RNA–Protein interactions for RNA: ENST00000617302.1

PCDH18-207, Transcript of protocadherin 18, humanhuman

TSL 5

Gene PCDH18, Length 895 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-207ENST00000617302 MIER1Q8N108 512 aa12.62□□□□□ -0.39
PCDH18-207ENST00000617302 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
PCDH18-207ENST00000617302 ASTLQ6HA08 431 aaPredicted RBP12.6□□□□□ -0.39
PCDH18-207ENST00000617302 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
PCDH18-207ENST00000617302 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
PCDH18-207ENST00000617302 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
PCDH18-207ENST00000617302 FKBP8Q14318 412 aa12.56□□□□□ -0.4
PCDH18-207ENST00000617302 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
PCDH18-207ENST00000617302 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
PCDH18-207ENST00000617302 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
PCDH18-207ENST00000617302 TRPC6Q9Y210 931 aa12.52□□□□□ -0.41
PCDH18-207ENST00000617302 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
PCDH18-207ENST00000617302 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
PCDH18-207ENST00000617302 MAP3K13O43283 966 aa12.48□□□□□ -0.41
PCDH18-207ENST00000617302 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
PCDH18-207ENST00000617302 POTEJP0CG39 1038 aa12.47□□□□□ -0.41
PCDH18-207ENST00000617302 NUBP1P53384 320 aa12.47□□□□□ -0.41
PCDH18-207ENST00000617302 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
PCDH18-207ENST00000617302 BMP2KQ9NSY1 1161 aaPredicted RBP12.45□□□□□ -0.42
PCDH18-207ENST00000617302 C7P10643 843 aa12.44□□□□□ -0.42
PCDH18-207ENST00000617302 POTEFA5A3E0 1075 aa12.4□□□□□ -0.42
PCDH18-207ENST00000617302 TIE1P35590 1138 aa12.38□□□□□ -0.43
PCDH18-207ENST00000617302 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
PCDH18-207ENST00000617302 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
PCDH18-207ENST00000617302 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
PCDH18-207ENST00000617302 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
PCDH18-207ENST00000617302 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
PCDH18-207ENST00000617302 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
PCDH18-207ENST00000617302 ABCC9O60706 1549 aa12.3□□□□□ -0.44
PCDH18-207ENST00000617302 FAM212AQ96EL1 285 aa12.29□□□□□ -0.44
PCDH18-207ENST00000617302 COLQQ9Y215 455 aaPredicted RBP12.28□□□□□ -0.44
PCDH18-207ENST00000617302 POTEMA6NI47 508 aa12.27□□□□□ -0.45
PCDH18-207ENST00000617302 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
PCDH18-207ENST00000617302 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
PCDH18-207ENST00000617302 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
PCDH18-207ENST00000617302 POTEGQ6S5H5 508 aa12.22□□□□□ -0.45
PCDH18-207ENST00000617302 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
PCDH18-207ENST00000617302 VASPP50552 380 aaPredicted RBP12.19□□□□□ -0.46
PCDH18-207ENST00000617302 PYGBP11216 843 aa12.18□□□□□ -0.46
PCDH18-207ENST00000617302 IER5LQ5T953 404 aa12.18□□□□□ -0.46
PCDH18-207ENST00000617302 SCUBE2Q9NQ36 999 aa12.18□□□□□ -0.46
PCDH18-207ENST00000617302 MYO15BQ96JP2 1530 aa12.17□□□□□ -0.46
PCDH18-207ENST00000617302 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
PCDH18-207ENST00000617302 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
PCDH18-207ENST00000617302 SEC24BO95487 1268 aa12.16□□□□□ -0.46
PCDH18-207ENST00000617302 PCDHB8Q9UN66 801 aa12.12□□□□□ -0.47
PCDH18-207ENST00000617302 IRX5P78411 483 aaPredicted RBP12.09□□□□□ -0.47
PCDH18-207ENST00000617302 NACADO15069 1562 aa12.09□□□□□ -0.47
PCDH18-207ENST00000617302 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
PCDH18-207ENST00000617302 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
PCDH18-207ENST00000617302 DCAF8L2P0C7V8 631 aa12.05□□□□□ -0.48
PCDH18-207ENST00000617302 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
PCDH18-207ENST00000617302 PLCG2P16885 1265 aa12.02□□□□□ -0.49
PCDH18-207ENST00000617302 GSE1Q14687 1217 aa12.02□□□□□ -0.49
PCDH18-207ENST00000617302 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.49
PCDH18-207ENST00000617302 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
PCDH18-207ENST00000617302 CHRM1P11229 460 aaPredicted RBP11.98□□□□□ -0.49
PCDH18-207ENST00000617302 RB1CC1Q8TDY2 1594 aa11.97□□□□□ -0.49
PCDH18-207ENST00000617302 OCEL1Q9H607 264 aa11.97□□□□□ -0.49
PCDH18-207ENST00000617302 ZNF467Q7Z7K2 595 aaPredicted RBP11.95□□□□□ -0.5
PCDH18-207ENST00000617302 SLAIN1Q8ND83 568 aa11.95□□□□□ -0.5
PCDH18-207ENST00000617302 SCRIBQ14160 1630 aa11.94□□□□□ -0.5
PCDH18-207ENST00000617302 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
PCDH18-207ENST00000617302 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
PCDH18-207ENST00000617302 PSEN1P49768 467 aa11.88□□□□□ -0.51
PCDH18-207ENST00000617302 ST18O60284 1047 aa11.87□□□□□ -0.51
PCDH18-207ENST00000617302 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
PCDH18-207ENST00000617302 CIZ1Q9ULV3 898 aaPredicted RBP11.83□□□□□ -0.52
PCDH18-207ENST00000617302 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
PCDH18-207ENST00000617302 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
PCDH18-207ENST00000617302 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
PCDH18-207ENST00000617302 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
PCDH18-207ENST00000617302 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
PCDH18-207ENST00000617302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.52
PCDH18-207ENST00000617302 CDAN1Q8IWY9 1227 aa11.76□□□□□ -0.53
PCDH18-207ENST00000617302 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
PCDH18-207ENST00000617302 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
PCDH18-207ENST00000617302 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
PCDH18-207ENST00000617302 L3MBTL3Q96JM7 780 aaPredicted RBP11.73□□□□□ -0.53
PCDH18-207ENST00000617302 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
PCDH18-207ENST00000617302 TMEM121BQ9BXQ6 578 aaPredicted RBP11.69□□□□□ -0.54
PCDH18-207ENST00000617302 SNPHO15079 494 aa11.68□□□□□ -0.54
PCDH18-207ENST00000617302 MARVELD3Q96A59 401 aa11.66□□□□□ -0.54
PCDH18-207ENST00000617302 TRIM41Q8WV44 630 aa11.65□□□□□ -0.54
PCDH18-207ENST00000617302 RNF25Q96BH1 459 aaPredicted RBP11.65□□□□□ -0.54
PCDH18-207ENST00000617302 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
PCDH18-207ENST00000617302 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
PCDH18-207ENST00000617302 CECR2Q9BXF3 1484 aa11.59□□□□□ -0.55
PCDH18-207ENST00000617302 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
PCDH18-207ENST00000617302 RIOK3O14730 519 aaKnown RBP11.56□□□□□ -0.56
PCDH18-207ENST00000617302 HOXB3P14651 431 aaPredicted RBP11.56□□□□□ -0.56
PCDH18-207ENST00000617302 POTEBQ6S5H4 581 aa11.56□□□□□ -0.56
PCDH18-207ENST00000617302 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.53□□□□□ -0.56
PCDH18-207ENST00000617302 EMP3P54852 163 aa11.53□□□□□ -0.56
PCDH18-207ENST00000617302 ZFP91Q96JP5 570 aaPredicted RBP11.53□□□□□ -0.56
PCDH18-207ENST00000617302 MROH2BQ7Z745 1585 aa11.52□□□□□ -0.57
PCDH18-207ENST00000617302 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.57
PCDH18-207ENST00000617302 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
PCDH18-207ENST00000617302 G3V3G9 751 aa11.5□□□□□ -0.57
PCDH18-207ENST00000617302 SPNS2Q8IVW8 549 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms