RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 DCAF8Q5TAQ9 597 aa14.67□□□□□ -0.06
SCAMP1-205ENST00000614488 CCDC61Q9Y6R9 512 aa14.64□□□□□ -0.07
SCAMP1-205ENST00000614488 ZNF579Q8NAF0 562 aaKnown RBP14.63□□□□□ -0.07
SCAMP1-205ENST00000614488 CIZ1Q9ULV3 898 aaPredicted RBP14.63□□□□□ -0.07
SCAMP1-205ENST00000614488 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
SCAMP1-205ENST00000614488 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
SCAMP1-205ENST00000614488 CLCN6P51797 869 aa14.53□□□□□ -0.08
SCAMP1-205ENST00000614488 PHF12Q96QT6 1004 aa14.53□□□□□ -0.08
SCAMP1-205ENST00000614488 CHRM1P11229 460 aaPredicted RBP14.51□□□□□ -0.09
SCAMP1-205ENST00000614488 PKD2Q13563 968 aa14.51□□□□□ -0.09
SCAMP1-205ENST00000614488 KIF12Q96FN5 646 aa14.49□□□□□ -0.09
SCAMP1-205ENST00000614488 PYGBP11216 843 aa14.48□□□□□ -0.09
SCAMP1-205ENST00000614488 SGIP1Q9BQI5 828 aa14.46□□□□□ -0.09
SCAMP1-205ENST00000614488 ECM2O94769 699 aaPredicted RBP14.44□□□□□ -0.1
SCAMP1-205ENST00000614488 RTN4Q9NQC3 1192 aaKnown RBP14.43□□□□□ -0.1
SCAMP1-205ENST00000614488 MAP3K13O43283 966 aa14.42□□□□□ -0.1
SCAMP1-205ENST00000614488 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
SCAMP1-205ENST00000614488 GABBR2O75899 941 aa14.39□□□□□ -0.11
SCAMP1-205ENST00000614488 MS4A3Q96HJ5 214 aa14.37□□□□□ -0.11
SCAMP1-205ENST00000614488 ZNF467Q7Z7K2 595 aaPredicted RBP14.36□□□□□ -0.11
SCAMP1-205ENST00000614488 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
SCAMP1-205ENST00000614488 IFNL1Q8IU54 200 aa14.33□□□□□ -0.12
SCAMP1-205ENST00000614488 RNF25Q96BH1 459 aaPredicted RBP14.31□□□□□ -0.12
SCAMP1-205ENST00000614488 RIOK3O14730 519 aaKnown RBP14.29□□□□□ -0.12
SCAMP1-205ENST00000614488 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
SCAMP1-205ENST00000614488 RGL2O15211 777 aa14.28□□□□□ -0.12
SCAMP1-205ENST00000614488 TAOK2Q9UL54 1235 aa14.24□□□□□ -0.13
SCAMP1-205ENST00000614488 TIE1P35590 1138 aa14.23□□□□□ -0.13
SCAMP1-205ENST00000614488 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
SCAMP1-205ENST00000614488 PDAP1Q13442 181 aaKnown RBP14.22□□□□□ -0.13
SCAMP1-205ENST00000614488 TRPC6Q9Y210 931 aa14.21□□□□□ -0.13
SCAMP1-205ENST00000614488 PSEN1P49768 467 aa14.17□□□□□ -0.14
SCAMP1-205ENST00000614488 DCBLD2Q96PD2 775 aa14.17□□□□□ -0.14
SCAMP1-205ENST00000614488 BMP2KQ9NSY1 1161 aaPredicted RBP14.16□□□□□ -0.14
SCAMP1-205ENST00000614488 ASTLQ6HA08 431 aaPredicted RBP14.14□□□□□ -0.15
SCAMP1-205ENST00000614488 TTLL13PA6NNM8 815 aa14.13□□□□□ -0.15
SCAMP1-205ENST00000614488 TMEM106CQ9BVX2 250 aa14.13□□□□□ -0.15
SCAMP1-205ENST00000614488 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.11□□□□□ -0.15
SCAMP1-205ENST00000614488 ATMINO43313 823 aaPredicted RBP14.11□□□□□ -0.15
SCAMP1-205ENST00000614488 ZFP91Q96JP5 570 aaPredicted RBP14.11□□□□□ -0.15
SCAMP1-205ENST00000614488 POTEIP0CG38 1075 aa14.08□□□□□ -0.16
SCAMP1-205ENST00000614488 DCAF8L2P0C7V8 631 aa14.07□□□□□ -0.16
SCAMP1-205ENST00000614488 ATN1P54259 1190 aaPredicted RBP14.06□□□□□ -0.16
SCAMP1-205ENST00000614488 STK25O00506 426 aa14.04□□□□□ -0.16
SCAMP1-205ENST00000614488 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
SCAMP1-205ENST00000614488 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
SCAMP1-205ENST00000614488 TRIM35Q9UPQ4 493 aa14.03□□□□□ -0.16
SCAMP1-205ENST00000614488 STK24Q9Y6E0 443 aa14□□□□□ -0.17
SCAMP1-205ENST00000614488 CHGAP10645 457 aaKnown RBP13.99□□□□□ -0.17
SCAMP1-205ENST00000614488 CABP2Q9NPB3 220 aa13.99□□□□□ -0.17
SCAMP1-205ENST00000614488 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
SCAMP1-205ENST00000614488 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
SCAMP1-205ENST00000614488 IER5LQ5T953 404 aa13.96□□□□□ -0.17
SCAMP1-205ENST00000614488 SLC39A7Q92504 469 aa13.96□□□□□ -0.17
SCAMP1-205ENST00000614488 DNAJC5Q9H3Z4 198 aa13.95□□□□□ -0.18
SCAMP1-205ENST00000614488 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
SCAMP1-205ENST00000614488 C7P10643 843 aa13.92□□□□□ -0.18
SCAMP1-205ENST00000614488 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.18
SCAMP1-205ENST00000614488 LHX8Q68G74 356 aa13.89□□□□□ -0.19
SCAMP1-205ENST00000614488 METRNQ9UJH8 293 aa13.89□□□□□ -0.19
SCAMP1-205ENST00000614488 SOX12O15370 315 aa13.87□□□□□ -0.19
SCAMP1-205ENST00000614488 IRX5P78411 483 aaPredicted RBP13.85□□□□□ -0.19
SCAMP1-205ENST00000614488 ILDR1Q86SU0 546 aaPredicted RBP13.83□□□□□ -0.2
SCAMP1-205ENST00000614488 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
SCAMP1-205ENST00000614488 OCEL1Q9H607 264 aa13.81□□□□□ -0.2
SCAMP1-205ENST00000614488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.25e-8■□□□□ 9.7
SCAMP1-205ENST00000614488 SEC24BO95487 1268 aa13.8□□□□□ -0.2
SCAMP1-205ENST00000614488 PLCG2P16885 1265 aa13.8□□□□□ -0.2
SCAMP1-205ENST00000614488 NLRP6P59044 892 aa13.79□□□□□ -0.2
SCAMP1-205ENST00000614488 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
SCAMP1-205ENST00000614488 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
SCAMP1-205ENST00000614488 POTEFA5A3E0 1075 aa13.78□□□□□ -0.2
SCAMP1-205ENST00000614488 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
SCAMP1-205ENST00000614488 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
SCAMP1-205ENST00000614488 PDCD7Q8N8D1 485 aaKnown RBP13.77□□□□□ -0.21
SCAMP1-205ENST00000614488 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
SCAMP1-205ENST00000614488 RYDENQ9NUL5 291 aaKnown RBP13.75□□□□□ -0.21
SCAMP1-205ENST00000614488 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.72□□□□□ -0.21
SCAMP1-205ENST00000614488 MS4A4AQ96JQ5 239 aa13.71□□□□□ -0.21
SCAMP1-205ENST00000614488 GTPBP6O43824 516 aaPredicted RBP13.66□□□□□ -0.22
SCAMP1-205ENST00000614488 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
SCAMP1-205ENST00000614488 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
SCAMP1-205ENST00000614488 POTEB2H3BUK9 544 aa13.62□□□□□ -0.23
SCAMP1-205ENST00000614488 SPRYD3Q8NCJ5 442 aa13.61□□□□□ -0.23
SCAMP1-205ENST00000614488 BOLA1Q9Y3E2 137 aa13.59□□□□□ -0.23
SCAMP1-205ENST00000614488 G3V3G9 751 aa13.58□□□□□ -0.24
SCAMP1-205ENST00000614488 PAXIP1Q6ZW49 1069 aaPredicted RBP13.57□□□□□ -0.24
SCAMP1-205ENST00000614488 PPP1R37O75864 691 aa13.56□□□□□ -0.24
SCAMP1-205ENST00000614488 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
SCAMP1-205ENST00000614488 TMEM121BQ9BXQ6 578 aaPredicted RBP13.56□□□□□ -0.24
SCAMP1-205ENST00000614488 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
SCAMP1-205ENST00000614488 MICALL2Q8IY33 904 aa13.55□□□□□ -0.24
SCAMP1-205ENST00000614488 CFAP44Q96MT7 982 aa13.54□□□□□ -0.24
SCAMP1-205ENST00000614488 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
SCAMP1-205ENST00000614488 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
SCAMP1-205ENST00000614488 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
SCAMP1-205ENST00000614488 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
SCAMP1-205ENST00000614488 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
SCAMP1-205ENST00000614488 SLAIN1Q8ND83 568 aa13.35□□□□□ -0.27
SCAMP1-205ENST00000614488 TMEM92Q6UXU6 159 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms