RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 MTUS2Q5JR59 1369 aa19.23■□□□□ 0.67
SYNRG-217ENST00000612223 PPM1GO15355 546 aaPredicted RBP19.22■□□□□ 0.67
SYNRG-217ENST00000612223 PLEKHD1A6NEE1 506 aa19.2■□□□□ 0.66
SYNRG-217ENST00000612223 RGL3Q3MIN7 710 aa19.2■□□□□ 0.66
SYNRG-217ENST00000612223 RRP7BPQ9NSQ0 103 aa19.18■□□□□ 0.66
SYNRG-217ENST00000612223 FKBP8Q14318 412 aa19.17■□□□□ 0.66
SYNRG-217ENST00000612223 MLECQ14165 292 aa19.11■□□□□ 0.65
SYNRG-217ENST00000612223 MRS2Q9HD23 443 aa19.08■□□□□ 0.65
SYNRG-217ENST00000612223 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.65
SYNRG-217ENST00000612223 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
SYNRG-217ENST00000612223 CCDC136Q96JN2 1154 aa19.07■□□□□ 0.64
SYNRG-217ENST00000612223 POGKQ9P215 609 aa19.06■□□□□ 0.64
SYNRG-217ENST00000612223 TAOK2Q9UL54 1235 aa19.05■□□□□ 0.64
SYNRG-217ENST00000612223 LAS1LQ9Y4W2 734 aaKnown RBP19.05■□□□□ 0.64
SYNRG-217ENST00000612223 CFAP53Q96M91 514 aa19.01■□□□□ 0.63
SYNRG-217ENST00000612223 SENP3-EIF4A1A0A087X0R7 540 aa18.99■□□□□ 0.63
SYNRG-217ENST00000612223 TPRNQ4KMQ1 711 aa18.97■□□□□ 0.63
SYNRG-217ENST00000612223 CFDP1Q9UEE9 299 aaPredicted RBP18.97■□□□□ 0.63
SYNRG-217ENST00000612223 SOX12O15370 315 aa18.95■□□□□ 0.62
SYNRG-217ENST00000612223 EIF5BO60841 1220 aaKnown RBP18.94■□□□□ 0.62
SYNRG-217ENST00000612223 NEUROD2Q15784 382 aa18.94■□□□□ 0.62
SYNRG-217ENST00000612223 IRX6P78412 446 aaPredicted RBP18.94■□□□□ 0.62
SYNRG-217ENST00000612223 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
SYNRG-217ENST00000612223 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.62
SYNRG-217ENST00000612223 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
SYNRG-217ENST00000612223 KNSTRNQ9Y448 316 aa18.91■□□□□ 0.62
SYNRG-217ENST00000612223 NCLP19338 710 aaKnown RBP18.91■□□□□ 0.62
SYNRG-217ENST00000612223 MAPK8IP3Q9UPT6 1336 aa18.89■□□□□ 0.61
SYNRG-217ENST00000612223 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
SYNRG-217ENST00000612223 OS9Q13438 667 aaPredicted RBP18.86■□□□□ 0.61
SYNRG-217ENST00000612223 NBR1Q14596 966 aa18.86■□□□□ 0.61
SYNRG-217ENST00000612223 CDCA8Q53HL2 280 aa18.86■□□□□ 0.61
SYNRG-217ENST00000612223 RSF1Q96T23 1441 aaPredicted RBP18.86■□□□□ 0.61
SYNRG-217ENST00000612223 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
SYNRG-217ENST00000612223 ZRSR1Q15695 479 aaKnown RBP18.85■□□□□ 0.61
SYNRG-217ENST00000612223 FTSJ3Q8IY81 847 aaKnown RBP18.85■□□□□ 0.61
SYNRG-217ENST00000612223 CASC1Q6TDU7 716 aa18.83■□□□□ 0.6
SYNRG-217ENST00000612223 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
SYNRG-217ENST00000612223 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
SYNRG-217ENST00000612223 CARD11Q9BXL7 1154 aa18.82■□□□□ 0.6
SYNRG-217ENST00000612223 ISY1Q9ULR0 285 aaKnown RBP18.82■□□□□ 0.6
SYNRG-217ENST00000612223 HDGFP51858 240 aaKnown RBP18.81■□□□□ 0.6
SYNRG-217ENST00000612223 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
SYNRG-217ENST00000612223 NAP1L2Q9ULW6 460 aaPredicted RBP18.8■□□□□ 0.6
SYNRG-217ENST00000612223 SAFB2Q14151 953 aaKnown RBP eCLIP18.79■□□□□ 0.6
SYNRG-217ENST00000612223 CLSTN1O94985 981 aa18.79■□□□□ 0.6
SYNRG-217ENST00000612223 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
SYNRG-217ENST00000612223 CLIP1P30622 1438 aa18.76■□□□□ 0.59
SYNRG-217ENST00000612223 PAK3O75914 559 aaPredicted RBP18.75■□□□□ 0.59
SYNRG-217ENST00000612223 FGD1P98174 961 aa18.75■□□□□ 0.59
SYNRG-217ENST00000612223 SRPK2P78362 688 aaKnown RBP18.74■□□□□ 0.59
SYNRG-217ENST00000612223 CSB-PGBD3P0DP91 1061 aa18.73■□□□□ 0.59
SYNRG-217ENST00000612223 GGT6Q6P531 493 aa18.73■□□□□ 0.59
SYNRG-217ENST00000612223 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
SYNRG-217ENST00000612223 CC2D1BQ5T0F9 858 aaKnown RBP18.72■□□□□ 0.59
SYNRG-217ENST00000612223 BECN1Q14457 450 aa18.71■□□□□ 0.59
SYNRG-217ENST00000612223 STK26Q9P289 416 aa18.71■□□□□ 0.59
SYNRG-217ENST00000612223 FRAT1Q92837 279 aaPredicted RBP18.71■□□□□ 0.59
SYNRG-217ENST00000612223 KANK1Q14678 1352 aa18.7■□□□□ 0.58
SYNRG-217ENST00000612223 KCNJ4P48050 445 aa18.7■□□□□ 0.58
SYNRG-217ENST00000612223 RB1CC1Q8TDY2 1594 aa18.7■□□□□ 0.58
SYNRG-217ENST00000612223 GOLGA6L22H0YM25 854 aa18.68■□□□□ 0.58
SYNRG-217ENST00000612223 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
SYNRG-217ENST00000612223 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
SYNRG-217ENST00000612223 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
SYNRG-217ENST00000612223 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
SYNRG-217ENST00000612223 PTMAP06454 111 aaKnown RBP18.62■□□□□ 0.57
SYNRG-217ENST00000612223 PNNQ9H307 717 aaKnown RBP18.62■□□□□ 0.57
SYNRG-217ENST00000612223 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
SYNRG-217ENST00000612223 CCNB3Q8WWL7 1395 aa18.6■□□□□ 0.57
SYNRG-217ENST00000612223 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.57
SYNRG-217ENST00000612223 TRIM44Q96DX7 344 aaPredicted RBP18.58■□□□□ 0.56
SYNRG-217ENST00000612223 PLCB2Q00722 1185 aa18.58■□□□□ 0.56
SYNRG-217ENST00000612223 DDRGK1Q96HY6 314 aa18.58■□□□□ 0.56
SYNRG-217ENST00000612223 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
SYNRG-217ENST00000612223 G3V3G9 751 aa18.54■□□□□ 0.56
SYNRG-217ENST00000612223 DCAF8Q5TAQ9 597 aa18.54■□□□□ 0.56
SYNRG-217ENST00000612223 TMF1P82094 1093 aa18.54■□□□□ 0.56
SYNRG-217ENST00000612223 MORC1Q86VD1 984 aa18.54■□□□□ 0.56
SYNRG-217ENST00000612223 MIER1Q8N108 512 aa18.53■□□□□ 0.56
SYNRG-217ENST00000612223 RGS3P49796 1198 aa18.53■□□□□ 0.56
SYNRG-217ENST00000612223 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.52■□□□□ 0.55
SYNRG-217ENST00000612223 CHMP4BQ9H444 224 aaKnown RBP18.52■□□□□ 0.55
SYNRG-217ENST00000612223 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
SYNRG-217ENST00000612223 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
SYNRG-217ENST00000612223 DNTTIP2Q5QJE6 756 aaKnown RBP18.5■□□□□ 0.55
SYNRG-217ENST00000612223 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
SYNRG-217ENST00000612223 SIN3AQ96ST3 1273 aa18.48■□□□□ 0.55
SYNRG-217ENST00000612223 APBB1O00213 710 aa18.47■□□□□ 0.55
SYNRG-217ENST00000612223 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
SYNRG-217ENST00000612223 MS4A1P11836 297 aa18.45■□□□□ 0.54
SYNRG-217ENST00000612223 EID1Q9Y6B2 187 aa18.45■□□□□ 0.54
SYNRG-217ENST00000612223 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
SYNRG-217ENST00000612223 GNL2Q13823 731 aaKnown RBP18.44■□□□□ 0.54
SYNRG-217ENST00000612223 NUTM2DQ5VT03 806 aaPredicted RBP18.44■□□□□ 0.54
SYNRG-217ENST00000612223 GLIPR1L2Q4G1C9 344 aa18.43■□□□□ 0.54
SYNRG-217ENST00000612223 GOLGA6L4A6NEF3 574 aa18.43■□□□□ 0.54
SYNRG-217ENST00000612223 MSH5O43196 834 aa18.43■□□□□ 0.54
SYNRG-217ENST00000612223 GOLGA6L6A8MZA4 724 aa18.42■□□□□ 0.54
SYNRG-217ENST00000612223 ANP32EQ9BTT0 268 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms