RNA–Protein interactions for RNA: ENST00000613886.4

RUNX1T1-249, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RUNX1T1, Length 7,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-249ENST00000613886 MYH16Q9H6N6 1097 aa10.89□□□□□ -0.67
RUNX1T1-249ENST00000613886 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
RUNX1T1-249ENST00000613886 RRP7BPQ9NSQ0 103 aa10.88□□□□□ -0.67
RUNX1T1-249ENST00000613886 SENP3-EIF4A1A0A087X0R7 540 aa10.87□□□□□ -0.67
RUNX1T1-249ENST00000613886 RGL3Q3MIN7 710 aa10.85□□□□□ -0.67
RUNX1T1-249ENST00000613886 HAP1P54257 671 aaPredicted RBP10.84□□□□□ -0.67
RUNX1T1-249ENST00000613886 ARID4BQ4LE39 1312 aaPredicted RBP10.83□□□□□ -0.68
RUNX1T1-249ENST00000613886 CDK11BP21127 795 aaKnown RBP10.83□□□□□ -0.68
RUNX1T1-249ENST00000613886 PPM1GO15355 546 aaPredicted RBP10.82□□□□□ -0.68
RUNX1T1-249ENST00000613886 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
RUNX1T1-249ENST00000613886 MIER1Q8N108 512 aa10.8□□□□□ -0.68
RUNX1T1-249ENST00000613886 TPRNQ4KMQ1 711 aa10.79□□□□□ -0.68
RUNX1T1-249ENST00000613886 TULP1O00294 542 aaPredicted RBP10.78□□□□□ -0.68
RUNX1T1-249ENST00000613886 DCAF1Q9Y4B6 1507 aa10.77□□□□□ -0.69
RUNX1T1-249ENST00000613886 LAS1LQ9Y4W2 734 aaKnown RBP10.76□□□□□ -0.69
RUNX1T1-249ENST00000613886 PLEKHD1A6NEE1 506 aa10.76□□□□□ -0.69
RUNX1T1-249ENST00000613886 CLIP1P30622 1438 aa10.75□□□□□ -0.69
RUNX1T1-249ENST00000613886 LMOD2Q6P5Q4 547 aa10.75□□□□□ -0.69
RUNX1T1-249ENST00000613886 NCLP19338 710 aaKnown RBP10.74□□□□□ -0.69
RUNX1T1-249ENST00000613886 TAOK2Q9UL54 1235 aa10.74□□□□□ -0.69
RUNX1T1-249ENST00000613886 NEUROD2Q15784 382 aa10.74□□□□□ -0.69
RUNX1T1-249ENST00000613886 ZCCHC6Q5VYS8 1495 aaKnown RBP10.73□□□□□ -0.69
RUNX1T1-249ENST00000613886 CFAP53Q96M91 514 aa10.73□□□□□ -0.69
RUNX1T1-249ENST00000613886 BECN1Q14457 450 aa10.72□□□□□ -0.69
RUNX1T1-249ENST00000613886 GLIPR1L2Q4G1C9 344 aa10.72□□□□□ -0.69
RUNX1T1-249ENST00000613886 KNSTRNQ9Y448 316 aa10.72□□□□□ -0.69
RUNX1T1-249ENST00000613886 FTSJ3Q8IY81 847 aaKnown RBP10.71□□□□□ -0.69
RUNX1T1-249ENST00000613886 TNNT2P45379 298 aaPredicted RBP10.71□□□□□ -0.7
RUNX1T1-249ENST00000613886 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
RUNX1T1-249ENST00000613886 NPHP1O15259 732 aa10.7□□□□□ -0.7
RUNX1T1-249ENST00000613886 CFDP1Q9UEE9 299 aaPredicted RBP10.69□□□□□ -0.7
RUNX1T1-249ENST00000613886 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
RUNX1T1-249ENST00000613886 TRIM44Q96DX7 344 aaPredicted RBP10.69□□□□□ -0.7
RUNX1T1-249ENST00000613886 CARD11Q9BXL7 1154 aa10.69□□□□□ -0.7
RUNX1T1-249ENST00000613886 POGKQ9P215 609 aa10.68□□□□□ -0.7
RUNX1T1-249ENST00000613886 CASC1Q6TDU7 716 aa10.68□□□□□ -0.7
RUNX1T1-249ENST00000613886 ZRSR1Q15695 479 aaKnown RBP10.67□□□□□ -0.7
RUNX1T1-249ENST00000613886 GOLGA6L22H0YM25 854 aa10.67□□□□□ -0.7
RUNX1T1-249ENST00000613886 MAPK8IP3Q9UPT6 1336 aa10.66□□□□□ -0.7
RUNX1T1-249ENST00000613886 CDCA8Q53HL2 280 aa10.66□□□□□ -0.7
RUNX1T1-249ENST00000613886 SUPT16HQ9Y5B9 1047 aaKnown RBP10.66□□□□□ -0.7
RUNX1T1-249ENST00000613886 CC2D1BQ5T0F9 858 aaKnown RBP10.65□□□□□ -0.7
RUNX1T1-249ENST00000613886 PTMAP06454 111 aaKnown RBP10.65□□□□□ -0.71
RUNX1T1-249ENST00000613886 FRAT1Q92837 279 aaPredicted RBP10.65□□□□□ -0.71
RUNX1T1-249ENST00000613886 GOLGA3Q08378 1498 aa10.64□□□□□ -0.71
RUNX1T1-249ENST00000613886 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
RUNX1T1-249ENST00000613886 SOX12O15370 315 aa10.63□□□□□ -0.71
RUNX1T1-249ENST00000613886 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
RUNX1T1-249ENST00000613886 CEP162Q5TB80 1403 aa10.63□□□□□ -0.71
RUNX1T1-249ENST00000613886 RGS3P49796 1198 aa10.62□□□□□ -0.71
RUNX1T1-249ENST00000613886 NUDCQ9Y266 331 aa10.62□□□□□ -0.71
RUNX1T1-249ENST00000613886 MLECQ14165 292 aa10.61□□□□□ -0.71
RUNX1T1-249ENST00000613886 DNTTIP2Q5QJE6 756 aaKnown RBP10.61□□□□□ -0.71
RUNX1T1-249ENST00000613886 NAP1L2Q9ULW6 460 aaPredicted RBP10.61□□□□□ -0.71
RUNX1T1-249ENST00000613886 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
RUNX1T1-249ENST00000613886 RB1CC1Q8TDY2 1594 aa10.61□□□□□ -0.71
RUNX1T1-249ENST00000613886 TRHP20396 242 aaPredicted RBP10.6□□□□□ -0.71
RUNX1T1-249ENST00000613886 SIN3AQ96ST3 1273 aa10.6□□□□□ -0.71
RUNX1T1-249ENST00000613886 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
RUNX1T1-249ENST00000613886 FGD1P98174 961 aa10.59□□□□□ -0.71
RUNX1T1-249ENST00000613886 GOLGA2Q08379 1002 aa10.58□□□□□ -0.72
RUNX1T1-249ENST00000613886 ANP32EQ9BTT0 268 aa10.58□□□□□ -0.72
RUNX1T1-249ENST00000613886 KCNJ4P48050 445 aa10.57□□□□□ -0.72
RUNX1T1-249ENST00000613886 BAZ1BQ9UIG0 1483 aaKnown RBP10.57□□□□□ -0.72
RUNX1T1-249ENST00000613886 SAFB2Q14151 953 aaKnown RBP eCLIP10.57□□□□□ -0.72
RUNX1T1-249ENST00000613886 CCDC180Q9P1Z9 1646 aa10.57□□□□□ -0.72
RUNX1T1-249ENST00000613886 MYO15BQ96JP2 1530 aa10.56□□□□□ -0.72
RUNX1T1-249ENST00000613886 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
RUNX1T1-249ENST00000613886 HSP90AB1P08238 724 aaKnown RBP10.56□□□□□ -0.72
RUNX1T1-249ENST00000613886 KIF27Q86VH2 1401 aa10.55□□□□□ -0.72
RUNX1T1-249ENST00000613886 WRNQ14191 1432 aaPredicted RBP eCLIP10.55□□□□□ -0.72
RUNX1T1-249ENST00000613886 DCAF11Q8TEB1 546 aa10.55□□□□□ -0.72
RUNX1T1-249ENST00000613886 SRPK2P78362 688 aaKnown RBP10.54□□□□□ -0.72
RUNX1T1-249ENST00000613886 NCBP3Q53F19 620 aaKnown RBP10.52□□□□□ -0.72
RUNX1T1-249ENST00000613886 PNNQ9H307 717 aaKnown RBP10.52□□□□□ -0.73
RUNX1T1-249ENST00000613886 STK26Q9P289 416 aa10.52□□□□□ -0.73
RUNX1T1-249ENST00000613886 EEA1Q15075 1411 aa10.52□□□□□ -0.73
RUNX1T1-249ENST00000613886 TMF1P82094 1093 aa10.51□□□□□ -0.73
RUNX1T1-249ENST00000613886 CCNB3Q8WWL7 1395 aa10.51□□□□□ -0.73
RUNX1T1-249ENST00000613886 B4GALNT3Q6L9W6 998 aa10.51□□□□□ -0.73
RUNX1T1-249ENST00000613886 ISY1Q9ULR0 285 aaKnown RBP10.51□□□□□ -0.73
RUNX1T1-249ENST00000613886 KANK1Q14678 1352 aa10.5□□□□□ -0.73
RUNX1T1-249ENST00000613886 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
RUNX1T1-249ENST00000613886 SPRYD3Q8NCJ5 442 aa10.5□□□□□ -0.73
RUNX1T1-249ENST00000613886 CLSTN1O94985 981 aa10.5□□□□□ -0.73
RUNX1T1-249ENST00000613886 PPP4R2Q9NY27 417 aa10.49□□□□□ -0.73
RUNX1T1-249ENST00000613886 CEP164Q9UPV0 1460 aa10.49□□□□□ -0.73
RUNX1T1-249ENST00000613886 CHMP4BQ9H444 224 aaKnown RBP10.49□□□□□ -0.73
RUNX1T1-249ENST00000613886 NAP1L5Q96NT1 182 aaPredicted RBP10.49□□□□□ -0.73
RUNX1T1-249ENST00000613886 MORC1Q86VD1 984 aa10.49□□□□□ -0.73
RUNX1T1-249ENST00000613886 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
RUNX1T1-249ENST00000613886 MS4A1P11836 297 aa10.48□□□□□ -0.73
RUNX1T1-249ENST00000613886 GGT6Q6P531 493 aa10.48□□□□□ -0.73
RUNX1T1-249ENST00000613886 APBB1O00213 710 aa10.48□□□□□ -0.73
RUNX1T1-249ENST00000613886 RTF1Q92541 710 aaKnown RBP10.47□□□□□ -0.73
RUNX1T1-249ENST00000613886 GOLGA6L4A6NEF3 574 aa10.46□□□□□ -0.73
RUNX1T1-249ENST00000613886 GOLGA6L6A8MZA4 724 aa10.46□□□□□ -0.73
RUNX1T1-249ENST00000613886 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.73
RUNX1T1-249ENST00000613886 ZNF330Q9Y3S2 320 aaPredicted RBP10.46□□□□□ -0.74
RUNX1T1-249ENST00000613886 HSCBQ8IWL3 235 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 545.5 ms