RNA–Protein interactions for RNA: ENST00000612968.1

ARHGEF12-214, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 2

Gene ARHGEF12, Length 1,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-214ENST00000612968 POTEB2H3BUK9 544 aa16.71■□□□□ 0.27
ARHGEF12-214ENST00000612968 MIER1Q8N108 512 aa16.69■□□□□ 0.26
ARHGEF12-214ENST00000612968 SLC39A7Q92504 469 aa16.69■□□□□ 0.26
ARHGEF12-214ENST00000612968 CCDC61Q9Y6R9 512 aa16.69■□□□□ 0.26
ARHGEF12-214ENST00000612968 ATMINO43313 823 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF12-214ENST00000612968 C7P10643 843 aa16.68■□□□□ 0.26
ARHGEF12-214ENST00000612968 METRNQ9UJH8 293 aa16.66■□□□□ 0.26
ARHGEF12-214ENST00000612968 KIF12Q96FN5 646 aa16.61■□□□□ 0.25
ARHGEF12-214ENST00000612968 MAMSTRQ6ZN01 415 aa16.56■□□□□ 0.24
ARHGEF12-214ENST00000612968 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
ARHGEF12-214ENST00000612968 ATN1P54259 1190 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF12-214ENST00000612968 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF12-214ENST00000612968 RASEFQ8IZ41 740 aa16.5■□□□□ 0.23
ARHGEF12-214ENST00000612968 MAP3K13O43283 966 aa16.49■□□□□ 0.23
ARHGEF12-214ENST00000612968 PLSCR2Q9NRY7 297 aa16.49■□□□□ 0.23
ARHGEF12-214ENST00000612968 TIE1P35590 1138 aa16.47■□□□□ 0.23
ARHGEF12-214ENST00000612968 BMP2KQ9NSY1 1161 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF12-214ENST00000612968 POTEMA6NI47 508 aa16.42■□□□□ 0.22
ARHGEF12-214ENST00000612968 SCUBE2Q9NQ36 999 aa16.42■□□□□ 0.22
ARHGEF12-214ENST00000612968 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
ARHGEF12-214ENST00000612968 SGIP1Q9BQI5 828 aa16.4■□□□□ 0.22
ARHGEF12-214ENST00000612968 TRPC6Q9Y210 931 aa16.38■□□□□ 0.21
ARHGEF12-214ENST00000612968 POTEGQ6S5H5 508 aa16.37■□□□□ 0.21
ARHGEF12-214ENST00000612968 TTLL13PA6NNM8 815 aa16.33■□□□□ 0.2
ARHGEF12-214ENST00000612968 PCDHB13Q9Y5F0 798 aa16.32■□□□□ 0.2
ARHGEF12-214ENST00000612968 SEC24BO95487 1268 aa16.31■□□□□ 0.2
ARHGEF12-214ENST00000612968 NUBP1P53384 320 aa16.31■□□□□ 0.2
ARHGEF12-214ENST00000612968 PCDH10Q9P2E7 1040 aa16.3■□□□□ 0.2
ARHGEF12-214ENST00000612968 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
ARHGEF12-214ENST00000612968 POTEFA5A3E0 1075 aa16.28■□□□□ 0.2
ARHGEF12-214ENST00000612968 FKBP8Q14318 412 aa16.28■□□□□ 0.2
ARHGEF12-214ENST00000612968 IER5LQ5T953 404 aa16.26■□□□□ 0.19
ARHGEF12-214ENST00000612968 TRIM35Q9UPQ4 493 aa16.24■□□□□ 0.19
ARHGEF12-214ENST00000612968 FAM163AQ96GL9 167 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF12-214ENST00000612968 COLQQ9Y215 455 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF12-214ENST00000612968 IFNL1Q8IU54 200 aa16.18■□□□□ 0.18
ARHGEF12-214ENST00000612968 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
ARHGEF12-214ENST00000612968 TMEM106CQ9BVX2 250 aa16.13■□□□□ 0.17
ARHGEF12-214ENST00000612968 LCE2DQ5TA82 110 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF12-214ENST00000612968 DCAF8Q5TAQ9 597 aa16.09■□□□□ 0.17
ARHGEF12-214ENST00000612968 PLCG2P16885 1265 aa16.05■□□□□ 0.16
ARHGEF12-214ENST00000612968 PYGBP11216 843 aa16■□□□□ 0.15
ARHGEF12-214ENST00000612968 SLAIN1Q8ND83 568 aa15.98■□□□□ 0.15
ARHGEF12-214ENST00000612968 IRX5P78411 483 aaPredicted RBP15.97■□□□□ 0.15
ARHGEF12-214ENST00000612968 OCEL1Q9H607 264 aa15.95■□□□□ 0.14
ARHGEF12-214ENST00000612968 GSE1Q14687 1217 aa15.91■□□□□ 0.14
ARHGEF12-214ENST00000612968 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
ARHGEF12-214ENST00000612968 PCDHB8Q9UN66 801 aa15.89■□□□□ 0.13
ARHGEF12-214ENST00000612968 VASPP50552 380 aaPredicted RBP15.86■□□□□ 0.13
ARHGEF12-214ENST00000612968 ZNF467Q7Z7K2 595 aaPredicted RBP15.86■□□□□ 0.13
ARHGEF12-214ENST00000612968 CDAN1Q8IWY9 1227 aa15.83■□□□□ 0.12
ARHGEF12-214ENST00000612968 ST18O60284 1047 aa15.82■□□□□ 0.12
ARHGEF12-214ENST00000612968 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.81■□□□□ 0.12
ARHGEF12-214ENST00000612968 SNPHO15079 494 aa15.79■□□□□ 0.12
ARHGEF12-214ENST00000612968 CHRM1P11229 460 aaPredicted RBP15.79■□□□□ 0.12
ARHGEF12-214ENST00000612968 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
ARHGEF12-214ENST00000612968 MKRN3Q13064 507 aaKnown RBP15.75■□□□□ 0.11
ARHGEF12-214ENST00000612968 TMEM121BQ9BXQ6 578 aaPredicted RBP15.75■□□□□ 0.11
ARHGEF12-214ENST00000612968 L3MBTL3Q96JM7 780 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF12-214ENST00000612968 C3orf67Q6ZVT6 689 aa15.67■□□□□ 0.1
ARHGEF12-214ENST00000612968 PDCD7Q8N8D1 485 aaKnown RBP15.67■□□□□ 0.1
ARHGEF12-214ENST00000612968 PSEN1P49768 467 aa15.66■□□□□ 0.1
ARHGEF12-214ENST00000612968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.091e-12■■□□□ 12.6
ARHGEF12-214ENST00000612968 PDAP1Q13442 181 aaKnown RBP15.61■□□□□ 0.09
ARHGEF12-214ENST00000612968 SPOCK2Q92563 424 aa15.6■□□□□ 0.09
ARHGEF12-214ENST00000612968 CIZ1Q9ULV3 898 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF12-214ENST00000612968 IFNLR1Q8IU57 520 aaPredicted RBP15.52■□□□□ 0.08
ARHGEF12-214ENST00000612968 ILDR1Q86SU0 546 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF12-214ENST00000612968 MARVELD3Q96A59 401 aa15.51■□□□□ 0.07
ARHGEF12-214ENST00000612968 G3V3G9 751 aa15.49■□□□□ 0.07
ARHGEF12-214ENST00000612968 CABP2Q9NPB3 220 aa15.47■□□□□ 0.07
ARHGEF12-214ENST00000612968 EMP3P54852 163 aa15.45■□□□□ 0.06
ARHGEF12-214ENST00000612968 SPNS2Q8IVW8 549 aa15.43■□□□□ 0.06
ARHGEF12-214ENST00000612968 MMRN1Q13201 1228 aa15.4■□□□□ 0.06
ARHGEF12-214ENST00000612968 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
ARHGEF12-214ENST00000612968 BOLA1Q9Y3E2 137 aa15.4■□□□□ 0.06
ARHGEF12-214ENST00000612968 DPY19L2Q6NUT2 758 aa15.39■□□□□ 0.05
ARHGEF12-214ENST00000612968 HS3ST6Q96QI5 342 aa15.32■□□□□ 0.04
ARHGEF12-214ENST00000612968 FAM205CA6NFA0 338 aa15.31■□□□□ 0.04
ARHGEF12-214ENST00000612968 ZNF710Q8N1W2 664 aa15.26■□□□□ 0.03
ARHGEF12-214ENST00000612968 DOK7Q18PE1 504 aa15.24■□□□□ 0.03
ARHGEF12-214ENST00000612968 HOXB3P14651 431 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF12-214ENST00000612968 EFCAB3Q8N7B9 438 aa15.24■□□□□ 0.03
ARHGEF12-214ENST00000612968 POTEB3A0JP26 581 aa15.21■□□□□ 0.02
ARHGEF12-214ENST00000612968 POTEBQ6S5H4 581 aa15.21■□□□□ 0.02
ARHGEF12-214ENST00000612968 KRTAP3-3Q9BYR6 98 aa15.21■□□□□ 0.02
ARHGEF12-214ENST00000612968 KRTAP3-2Q9BYR7 98 aa15.21■□□□□ 0.02
ARHGEF12-214ENST00000612968 RIMBP2O15034 1052 aa15.2■□□□□ 0.02
ARHGEF12-214ENST00000612968 HOXB1P14653 301 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF12-214ENST00000612968 SOX12O15370 315 aa15.16■□□□□ 0.02
ARHGEF12-214ENST00000612968 RIOK3O14730 519 aaKnown RBP15.14■□□□□ 0.01
ARHGEF12-214ENST00000612968 ERBB3P21860 1342 aa15.12■□□□□ 0.01
ARHGEF12-214ENST00000612968 MICALL2Q8IY33 904 aa15.11■□□□□ 0.01
ARHGEF12-214ENST00000612968 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF12-214ENST00000612968 ZSWIM6Q9HCJ5 1215 aa15.09■□□□□ 0.01
ARHGEF12-214ENST00000612968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.05■□□□□ -0
ARHGEF12-214ENST00000612968 ZFP91Q96JP5 570 aaPredicted RBP15.05■□□□□ -0
ARHGEF12-214ENST00000612968 RNF25Q96BH1 459 aaPredicted RBP15.02■□□□□ -0
ARHGEF12-214ENST00000612968 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
ARHGEF12-214ENST00000612968 VARS2Q5ST30 1063 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms