RNA–Protein interactions for RNA: ENST00000615603.4

FOXP1-222, Transcript of forkhead box P1, human

TSL 5 BASIC

Gene FOXP1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FOXP1-222	ENST00000615603	HSP90AA1	P07900	732 aa	Known RBP	19.13	■□□□□ 0.65
FOXP1-222	ENST00000615603	FKBP8	Q14318	412 aa		19.12	■□□□□ 0.65
FOXP1-222	ENST00000615603	RSF1	Q96T23	1441 aa	Predicted RBP	19.12	■□□□□ 0.65
FOXP1-222	ENST00000615603	MRS2	Q9HD23	443 aa		19.11	■□□□□ 0.65
FOXP1-222	ENST00000615603	ACIN1	Q9UKV3	1341 aa	Known RBP	19.09	■□□□□ 0.65
FOXP1-222	ENST00000615603	WRN	Q14191	1432 aa	Predicted RBP eCLIP	19.08	■□□□□ 0.65
FOXP1-222	ENST00000615603	HAP1	P54257	671 aa	Predicted RBP	19.08	■□□□□ 0.64
FOXP1-222	ENST00000615603	UPF2	Q9HAU5	1272 aa	Known RBP	19.06	■□□□□ 0.64
FOXP1-222	ENST00000615603	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	19.05	■□□□□ 0.64
FOXP1-222	ENST00000615603	EIF4G2	P78344	907 aa	Known RBP eCLIP	19.05	■□□□□ 0.64
FOXP1-222	ENST00000615603	KIF27	Q86VH2	1401 aa		19.03	■□□□□ 0.64
FOXP1-222	ENST00000615603	TRH	P20396	242 aa	Predicted RBP	19.02	■□□□□ 0.64
FOXP1-222	ENST00000615603	NACAD	O15069	1562 aa		19.02	■□□□□ 0.64
FOXP1-222	ENST00000615603	DCAF1	Q9Y4B6	1507 aa		19.02	■□□□□ 0.64
FOXP1-222	ENST00000615603	GOLGA3	Q08378	1498 aa		19.01	■□□□□ 0.63
FOXP1-222	ENST00000615603	EEA1	Q15075	1411 aa		18.99	■□□□□ 0.63
FOXP1-222	ENST00000615603	CCDC136	Q96JN2	1154 aa		18.98	■□□□□ 0.63
FOXP1-222	ENST00000615603	CEP162	Q5TB80	1403 aa		18.96	■□□□□ 0.63
FOXP1-222	ENST00000615603	PPM1G	O15355	546 aa	Predicted RBP	18.95	■□□□□ 0.62
FOXP1-222	ENST00000615603	LMOD2	Q6P5Q4	547 aa		18.95	■□□□□ 0.62
FOXP1-222	ENST00000615603	MYH16	Q9H6N6	1097 aa		18.92	■□□□□ 0.62
FOXP1-222	ENST00000615603	ARX	Q96QS3	562 aa		18.91	■□□□□ 0.62
FOXP1-222	ENST00000615603	MLEC	Q14165	292 aa		18.89	■□□□□ 0.61
FOXP1-222	ENST00000615603	POGK	Q9P215	609 aa		18.89	■□□□□ 0.61
FOXP1-222	ENST00000615603	CFAP53	Q96M91	514 aa		18.88	■□□□□ 0.61
FOXP1-222	ENST00000615603	CARD11	Q9BXL7	1154 aa		18.88	■□□□□ 0.61
FOXP1-222	ENST00000615603	ANP32B	Q92688	251 aa	Known RBP	18.88	■□□□□ 0.61
FOXP1-222	ENST00000615603	CDCA8	Q53HL2	280 aa		18.87	■□□□□ 0.61
FOXP1-222	ENST00000615603	KNSTRN	Q9Y448	316 aa		18.87	■□□□□ 0.61
FOXP1-222	ENST00000615603	SENP3-EIF4A1	A0A087X0R7	540 aa		18.85	■□□□□ 0.61
FOXP1-222	ENST00000615603	IRX6	P78412	446 aa	Predicted RBP	18.84	■□□□□ 0.61
FOXP1-222	ENST00000615603	CEP164	Q9UPV0	1460 aa		18.82	■□□□□ 0.6
FOXP1-222	ENST00000615603	CCNB3	Q8WWL7	1395 aa		18.81	■□□□□ 0.6
FOXP1-222	ENST00000615603	MIER1	Q8N108	512 aa		18.8	■□□□□ 0.6
FOXP1-222	ENST00000615603	EIF4G1	Q04637	1599 aa	Known RBP	18.79	■□□□□ 0.6
FOXP1-222	ENST00000615603	TNIK	Q9UKE5	1360 aa		18.78	■□□□□ 0.6
FOXP1-222	ENST00000615603	NEUROD2	Q15784	382 aa		18.78	■□□□□ 0.6
FOXP1-222	ENST00000615603	CARMIL1	Q5VZK9	1371 aa		18.77	■□□□□ 0.59
FOXP1-222	ENST00000615603	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	18.77	■□□□□ 0.59
FOXP1-222	ENST00000615603	CUX2	O14529	1486 aa		18.76	■□□□□ 0.59
FOXP1-222	ENST00000615603	CECR2	Q9BXF3	1484 aa		18.76	■□□□□ 0.59
FOXP1-222	ENST00000615603	TNNT2	P45379	298 aa	Predicted RBP	18.75	■□□□□ 0.59
FOXP1-222	ENST00000615603	LAS1L	Q9Y4W2	734 aa	Known RBP	18.74	■□□□□ 0.59
FOXP1-222	ENST00000615603	SIN3A	Q96ST3	1273 aa		18.73	■□□□□ 0.59
FOXP1-222	ENST00000615603	MAPK8IP3	Q9UPT6	1336 aa		18.72	■□□□□ 0.59
FOXP1-222	ENST00000615603	GGT6	Q6P531	493 aa		18.71	■□□□□ 0.59
FOXP1-222	ENST00000615603	NUDC	Q9Y266	331 aa		18.71	■□□□□ 0.59
FOXP1-222	ENST00000615603	KANK1	Q14678	1352 aa		18.69	■□□□□ 0.58
FOXP1-222	ENST00000615603	HDGF	P51858	240 aa	Known RBP	18.68	■□□□□ 0.58
FOXP1-222	ENST00000615603	DCAF11	Q8TEB1	546 aa		18.67	■□□□□ 0.58
FOXP1-222	ENST00000615603	NPHP1	O15259	732 aa		18.67	■□□□□ 0.58
FOXP1-222	ENST00000615603	SOX12	O15370	315 aa		18.67	■□□□□ 0.58
FOXP1-222	ENST00000615603	FHAD1	B1AJZ9	1412 aa		18.66	■□□□□ 0.58
FOXP1-222	ENST00000615603	MYO15B	Q96JP2	1530 aa		18.66	■□□□□ 0.58
FOXP1-222	ENST00000615603	SAFB2	Q14151	953 aa	Known RBP eCLIP	18.65	■□□□□ 0.58
FOXP1-222	ENST00000615603	U2SURP	O15042	1029 aa	Known RBP	18.65	■□□□□ 0.58
FOXP1-222	ENST00000615603	FTSJ3	Q8IY81	847 aa	Known RBP	18.64	■□□□□ 0.57
FOXP1-222	ENST00000615603	CC2D1B	Q5T0F9	858 aa	Known RBP	18.64	■□□□□ 0.57
FOXP1-222	ENST00000615603	SRPK2	P78362	688 aa	Known RBP	18.62	■□□□□ 0.57
FOXP1-222	ENST00000615603	PDS5B	Q9NTI5	1447 aa		18.61	■□□□□ 0.57
FOXP1-222	ENST00000615603	TDRD9	Q8NDG6	1382 aa	Known RBP	18.61	■□□□□ 0.57
FOXP1-222	ENST00000615603	SOGA1	O94964	1423 aa		18.59	■□□□□ 0.57
FOXP1-222	ENST00000615603	CARMIL2	Q6F5E8	1435 aa		18.59	■□□□□ 0.57
FOXP1-222	ENST00000615603	NBR1	Q14596	966 aa		18.58	■□□□□ 0.56
FOXP1-222	ENST00000615603	TMF1	P82094	1093 aa		18.57	■□□□□ 0.56
FOXP1-222	ENST00000615603	STK26	Q9P289	416 aa		18.57	■□□□□ 0.56
FOXP1-222	ENST00000615603	FRAT1	Q92837	279 aa	Predicted RBP	18.55	■□□□□ 0.56
FOXP1-222	ENST00000615603	CDK11B	P21127	795 aa	Known RBP	18.54	■□□□□ 0.56
FOXP1-222	ENST00000615603	EFCAB2	Q5VUJ9	269 aa		18.52	■□□□□ 0.56
FOXP1-222	ENST00000615603	PKD2	Q13563	968 aa		18.51	■□□□□ 0.55
FOXP1-222	ENST00000615603	BECN1	Q14457	450 aa		18.49	■□□□□ 0.55
FOXP1-222	ENST00000615603	CASC1	Q6TDU7	716 aa		18.49	■□□□□ 0.55
FOXP1-222	ENST00000615603	OS9	Q13438	667 aa	Predicted RBP	18.49	■□□□□ 0.55
FOXP1-222	ENST00000615603	NCL	P19338	710 aa	Known RBP	18.48	■□□□□ 0.55
FOXP1-222	ENST00000615603	MORC1	Q86VD1	984 aa		18.48	■□□□□ 0.55
FOXP1-222	ENST00000615603	PNN	Q9H307	717 aa	Known RBP	18.48	■□□□□ 0.55
FOXP1-222	ENST00000615603	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.47	■□□□□ 0.55
FOXP1-222	ENST00000615603	FOXD1	Q16676	465 aa		18.47	■□□□□ 0.55
FOXP1-222	ENST00000615603	PAK3	O75914	559 aa	Predicted RBP	18.46	■□□□□ 0.55
FOXP1-222	ENST00000615603	CCDC88B	A6NC98	1476 aa		18.46	■□□□□ 0.55
FOXP1-222	ENST00000615603	EIF5B	O60841	1220 aa	Known RBP	18.46	■□□□□ 0.55
FOXP1-222	ENST00000615603	TAOK2	Q9UL54	1235 aa		18.44	■□□□□ 0.54
FOXP1-222	ENST00000615603	KIF3B	O15066	747 aa		18.43	■□□□□ 0.54
FOXP1-222	ENST00000615603	MROH2B	Q7Z745	1585 aa		18.43	■□□□□ 0.54
FOXP1-222	ENST00000615603	SMARCA2	P51531	1590 aa		18.42	■□□□□ 0.54
FOXP1-222	ENST00000615603	ARHGAP35	Q9NRY4	1499 aa		18.42	■□□□□ 0.54
FOXP1-222	ENST00000615603	GOLGA2	Q08379	1002 aa		18.42	■□□□□ 0.54
FOXP1-222	ENST00000615603	TPRN	Q4KMQ1	711 aa		18.42	■□□□□ 0.54
FOXP1-222	ENST00000615603	KANK4	Q5T7N3	995 aa	Predicted RBP	18.42	■□□□□ 0.54
FOXP1-222	ENST00000615603	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.42	■□□□□ 0.54
FOXP1-222	ENST00000615603	RGS3	P49796	1198 aa		18.41	■□□□□ 0.54
FOXP1-222	ENST00000615603	TULP1	O00294	542 aa	Predicted RBP	18.41	■□□□□ 0.54
FOXP1-222	ENST00000615603	CSB-PGBD3	P0DP91	1061 aa		18.4	■□□□□ 0.54
FOXP1-222	ENST00000615603	GOLGA6L22	H0YM25	854 aa		18.4	■□□□□ 0.54
FOXP1-222	ENST00000615603	DDRGK1	Q96HY6	314 aa		18.4	■□□□□ 0.54
FOXP1-222	ENST00000615603	CHMP4B	Q9H444	224 aa	Known RBP	18.4	■□□□□ 0.54
FOXP1-222	ENST00000615603	NUP155	O75694	1391 aa		18.39	■□□□□ 0.53
FOXP1-222	ENST00000615603	RTF1	Q92541	710 aa	Known RBP	18.39	■□□□□ 0.53
FOXP1-222	ENST00000615603	ZRSR1	Q15695	479 aa	Known RBP	18.37	■□□□□ 0.53
FOXP1-222	ENST00000615603	MS4A1	P11836	297 aa		18.37	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms