RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 ATMINO43313 823 aaPredicted RBP9.9□□□□□ -0.82
LINC00649-216ENST00000613667 POTEJP0CG39 1038 aa9.9□□□□□ -0.82
LINC00649-216ENST00000613667 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
LINC00649-216ENST00000613667 SCUBE2Q9NQ36 999 aa9.88□□□□□ -0.83
LINC00649-216ENST00000613667 MS4A3Q96HJ5 214 aa9.87□□□□□ -0.83
LINC00649-216ENST00000613667 MNX1P50219 401 aaPredicted RBP9.86□□□□□ -0.83
LINC00649-216ENST00000613667 FAM163AQ96GL9 167 aaPredicted RBP9.86□□□□□ -0.83
LINC00649-216ENST00000613667 CSRNP3Q8WYN3 585 aa9.8□□□□□ -0.84
LINC00649-216ENST00000613667 SPDYE4A6NLX3 237 aa9.78□□□□□ -0.84
LINC00649-216ENST00000613667 ATN1P54259 1190 aaPredicted RBP9.76□□□□□ -0.85
LINC00649-216ENST00000613667 CDAN1Q8IWY9 1227 aa9.71□□□□□ -0.86
LINC00649-216ENST00000613667 POTEFA5A3E0 1075 aa9.69□□□□□ -0.86
LINC00649-216ENST00000613667 CCDC61Q9Y6R9 512 aa9.69□□□□□ -0.86
LINC00649-216ENST00000613667 TSPYL2Q9H2G4 693 aaPredicted RBP9.68□□□□□ -0.86
LINC00649-216ENST00000613667 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
LINC00649-216ENST00000613667 KIF12Q96FN5 646 aa9.66□□□□□ -0.86
LINC00649-216ENST00000613667 TIE1P35590 1138 aa9.65□□□□□ -0.86
LINC00649-216ENST00000613667 TRPC6Q9Y210 931 aa9.65□□□□□ -0.86
LINC00649-216ENST00000613667 SEC24BO95487 1268 aa9.61□□□□□ -0.87
LINC00649-216ENST00000613667 COLQQ9Y215 455 aaPredicted RBP9.57□□□□□ -0.88
LINC00649-216ENST00000613667 MAP3K13O43283 966 aa9.56□□□□□ -0.88
LINC00649-216ENST00000613667 IER5LQ5T953 404 aa9.56□□□□□ -0.88
LINC00649-216ENST00000613667 TTLL13PA6NNM8 815 aa9.55□□□□□ -0.88
LINC00649-216ENST00000613667 ST18O60284 1047 aa9.54□□□□□ -0.88
LINC00649-216ENST00000613667 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
LINC00649-216ENST00000613667 MMRN1Q13201 1228 aa9.51□□□□□ -0.89
LINC00649-216ENST00000613667 PROM2Q8N271 834 aa9.51□□□□□ -0.89
LINC00649-216ENST00000613667 RASEFQ8IZ41 740 aa9.49□□□□□ -0.89
LINC00649-216ENST00000613667 SGIP1Q9BQI5 828 aa9.49□□□□□ -0.89
LINC00649-216ENST00000613667 TRIM35Q9UPQ4 493 aa9.49□□□□□ -0.89
LINC00649-216ENST00000613667 PLEKHG5O94827 1062 aa9.48□□□□□ -0.89
LINC00649-216ENST00000613667 SPNS2Q8IVW8 549 aa9.48□□□□□ -0.89
LINC00649-216ENST00000613667 TMEM121BQ9BXQ6 578 aaPredicted RBP9.46□□□□□ -0.9
LINC00649-216ENST00000613667 EHMT2Q96KQ7 1210 aa9.43□□□□□ -0.9
LINC00649-216ENST00000613667 PCDHB13Q9Y5F0 798 aa9.41□□□□□ -0.9
LINC00649-216ENST00000613667 SNPHO15079 494 aa9.4□□□□□ -0.9
LINC00649-216ENST00000613667 PLCG2P16885 1265 aa9.4□□□□□ -0.9
LINC00649-216ENST00000613667 MIER1Q8N108 512 aa9.37□□□□□ -0.91
LINC00649-216ENST00000613667 IRX5P78411 483 aaPredicted RBP9.34□□□□□ -0.91
LINC00649-216ENST00000613667 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.91
LINC00649-216ENST00000613667 IFNL1Q8IU54 200 aa9.32□□□□□ -0.92
LINC00649-216ENST00000613667 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.31□□□□□ -0.92
LINC00649-216ENST00000613667 MARVELD3Q96A59 401 aa9.3□□□□□ -0.92
LINC00649-216ENST00000613667 OCEL1Q9H607 264 aa9.3□□□□□ -0.92
LINC00649-216ENST00000613667 NUBP1P53384 320 aa9.28□□□□□ -0.92
LINC00649-216ENST00000613667 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
LINC00649-216ENST00000613667 PLCD3Q8N3E9 789 aa9.24□□□□□ -0.93
LINC00649-216ENST00000613667 EMP3P54852 163 aa9.23□□□□□ -0.93
LINC00649-216ENST00000613667 FAM212AQ96EL1 285 aa9.23□□□□□ -0.93
LINC00649-216ENST00000613667 KRTAP3-3Q9BYR6 98 aa9.19□□□□□ -0.94
LINC00649-216ENST00000613667 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
LINC00649-216ENST00000613667 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
LINC00649-216ENST00000613667 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
LINC00649-216ENST00000613667 FAM205CA6NFA0 338 aa9.14□□□□□ -0.95
LINC00649-216ENST00000613667 POTEB3A0JP26 581 aa9.13□□□□□ -0.95
LINC00649-216ENST00000613667 POTEBQ6S5H4 581 aa9.13□□□□□ -0.95
LINC00649-216ENST00000613667 L3MBTL3Q96JM7 780 aaPredicted RBP9.13□□□□□ -0.95
LINC00649-216ENST00000613667 PYGBP11216 843 aa9.1□□□□□ -0.95
LINC00649-216ENST00000613667 PDCD7Q8N8D1 485 aaKnown RBP9.1□□□□□ -0.95
LINC00649-216ENST00000613667 PCDHB8Q9UN66 801 aa9.1□□□□□ -0.95
LINC00649-216ENST00000613667 MKRN3Q13064 507 aaKnown RBP9.05□□□□□ -0.96
LINC00649-216ENST00000613667 DCAF8Q5TAQ9 597 aa9.05□□□□□ -0.96
LINC00649-216ENST00000613667 GOLGA2Q08379 1002 aa9.04□□□□□ -0.96
LINC00649-216ENST00000613667 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
LINC00649-216ENST00000613667 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
LINC00649-216ENST00000613667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC00649-216ENST00000613667 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
LINC00649-216ENST00000613667 HOXB3P14651 431 aaPredicted RBP8.95□□□□□ -0.98
LINC00649-216ENST00000613667 ILDR1Q86SU0 546 aaPredicted RBP8.94□□□□□ -0.98
LINC00649-216ENST00000613667 ZNF710Q8N1W2 664 aa8.94□□□□□ -0.98
LINC00649-216ENST00000613667 ERBB3P21860 1342 aa8.94□□□□□ -0.98
LINC00649-216ENST00000613667 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
LINC00649-216ENST00000613667 DPY19L2Q6NUT2 758 aa8.92□□□□□ -0.98
LINC00649-216ENST00000613667 G3V3G9 751 aa8.91□□□□□ -0.98
LINC00649-216ENST00000613667 DOK7Q18PE1 504 aa8.91□□□□□ -0.98
LINC00649-216ENST00000613667 PTGER2P43116 358 aa8.89□□□□□ -0.99
LINC00649-216ENST00000613667 PSEN1P49768 467 aa8.89□□□□□ -0.99
LINC00649-216ENST00000613667 GSE1Q14687 1217 aa8.89□□□□□ -0.99
LINC00649-216ENST00000613667 BOLA1Q9Y3E2 137 aa8.89□□□□□ -0.99
LINC00649-216ENST00000613667 CHRM1P11229 460 aaPredicted RBP8.88□□□□□ -0.99
LINC00649-216ENST00000613667 FKBP8Q14318 412 aa8.88□□□□□ -0.99
LINC00649-216ENST00000613667 RIMBP2O15034 1052 aa8.87□□□□□ -0.99
LINC00649-216ENST00000613667 VARS2Q5ST30 1063 aaKnown RBP8.85□□□□□ -0.99
LINC00649-216ENST00000613667 ZNF687Q8N1G0 1237 aa8.84□□□□□ -0.99
LINC00649-216ENST00000613667 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
LINC00649-216ENST00000613667 ZSWIM6Q9HCJ5 1215 aa8.81□□□□□ -1
LINC00649-216ENST00000613667 CABP2Q9NPB3 220 aa8.78□□□□□ -1
LINC00649-216ENST00000613667 FBXO3Q9UK99 471 aa8.77□□□□□ -1.01
LINC00649-216ENST00000613667 KLHL34Q8N239 644 aa8.76□□□□□ -1.01
LINC00649-216ENST00000613667 VASPP50552 380 aaPredicted RBP8.73□□□□□ -1.01
LINC00649-216ENST00000613667 GPR153Q6NV75 609 aa8.72□□□□□ -1.01
LINC00649-216ENST00000613667 TMEM92Q6UXU6 159 aa8.71□□□□□ -1.02
LINC00649-216ENST00000613667 ANKRD13DQ6ZTN6 518 aa8.7□□□□□ -1.02
LINC00649-216ENST00000613667 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
LINC00649-216ENST00000613667 LSM11P83369 360 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC00649-216ENST00000613667 EFCAB3Q8N7B9 438 aa8.65□□□□□ -1.02
LINC00649-216ENST00000613667 MICALL2Q8IY33 904 aa8.63□□□□□ -1.03
LINC00649-216ENST00000613667 ZNF316A6NFI3 1004 aaPredicted RBP8.62□□□□□ -1.03
LINC00649-216ENST00000613667 HCSTQ9UBK5 93 aa8.61□□□□□ -1.03
LINC00649-216ENST00000613667 CIZ1Q9ULV3 898 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms