RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
CDH4-203ENST00000614565 RGL3Q3MIN7 710 aa17.25■□□□□ 0.35
CDH4-203ENST00000614565 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
CDH4-203ENST00000614565 CSRNP3Q8WYN3 585 aa17.22■□□□□ 0.35
CDH4-203ENST00000614565 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.21■□□□□ 0.35
CDH4-203ENST00000614565 KLHL34Q8N239 644 aa17.18■□□□□ 0.34
CDH4-203ENST00000614565 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
CDH4-203ENST00000614565 POGKQ9P215 609 aa17.14■□□□□ 0.34
CDH4-203ENST00000614565 ANP32CO43423 234 aa17.14■□□□□ 0.33
CDH4-203ENST00000614565 GGT6Q6P531 493 aa17.13■□□□□ 0.33
CDH4-203ENST00000614565 RRP7BPQ9NSQ0 103 aa17.13■□□□□ 0.33
CDH4-203ENST00000614565 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
CDH4-203ENST00000614565 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
CDH4-203ENST00000614565 MTUS2Q5JR59 1369 aa17.1■□□□□ 0.33
CDH4-203ENST00000614565 WIZO95785 1651 aa17.1■□□□□ 0.33
CDH4-203ENST00000614565 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
CDH4-203ENST00000614565 SAFB2Q14151 953 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDH4-203ENST00000614565 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
CDH4-203ENST00000614565 MSH5O43196 834 aa17.06■□□□□ 0.32
CDH4-203ENST00000614565 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
CDH4-203ENST00000614565 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
CDH4-203ENST00000614565 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
CDH4-203ENST00000614565 ZNF330Q9Y3S2 320 aaPredicted RBP17.04■□□□□ 0.32
CDH4-203ENST00000614565 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
CDH4-203ENST00000614565 CFDP1Q9UEE9 299 aaPredicted RBP17.01■□□□□ 0.31
CDH4-203ENST00000614565 STK26Q9P289 416 aa16.99■□□□□ 0.31
CDH4-203ENST00000614565 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
CDH4-203ENST00000614565 LAS1LQ9Y4W2 734 aaKnown RBP16.97■□□□□ 0.31
CDH4-203ENST00000614565 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
CDH4-203ENST00000614565 ISY1Q9ULR0 285 aaKnown RBP16.95■□□□□ 0.3
CDH4-203ENST00000614565 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
CDH4-203ENST00000614565 WDR43Q15061 677 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDH4-203ENST00000614565 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
CDH4-203ENST00000614565 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
CDH4-203ENST00000614565 HDGFP51858 240 aaKnown RBP16.91■□□□□ 0.3
CDH4-203ENST00000614565 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
CDH4-203ENST00000614565 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
CDH4-203ENST00000614565 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
CDH4-203ENST00000614565 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
CDH4-203ENST00000614565 SOGA1O94964 1423 aa16.88■□□□□ 0.29
CDH4-203ENST00000614565 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
CDH4-203ENST00000614565 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
CDH4-203ENST00000614565 TMX4Q9H1E5 349 aaPredicted RBP16.87■□□□□ 0.29
CDH4-203ENST00000614565 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
CDH4-203ENST00000614565 HSP90AA1P07900 732 aaKnown RBP16.83■□□□□ 0.29
CDH4-203ENST00000614565 HIRIP3Q9BW71 556 aaPredicted RBP16.83■□□□□ 0.29
CDH4-203ENST00000614565 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
CDH4-203ENST00000614565 G3V3G9 751 aa16.82■□□□□ 0.28
CDH4-203ENST00000614565 DCAF8Q5TAQ9 597 aa16.82■□□□□ 0.28
CDH4-203ENST00000614565 PIP4K2BP78356 416 aa16.82■□□□□ 0.28
CDH4-203ENST00000614565 PPP1R1BQ9UD71 204 aaPredicted RBP16.82■□□□□ 0.28
CDH4-203ENST00000614565 SRPK2P78362 688 aaKnown RBP16.82■□□□□ 0.28
CDH4-203ENST00000614565 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
CDH4-203ENST00000614565 NEUROD2Q15784 382 aa16.79■□□□□ 0.28
CDH4-203ENST00000614565 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
CDH4-203ENST00000614565 FAM69CQ0P6D2 419 aa16.79■□□□□ 0.28
CDH4-203ENST00000614565 SMARCA4P51532 1647 aa16.79■□□□□ 0.28
CDH4-203ENST00000614565 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
CDH4-203ENST00000614565 EVA1CP58658 441 aa16.77■□□□□ 0.28
CDH4-203ENST00000614565 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
CDH4-203ENST00000614565 CLSTN1O94985 981 aa16.76■□□□□ 0.27
CDH4-203ENST00000614565 EEA1Q15075 1411 aa16.75■□□□□ 0.27
CDH4-203ENST00000614565 MYH16Q9H6N6 1097 aa16.74■□□□□ 0.27
CDH4-203ENST00000614565 KANK1Q14678 1352 aa16.74■□□□□ 0.27
CDH4-203ENST00000614565 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
CDH4-203ENST00000614565 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
CDH4-203ENST00000614565 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
CDH4-203ENST00000614565 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.27
CDH4-203ENST00000614565 GTF3C3Q9Y5Q9 886 aa16.71■□□□□ 0.27
CDH4-203ENST00000614565 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
CDH4-203ENST00000614565 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
CDH4-203ENST00000614565 NUTM2BA6NNL0 878 aaPredicted RBP16.67■□□□□ 0.26
CDH4-203ENST00000614565 NUTM2EB1AL46 878 aaPredicted RBP16.67■□□□□ 0.26
CDH4-203ENST00000614565 SF3B2Q13435 895 aaKnown RBP16.67■□□□□ 0.26
CDH4-203ENST00000614565 NUTM2AQ8IVF1 878 aaPredicted RBP16.67■□□□□ 0.26
CDH4-203ENST00000614565 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
CDH4-203ENST00000614565 OS9Q13438 667 aaPredicted RBP16.66■□□□□ 0.26
CDH4-203ENST00000614565 SYTL4Q96C24 671 aaPredicted RBP16.66■□□□□ 0.26
CDH4-203ENST00000614565 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
CDH4-203ENST00000614565 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.26
CDH4-203ENST00000614565 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
CDH4-203ENST00000614565 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
CDH4-203ENST00000614565 NGDNQ8NEJ9 315 aaKnown RBP16.63■□□□□ 0.25
CDH4-203ENST00000614565 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
CDH4-203ENST00000614565 CLIP1P30622 1438 aa16.62■□□□□ 0.25
CDH4-203ENST00000614565 KIF3BO15066 747 aa16.61■□□□□ 0.25
CDH4-203ENST00000614565 NAP1L2Q9ULW6 460 aaPredicted RBP16.61■□□□□ 0.25
CDH4-203ENST00000614565 MAPK8IP3Q9UPT6 1336 aa16.6■□□□□ 0.25
CDH4-203ENST00000614565 CCNB3Q8WWL7 1395 aa16.59■□□□□ 0.25
CDH4-203ENST00000614565 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
CDH4-203ENST00000614565 KNSTRNQ9Y448 316 aa16.59■□□□□ 0.25
CDH4-203ENST00000614565 EIF4G2P78344 907 aaKnown RBP eCLIP16.58■□□□□ 0.25
CDH4-203ENST00000614565 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
CDH4-203ENST00000614565 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
CDH4-203ENST00000614565 ACIN1Q9UKV3 1341 aaKnown RBP16.55■□□□□ 0.24
CDH4-203ENST00000614565 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
CDH4-203ENST00000614565 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
CDH4-203ENST00000614565 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDH4-203ENST00000614565 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
CDH4-203ENST00000614565 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms