000617647 TAF7LQ5H9L4 462 aa9.62□□□□□ -0.87
PDE6A-205ENST00000617647 PAXIP1Q6ZW49 1069 aaPredicted RBP9.62□□□□□ -0.87
PDE6A-205ENST00000617647 SLKQ9H2G2 1235 aaPredicted RBP9.62□□□□□ -0.87
PDE6A-205ENST00000617647 MYH16Q9H6N6 1097 aa9.61□□□□□ -0.87
PDE6A-205ENST00000617647 ZHX1Q9UKY1 873 aaPredicted RBP9.61□□□□□ -0.87
PDE6A-205ENST00000617647 MSNP26038 577 aaKnown RBP9.6□□□□□ -0.87
PDE6A-205ENST00000617647 PDCL3Q9H2J4 239 aa9.6□□□□□ -0.87
PDE6A-205ENST00000617647 NAP1L2Q9ULW6 460 aaPredicted RBP9.6□□□□□ -0.87
PDE6A-205ENST00000617647 RRAGDQ9NQL2 400 aaPredicted RBP9.6□□□□□ -0.87
PDE6A-205ENST00000617647 SMARCA2P51531 1590 aa9.6□□□□□ -0.87
PDE6A-205ENST00000617647 TPM2P07951 284 aa9.6□□□□□ -0.87
PDE6A-205ENST00000617647 CHMP4BQ9H444 224 aaKnown RBP9.6□□□□□ -0.87
PDE6A-205ENST00000617647 ABCC8Q09428 1581 aa9.6□□□□□ -0.87
PDE6A-205ENST00000617647 CCDC88BA6NC98 1476 aa9.59□□□□□ -0.87
PDE6A-205ENST00000617647 WRNQ14191 1432 aaPredicted RBP eCLIP9.59□□□□□ -0.87
PDE6A-205ENST00000617647 UPF2Q9HAU5 1272 aaKnown RBP9.59□□□□□ -0.87
PDE6A-205ENST00000617647 PPP1R15AO75807 674 aaPredicted RBP9.58□□□□□ -0.88
PDE6A-205ENST00000617647 DNTTIP2Q5QJE6 756 aaKnown RBP9.58□□□□□ -0.88
PDE6A-205ENST00000617647 PRDM10Q9NQV6 1147 aa9.57□□□□□ -0.88
PDE6A-205ENST00000617647 TNIKQ9UKE5 1360 aa9.57□□□□□ -0.88
PDE6A-205ENST00000617647 DCAF11Q8TEB1 546 aa9.56□□□□□ -0.88
PDE6A-205ENST00000617647 PEG3Q9GZU2 1588 aa9.56□□□□□ -0.88
PDE6A-205ENST00000617647 CALD1Q05682 793 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms