RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 SALL2Q9Y467 1007 aaPredicted RBP27.84■■■□□ 2.05
SMAD6-205ENST00000612349 MRS2Q9HD23 443 aa27.83■■■□□ 2.05
SMAD6-205ENST00000612349 BAZ1AQ9NRL2 1556 aaPredicted RBP27.83■■■□□ 2.05
SMAD6-205ENST00000612349 EIF4G2P78344 907 aaKnown RBP eCLIP27.83■■■□□ 2.04
SMAD6-205ENST00000612349 PPP1R15AO75807 674 aaPredicted RBP27.81■■■□□ 2.04
SMAD6-205ENST00000612349 ANP32BQ92688 251 aaKnown RBP27.79■■■□□ 2.04
SMAD6-205ENST00000612349 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.03
SMAD6-205ENST00000612349 CCDC136Q96JN2 1154 aa27.74■■■□□ 2.03
SMAD6-205ENST00000612349 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
SMAD6-205ENST00000612349 CFDP1Q9UEE9 299 aaPredicted RBP27.71■■■□□ 2.03
SMAD6-205ENST00000612349 TNIKQ9UKE5 1360 aa27.71■■■□□ 2.03
SMAD6-205ENST00000612349 CEP164Q9UPV0 1460 aa27.71■■■□□ 2.03
SMAD6-205ENST00000612349 SCAF1Q9H7N4 1312 aaKnown RBP27.7■■■□□ 2.02
SMAD6-205ENST00000612349 CDCA8Q53HL2 280 aa27.67■■■□□ 2.02
SMAD6-205ENST00000612349 ERCC6Q03468 1493 aa27.66■■■□□ 2.02
SMAD6-205ENST00000612349 MYH16Q9H6N6 1097 aa27.63■■■□□ 2.01
SMAD6-205ENST00000612349 C14orf37Q86TY3 774 aa27.6■■■□□ 2.01
SMAD6-205ENST00000612349 HIRIP3Q9BW71 556 aaPredicted RBP27.59■■■□□ 2.01
SMAD6-205ENST00000612349 RGL3Q3MIN7 710 aa27.57■■■□□ 2
SMAD6-205ENST00000612349 ARID4BQ4LE39 1312 aaPredicted RBP27.56■■■□□ 2
SMAD6-205ENST00000612349 CFAP53Q96M91 514 aa27.56■■■□□ 2
SMAD6-205ENST00000612349 A0A0G2JS52 829 aa27.49■■□□□ 1.99
SMAD6-205ENST00000612349 ZBTB7CA1YPR0 619 aa27.47■■□□□ 1.99
SMAD6-205ENST00000612349 KNSTRNQ9Y448 316 aa27.46■■□□□ 1.99
SMAD6-205ENST00000612349 CARMIL1Q5VZK9 1371 aa27.46■■□□□ 1.99
SMAD6-205ENST00000612349 SENP3Q9H4L4 574 aaPredicted RBP27.45■■□□□ 1.99
SMAD6-205ENST00000612349 CUX2O14529 1486 aa27.44■■□□□ 1.98
SMAD6-205ENST00000612349 CARD11Q9BXL7 1154 aa27.41■■□□□ 1.98
SMAD6-205ENST00000612349 MIER1Q8N108 512 aa27.41■■□□□ 1.98
SMAD6-205ENST00000612349 HAP1P54257 671 aaPredicted RBP27.4■■□□□ 1.98
SMAD6-205ENST00000612349 FHAD1B1AJZ9 1412 aa27.37■■□□□ 1.97
SMAD6-205ENST00000612349 SOGA1O94964 1423 aa27.36■■□□□ 1.97
SMAD6-205ENST00000612349 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
SMAD6-205ENST00000612349 CCNB3Q8WWL7 1395 aa27.34■■□□□ 1.97
SMAD6-205ENST00000612349 PLEKHG5O94827 1062 aa27.34■■□□□ 1.97
SMAD6-205ENST00000612349 POGKQ9P215 609 aa27.31■■□□□ 1.96
SMAD6-205ENST00000612349 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
SMAD6-205ENST00000612349 NUDCQ9Y266 331 aa27.3■■□□□ 1.96
SMAD6-205ENST00000612349 EIF5BO60841 1220 aaKnown RBP27.28■■□□□ 1.96
SMAD6-205ENST00000612349 EIF4G1Q04637 1599 aaKnown RBP27.25■■□□□ 1.95
SMAD6-205ENST00000612349 PPM1GO15355 546 aaPredicted RBP27.25■■□□□ 1.95
SMAD6-205ENST00000612349 SMARCA2P51531 1590 aa27.24■■□□□ 1.95
SMAD6-205ENST00000612349 MAPK8IP3Q9UPT6 1336 aa27.24■■□□□ 1.95
SMAD6-205ENST00000612349 KANK1Q14678 1352 aa27.22■■□□□ 1.95
SMAD6-205ENST00000612349 HDGFP51858 240 aaKnown RBP27.21■■□□□ 1.95
SMAD6-205ENST00000612349 BECN1Q14457 450 aa27.21■■□□□ 1.95
SMAD6-205ENST00000612349 SIN3AQ96ST3 1273 aa27.21■■□□□ 1.95
SMAD6-205ENST00000612349 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
SMAD6-205ENST00000612349 IRX6P78412 446 aaPredicted RBP27.2■■□□□ 1.95
SMAD6-205ENST00000612349 DDRGK1Q96HY6 314 aa27.16■■□□□ 1.94
SMAD6-205ENST00000612349 FTSJ3Q8IY81 847 aaKnown RBP27.14■■□□□ 1.93
SMAD6-205ENST00000612349 TIMELESSQ9UNS1 1208 aa27.13■■□□□ 1.93
SMAD6-205ENST00000612349 CHMP4BQ9H444 224 aaKnown RBP27.11■■□□□ 1.93
SMAD6-205ENST00000612349 PNNQ9H307 717 aaKnown RBP27.11■■□□□ 1.93
SMAD6-205ENST00000612349 NCLP19338 710 aaKnown RBP27.11■■□□□ 1.93
SMAD6-205ENST00000612349 LMOD2Q6P5Q4 547 aa27.11■■□□□ 1.93
SMAD6-205ENST00000612349 TDRD9Q8NDG6 1382 aaKnown RBP27.11■■□□□ 1.93
SMAD6-205ENST00000612349 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
SMAD6-205ENST00000612349 TMF1P82094 1093 aa27.09■■□□□ 1.93
SMAD6-205ENST00000612349 CASC1Q6TDU7 716 aa27.08■■□□□ 1.93
SMAD6-205ENST00000612349 ARXQ96QS3 562 aa27.08■■□□□ 1.93
SMAD6-205ENST00000612349 ANP32EQ9BTT0 268 aa27.08■■□□□ 1.93
SMAD6-205ENST00000612349 CDK11BP21127 795 aaKnown RBP27.07■■□□□ 1.92
SMAD6-205ENST00000612349 NBR1Q14596 966 aa27.06■■□□□ 1.92
SMAD6-205ENST00000612349 GOLGA6L22H0YM25 854 aa27.06■■□□□ 1.92
SMAD6-205ENST00000612349 CARMIL2Q6F5E8 1435 aa27.06■■□□□ 1.92
SMAD6-205ENST00000612349 VPS8Q8N3P4 1428 aa27.06■■□□□ 1.92
SMAD6-205ENST00000612349 NEUROD2Q15784 382 aa27.05■■□□□ 1.92
SMAD6-205ENST00000612349 MS4A1P11836 297 aa27.05■■□□□ 1.92
SMAD6-205ENST00000612349 DCAF11Q8TEB1 546 aa27.03■■□□□ 1.92
SMAD6-205ENST00000612349 LAS1LQ9Y4W2 734 aaKnown RBP27.02■■□□□ 1.92
SMAD6-205ENST00000612349 TRHP20396 242 aaPredicted RBP27■■□□□ 1.91
SMAD6-205ENST00000612349 GLIPR1L2Q4G1C9 344 aa27■■□□□ 1.91
SMAD6-205ENST00000612349 CADPSQ9ULU8 1353 aa26.97■■□□□ 1.91
SMAD6-205ENST00000612349 SENP3-EIF4A1A0A087X0R7 540 aa26.96■■□□□ 1.91
SMAD6-205ENST00000612349 U2SURPO15042 1029 aaKnown RBP26.96■■□□□ 1.91
SMAD6-205ENST00000612349 KANK4Q5T7N3 995 aaPredicted RBP26.96■■□□□ 1.91
SMAD6-205ENST00000612349 TOP2AP11388 1531 aaKnown RBP26.94■■□□□ 1.9
SMAD6-205ENST00000612349 ARHGAP35Q9NRY4 1499 aa26.94■■□□□ 1.9
SMAD6-205ENST00000612349 TNNT2P45379 298 aaPredicted RBP26.93■■□□□ 1.9
SMAD6-205ENST00000612349 MLECQ14165 292 aa26.93■■□□□ 1.9
SMAD6-205ENST00000612349 CC2D1BQ5T0F9 858 aaKnown RBP26.92■■□□□ 1.9
SMAD6-205ENST00000612349 SUPT16HQ9Y5B9 1047 aaKnown RBP26.92■■□□□ 1.9
SMAD6-205ENST00000612349 SRPK2P78362 688 aaKnown RBP26.9■■□□□ 1.9
SMAD6-205ENST00000612349 FMN1Q68DA7 1419 aa26.9■■□□□ 1.9
SMAD6-205ENST00000612349 EFCAB2Q5VUJ9 269 aa26.89■■□□□ 1.9
SMAD6-205ENST00000612349 SETD5Q9C0A6 1442 aa26.89■■□□□ 1.9
SMAD6-205ENST00000612349 GGT6Q6P531 493 aa26.88■■□□□ 1.89
SMAD6-205ENST00000612349 ZRSR1Q15695 479 aaKnown RBP26.88■■□□□ 1.89
SMAD6-205ENST00000612349 FRAT1Q92837 279 aaPredicted RBP26.87■■□□□ 1.89
SMAD6-205ENST00000612349 WIZO95785 1651 aa26.87■■□□□ 1.89
SMAD6-205ENST00000612349 NPHP1O15259 732 aa26.85■■□□□ 1.89
SMAD6-205ENST00000612349 PKD2Q13563 968 aa26.84■■□□□ 1.89
SMAD6-205ENST00000612349 PPP4R2Q9NY27 417 aa26.84■■□□□ 1.89
SMAD6-205ENST00000612349 MORC1Q86VD1 984 aa26.83■■□□□ 1.89
SMAD6-205ENST00000612349 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
SMAD6-205ENST00000612349 OS9Q13438 667 aaPredicted RBP26.81■■□□□ 1.88
SMAD6-205ENST00000612349 TRIM44Q96DX7 344 aaPredicted RBP26.79■■□□□ 1.88
SMAD6-205ENST00000612349 HDGFL2Q7Z4V5 671 aaPredicted RBP26.78■■□□□ 1.88
SMAD6-205ENST00000612349 ANKRD30AQ9BXX3 1397 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms