RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 NUBP1P53384 320 aa15.02■□□□□ -0
CCL3-205ENST00000613928 EIF4G1Q04637 1599 aaKnown RBP15.02□□□□□ -0.01
CCL3-205ENST00000613928 GSE1Q14687 1217 aa15.01□□□□□ -0.01
CCL3-205ENST00000613928 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
CCL3-205ENST00000613928 NPM1P06748 294 aaKnown RBP eCLIP14.99□□□□□ -0.01
CCL3-205ENST00000613928 FAM212AQ96EL1 285 aa14.95□□□□□ -0.02
CCL3-205ENST00000613928 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
CCL3-205ENST00000613928 DCAF8Q5TAQ9 597 aa14.92□□□□□ -0.02
CCL3-205ENST00000613928 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
CCL3-205ENST00000613928 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
CCL3-205ENST00000613928 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.02
CCL3-205ENST00000613928 RGL2O15211 777 aa14.88□□□□□ -0.03
CCL3-205ENST00000613928 PRKAR2AP13861 404 aaKnown RBP14.88□□□□□ -0.03
CCL3-205ENST00000613928 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
CCL3-205ENST00000613928 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
CCL3-205ENST00000613928 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
CCL3-205ENST00000613928 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
CCL3-205ENST00000613928 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
CCL3-205ENST00000613928 CHRM1P11229 460 aaPredicted RBP14.75□□□□□ -0.05
CCL3-205ENST00000613928 TAOK2Q9UL54 1235 aa14.72□□□□□ -0.05
CCL3-205ENST00000613928 PLCB2Q00722 1185 aa14.71□□□□□ -0.05
CCL3-205ENST00000613928 RNF25Q96BH1 459 aaPredicted RBP14.7□□□□□ -0.06
CCL3-205ENST00000613928 RIOK3O14730 519 aaKnown RBP14.69□□□□□ -0.06
CCL3-205ENST00000613928 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
CCL3-205ENST00000613928 TSPYL2Q9H2G4 693 aaPredicted RBP14.69□□□□□ -0.06
CCL3-205ENST00000613928 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.67□□□□□ -0.06
CCL3-205ENST00000613928 PYGBP11216 843 aa14.66□□□□□ -0.06
CCL3-205ENST00000613928 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
CCL3-205ENST00000613928 CHGAP10645 457 aaKnown RBP14.65□□□□□ -0.06
CCL3-205ENST00000613928 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
CCL3-205ENST00000613928 HS6ST3Q8IZP7 471 aa14.61□□□□□ -0.07
CCL3-205ENST00000613928 VGFO15240 615 aaPredicted RBP14.6□□□□□ -0.07
CCL3-205ENST00000613928 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
CCL3-205ENST00000613928 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
CCL3-205ENST00000613928 CUX2O14529 1486 aa14.55□□□□□ -0.08
CCL3-205ENST00000613928 ZNF467Q7Z7K2 595 aaPredicted RBP14.54□□□□□ -0.08
CCL3-205ENST00000613928 SGIP1Q9BQI5 828 aa14.53□□□□□ -0.08
CCL3-205ENST00000613928 STK25O00506 426 aa14.51□□□□□ -0.09
CCL3-205ENST00000613928 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
CCL3-205ENST00000613928 PAXIP1Q6ZW49 1069 aaPredicted RBP14.5□□□□□ -0.09
CCL3-205ENST00000613928 BAZ1AQ9NRL2 1556 aaPredicted RBP14.49□□□□□ -0.09
CCL3-205ENST00000613928 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
CCL3-205ENST00000613928 HAP1P54257 671 aaPredicted RBP14.48□□□□□ -0.09
CCL3-205ENST00000613928 SPRYD3Q8NCJ5 442 aa14.48□□□□□ -0.09
CCL3-205ENST00000613928 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.47□□□□□ -0.09
CCL3-205ENST00000613928 ZFP91Q96JP5 570 aaPredicted RBP14.47□□□□□ -0.09
CCL3-205ENST00000613928 CFAP44Q96MT7 982 aa14.47□□□□□ -0.09
CCL3-205ENST00000613928 ZRANB1Q9UGI0 708 aa14.45□□□□□ -0.1
CCL3-205ENST00000613928 ZNF579Q8NAF0 562 aaKnown RBP14.44□□□□□ -0.1
CCL3-205ENST00000613928 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
CCL3-205ENST00000613928 WIZO95785 1651 aa14.43□□□□□ -0.1
CCL3-205ENST00000613928 BCL11BQ9C0K0 894 aaPredicted RBP14.43□□□□□ -0.1
CCL3-205ENST00000613928 PCDHB13Q9Y5F0 798 aa14.42□□□□□ -0.1
CCL3-205ENST00000613928 STK24Q9Y6E0 443 aa14.42□□□□□ -0.1
CCL3-205ENST00000613928 PDAP1Q13442 181 aaKnown RBP14.41□□□□□ -0.1
CCL3-205ENST00000613928 KIF12Q96FN5 646 aa14.41□□□□□ -0.1
CCL3-205ENST00000613928 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
CCL3-205ENST00000613928 C19orf67A6NJJ6 358 aa14.38□□□□□ -0.11
CCL3-205ENST00000613928 MAP3K13O43283 966 aa14.37□□□□□ -0.11
CCL3-205ENST00000613928 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
CCL3-205ENST00000613928 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
CCL3-205ENST00000613928 NKX1-1Q15270 411 aaPredicted RBP14.34□□□□□ -0.11
CCL3-205ENST00000613928 PSEN1P49768 467 aa14.33□□□□□ -0.12
CCL3-205ENST00000613928 PHF12Q96QT6 1004 aa14.33□□□□□ -0.12
CCL3-205ENST00000613928 NESP48681 1621 aa14.33□□□□□ -0.12
CCL3-205ENST00000613928 RYDENQ9NUL5 291 aaKnown RBP14.32□□□□□ -0.12
CCL3-205ENST00000613928 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
CCL3-205ENST00000613928 VSIG10Q8N0Z9 540 aa14.3□□□□□ -0.12
CCL3-205ENST00000613928 TOP2AP11388 1531 aaKnown RBP14.27□□□□□ -0.12
CCL3-205ENST00000613928 HMGXB3Q12766 1538 aa14.27□□□□□ -0.12
CCL3-205ENST00000613928 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
CCL3-205ENST00000613928 GTPBP6O43824 516 aaPredicted RBP14.26□□□□□ -0.13
CCL3-205ENST00000613928 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
CCL3-205ENST00000613928 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
CCL3-205ENST00000613928 HAX1O00165 279 aa14.22□□□□□ -0.13
CCL3-205ENST00000613928 TSHZ2Q9NRE2 1034 aa14.2□□□□□ -0.14
CCL3-205ENST00000613928 KIF21AQ7Z4S6 1674 aa14.18□□□□□ -0.14
CCL3-205ENST00000613928 MS4A3Q96HJ5 214 aa14.18□□□□□ -0.14
CCL3-205ENST00000613928 BAZ1BQ9UIG0 1483 aaKnown RBP14.18□□□□□ -0.14
CCL3-205ENST00000613928 CLCN6P51797 869 aa14.16□□□□□ -0.14
CCL3-205ENST00000613928 CABP2Q9NPB3 220 aa14.15□□□□□ -0.14
CCL3-205ENST00000613928 CCDC88BA6NC98 1476 aa14.14□□□□□ -0.15
CCL3-205ENST00000613928 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
CCL3-205ENST00000613928 TMEM106CQ9BVX2 250 aa14.11□□□□□ -0.15
CCL3-205ENST00000613928 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
CCL3-205ENST00000613928 SOX12O15370 315 aa14.1□□□□□ -0.15
CCL3-205ENST00000613928 EFCAB3Q8N7B9 438 aa14.1□□□□□ -0.15
CCL3-205ENST00000613928 MFRPQ9BY79 579 aa14.09□□□□□ -0.15
CCL3-205ENST00000613928 TIE1P35590 1138 aa14.08□□□□□ -0.16
CCL3-205ENST00000613928 GOLGA2Q08379 1002 aa14.08□□□□□ -0.16
CCL3-205ENST00000613928 TRPC6Q9Y210 931 aa14.07□□□□□ -0.16
CCL3-205ENST00000613928 NLRP6P59044 892 aa14.06□□□□□ -0.16
CCL3-205ENST00000613928 EVX2Q03828 476 aa14.05□□□□□ -0.16
CCL3-205ENST00000613928 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
CCL3-205ENST00000613928 GALR2O43603 387 aaPredicted RBP14.02□□□□□ -0.17
CCL3-205ENST00000613928 POTEHQ6S545 545 aa14.01□□□□□ -0.17
CCL3-205ENST00000613928 FBXO22Q8NEZ5 403 aa14.01□□□□□ -0.17
CCL3-205ENST00000613928 PHF8Q9UPP1 1060 aa14.01□□□□□ -0.17
CCL3-205ENST00000613928 TTLL13PA6NNM8 815 aa14□□□□□ -0.17
CCL3-205ENST00000613928 MKRN3Q13064 507 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms