RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CSRNP3Q8WYN3 585 aa5.37□□□□□ -1.55
CBWD3-209ENST00000614377 NPM1P06748 294 aaKnown RBP eCLIP5.35□□□□□ -1.55
CBWD3-209ENST00000614377 MS4A3Q96HJ5 214 aa5.35□□□□□ -1.55
CBWD3-209ENST00000614377 EHMT2Q96KQ7 1210 aa5.35□□□□□ -1.55
CBWD3-209ENST00000614377 METRNQ9UJH8 293 aa5.35□□□□□ -1.55
CBWD3-209ENST00000614377 MNX1P50219 401 aaPredicted RBP5.32□□□□□ -1.56
CBWD3-209ENST00000614377 TSPYL2Q9H2G4 693 aaPredicted RBP5.31□□□□□ -1.56
CBWD3-209ENST00000614377 POTEJP0CG39 1038 aa5.31□□□□□ -1.56
CBWD3-209ENST00000614377 ATMINO43313 823 aaPredicted RBP5.31□□□□□ -1.56
CBWD3-209ENST00000614377 AMER1Q5JTC6 1135 aaPredicted RBP5.3□□□□□ -1.56
CBWD3-209ENST00000614377 ASTLQ6HA08 431 aaPredicted RBP5.3□□□□□ -1.56
CBWD3-209ENST00000614377 SLC39A7Q92504 469 aa5.3□□□□□ -1.56
CBWD3-209ENST00000614377 ERICH6Q7L0X2 663 aa5.3□□□□□ -1.56
CBWD3-209ENST00000614377 FAM163AQ96GL9 167 aaPredicted RBP5.3□□□□□ -1.56
CBWD3-209ENST00000614377 C7P10643 843 aa5.29□□□□□ -1.56
CBWD3-209ENST00000614377 ATN1P54259 1190 aaPredicted RBP5.27□□□□□ -1.57
CBWD3-209ENST00000614377 MAMSTRQ6ZN01 415 aa5.27□□□□□ -1.57
CBWD3-209ENST00000614377 SCUBE2Q9NQ36 999 aa5.27□□□□□ -1.57
CBWD3-209ENST00000614377 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
CBWD3-209ENST00000614377 RTN4Q9NQC3 1192 aaKnown RBP5.25□□□□□ -1.57
CBWD3-209ENST00000614377 TRPC6Q9Y210 931 aa5.24□□□□□ -1.57
CBWD3-209ENST00000614377 CCDC61Q9Y6R9 512 aa5.23□□□□□ -1.57
CBWD3-209ENST00000614377 ARXQ96QS3 562 aa5.23□□□□□ -1.57
CBWD3-209ENST00000614377 BMP2KQ9NSY1 1161 aaPredicted RBP5.22□□□□□ -1.57
CBWD3-209ENST00000614377 KIF12Q96FN5 646 aa5.22□□□□□ -1.57
CBWD3-209ENST00000614377 POTEFA5A3E0 1075 aa5.21□□□□□ -1.58
CBWD3-209ENST00000614377 MAP3K13O43283 966 aa5.2□□□□□ -1.58
CBWD3-209ENST00000614377 SEC24BO95487 1268 aa5.2□□□□□ -1.58
CBWD3-209ENST00000614377 COLQQ9Y215 455 aaPredicted RBP5.19□□□□□ -1.58
CBWD3-209ENST00000614377 RASEFQ8IZ41 740 aa5.18□□□□□ -1.58
CBWD3-209ENST00000614377 MIER1Q8N108 512 aa5.17□□□□□ -1.58
CBWD3-209ENST00000614377 TTLL13PA6NNM8 815 aa5.16□□□□□ -1.58
CBWD3-209ENST00000614377 PLEKHG5O94827 1062 aa5.16□□□□□ -1.58
CBWD3-209ENST00000614377 TIE1P35590 1138 aa5.16□□□□□ -1.58
CBWD3-209ENST00000614377 CDAN1Q8IWY9 1227 aa5.16□□□□□ -1.58
CBWD3-209ENST00000614377 TRIM35Q9UPQ4 493 aa5.15□□□□□ -1.58
CBWD3-209ENST00000614377 SLAIN1Q8ND83 568 aa5.13□□□□□ -1.59
CBWD3-209ENST00000614377 PCDHB13Q9Y5F0 798 aa5.13□□□□□ -1.59
CBWD3-209ENST00000614377 PROM2Q8N271 834 aa5.13□□□□□ -1.59
CBWD3-209ENST00000614377 PLCD3Q8N3E9 789 aa5.12□□□□□ -1.59
CBWD3-209ENST00000614377 ST18O60284 1047 aa5.1□□□□□ -1.59
CBWD3-209ENST00000614377 PLCG2P16885 1265 aa5.09□□□□□ -1.59
CBWD3-209ENST00000614377 RANGAP1P46060 587 aaPredicted RBP5.09□□□□□ -1.59
CBWD3-209ENST00000614377 IER5LQ5T953 404 aa5.09□□□□□ -1.6
CBWD3-209ENST00000614377 IFNL1Q8IU54 200 aa5.09□□□□□ -1.6
CBWD3-209ENST00000614377 TMEM106CQ9BVX2 250 aa5.09□□□□□ -1.6
CBWD3-209ENST00000614377 MARVELD3Q96A59 401 aa5.06□□□□□ -1.6
CBWD3-209ENST00000614377 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
CBWD3-209ENST00000614377 SGIP1Q9BQI5 828 aa5.05□□□□□ -1.6
CBWD3-209ENST00000614377 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
CBWD3-209ENST00000614377 FAM212AQ96EL1 285 aa5.04□□□□□ -1.6
CBWD3-209ENST00000614377 BCL11AQ9H165 835 aa5.04□□□□□ -1.6
CBWD3-209ENST00000614377 NUBP1P53384 320 aa5.04□□□□□ -1.6
CBWD3-209ENST00000614377 MMRN1Q13201 1228 aa5.04□□□□□ -1.6
CBWD3-209ENST00000614377 SPNS2Q8IVW8 549 aa5.03□□□□□ -1.6
CBWD3-209ENST00000614377 ZBTB47Q9UFB7 747 aaPredicted RBP5.03□□□□□ -1.6
CBWD3-209ENST00000614377 IRX5P78411 483 aaPredicted RBP5.02□□□□□ -1.61
CBWD3-209ENST00000614377 HOMEZQ8IX15 550 aa5.02□□□□□ -1.61
CBWD3-209ENST00000614377 PYGBP11216 843 aa5.01□□□□□ -1.61
CBWD3-209ENST00000614377 OCEL1Q9H607 264 aa5.01□□□□□ -1.61
CBWD3-209ENST00000614377 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.01□□□□□ -1.61
CBWD3-209ENST00000614377 TMEM121BQ9BXQ6 578 aaPredicted RBP5□□□□□ -1.61
CBWD3-209ENST00000614377 PCDHB8Q9UN66 801 aa5□□□□□ -1.61
CBWD3-209ENST00000614377 DCAF8Q5TAQ9 597 aa4.99□□□□□ -1.61
CBWD3-209ENST00000614377 SNPHO15079 494 aa4.99□□□□□ -1.61
CBWD3-209ENST00000614377 EIF5BO60841 1220 aaKnown RBP4.98□□□□□ -1.61
CBWD3-209ENST00000614377 EMP3P54852 163 aa4.98□□□□□ -1.61
CBWD3-209ENST00000614377 FAM9AQ8IZU1 332 aaPredicted RBP4.98□□□□□ -1.61
CBWD3-209ENST00000614377 TIMELESSQ9UNS1 1208 aa4.98□□□□□ -1.61
CBWD3-209ENST00000614377 C3orf67Q6ZVT6 689 aa4.97□□□□□ -1.61
CBWD3-209ENST00000614377 BCANQ96GW7 911 aa4.97□□□□□ -1.61
CBWD3-209ENST00000614377 TAOK2Q9UL54 1235 aa4.96□□□□□ -1.62
CBWD3-209ENST00000614377 FAM205CA6NFA0 338 aa4.95□□□□□ -1.62
CBWD3-209ENST00000614377 GOLGA2Q08379 1002 aa4.95□□□□□ -1.62
CBWD3-209ENST00000614377 PDCD7Q8N8D1 485 aaKnown RBP4.93□□□□□ -1.62
CBWD3-209ENST00000614377 HS3ST6Q96QI5 342 aa4.93□□□□□ -1.62
CBWD3-209ENST00000614377 MKRN3Q13064 507 aaKnown RBP4.92□□□□□ -1.62
CBWD3-209ENST00000614377 FKBP8Q14318 412 aa4.92□□□□□ -1.62
CBWD3-209ENST00000614377 POTEB3A0JP26 581 aa4.92□□□□□ -1.62
CBWD3-209ENST00000614377 XP32Q5T750 250 aa4.92□□□□□ -1.62
CBWD3-209ENST00000614377 POTEBQ6S5H4 581 aa4.92□□□□□ -1.62
CBWD3-209ENST00000614377 KRTAP3-3Q9BYR6 98 aa4.92□□□□□ -1.62
CBWD3-209ENST00000614377 KRTAP3-2Q9BYR7 98 aa4.92□□□□□ -1.62
CBWD3-209ENST00000614377 TULP1O00294 542 aaPredicted RBP4.91□□□□□ -1.62
CBWD3-209ENST00000614377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.91□□□□□ -1.62
CBWD3-209ENST00000614377 L3MBTL3Q96JM7 780 aaPredicted RBP4.9□□□□□ -1.62
CBWD3-209ENST00000614377 KLHL34Q8N239 644 aa4.89□□□□□ -1.63
CBWD3-209ENST00000614377 ZNF467Q7Z7K2 595 aaPredicted RBP4.88□□□□□ -1.63
CBWD3-209ENST00000614377 PSEN1P49768 467 aa4.87□□□□□ -1.63
CBWD3-209ENST00000614377 DPY19L2Q6NUT2 758 aa4.87□□□□□ -1.63
CBWD3-209ENST00000614377 G3V3G9 751 aa4.86□□□□□ -1.63
CBWD3-209ENST00000614377 GSE1Q14687 1217 aa4.85□□□□□ -1.63
CBWD3-209ENST00000614377 ZNF710Q8N1W2 664 aa4.85□□□□□ -1.63
CBWD3-209ENST00000614377 CABP2Q9NPB3 220 aa4.84□□□□□ -1.63
CBWD3-209ENST00000614377 ERBB3P21860 1342 aa4.83□□□□□ -1.64
CBWD3-209ENST00000614377 TPRNQ4KMQ1 711 aa4.83□□□□□ -1.64
CBWD3-209ENST00000614377 GTF3C3Q9Y5Q9 886 aa4.83□□□□□ -1.64
CBWD3-209ENST00000614377 FBXO3Q9UK99 471 aa4.83□□□□□ -1.64
CBWD3-209ENST00000614377 HOXB3P14651 431 aaPredicted RBP4.82□□□□□ -1.64
CBWD3-209ENST00000614377 RNF166Q96A37 237 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms