RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 ATMINO43313 823 aaPredicted RBP14.26□□□□□ -0.13
TARDBP-212ENST00000611008 SLC39A7Q92504 469 aa14.26□□□□□ -0.13
TARDBP-212ENST00000611008 PLSCR2Q9NRY7 297 aa14.26□□□□□ -0.13
TARDBP-212ENST00000611008 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
TARDBP-212ENST00000611008 C7P10643 843 aa14.24□□□□□ -0.13
TARDBP-212ENST00000611008 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
TARDBP-212ENST00000611008 MIER1Q8N108 512 aa14.2□□□□□ -0.14
TARDBP-212ENST00000611008 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
TARDBP-212ENST00000611008 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
TARDBP-212ENST00000611008 MAMSTRQ6ZN01 415 aa14.13□□□□□ -0.15
TARDBP-212ENST00000611008 POTEMA6NI47 508 aa14.11□□□□□ -0.15
TARDBP-212ENST00000611008 POTEJP0CG39 1038 aa14.09□□□□□ -0.15
TARDBP-212ENST00000611008 RASEFQ8IZ41 740 aa14.09□□□□□ -0.15
TARDBP-212ENST00000611008 MAP3K13O43283 966 aa14.08□□□□□ -0.16
TARDBP-212ENST00000611008 POTEGQ6S5H5 508 aa14.07□□□□□ -0.16
TARDBP-212ENST00000611008 PLCD3Q8N3E9 789 aa14.07□□□□□ -0.16
TARDBP-212ENST00000611008 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
TARDBP-212ENST00000611008 TIE1P35590 1138 aa14.04□□□□□ -0.16
TARDBP-212ENST00000611008 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
TARDBP-212ENST00000611008 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
TARDBP-212ENST00000611008 ZBTB47Q9UFB7 747 aaPredicted RBP13.99□□□□□ -0.17
TARDBP-212ENST00000611008 POTEFA5A3E0 1075 aa13.96□□□□□ -0.17
TARDBP-212ENST00000611008 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
TARDBP-212ENST00000611008 SEC24BO95487 1268 aa13.94□□□□□ -0.18
TARDBP-212ENST00000611008 SGIP1Q9BQI5 828 aa13.93□□□□□ -0.18
TARDBP-212ENST00000611008 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
TARDBP-212ENST00000611008 PCDH10Q9P2E7 1040 aa13.92□□□□□ -0.18
TARDBP-212ENST00000611008 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
TARDBP-212ENST00000611008 NUBP1P53384 320 aa13.89□□□□□ -0.19
TARDBP-212ENST00000611008 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-212ENST00000611008 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
TARDBP-212ENST00000611008 IER5LQ5T953 404 aa13.85□□□□□ -0.19
TARDBP-212ENST00000611008 FAM212AQ96EL1 285 aa13.85□□□□□ -0.19
TARDBP-212ENST00000611008 LCE2DQ5TA82 110 aaPredicted RBP13.84□□□□□ -0.19
TARDBP-212ENST00000611008 FKBP8Q14318 412 aa13.82□□□□□ -0.2
TARDBP-212ENST00000611008 IFNL1Q8IU54 200 aa13.81□□□□□ -0.2
TARDBP-212ENST00000611008 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
TARDBP-212ENST00000611008 PLCG2P16885 1265 aa13.71□□□□□ -0.21
TARDBP-212ENST00000611008 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
TARDBP-212ENST00000611008 SLAIN1Q8ND83 568 aa13.68□□□□□ -0.22
TARDBP-212ENST00000611008 PYGBP11216 843 aa13.65□□□□□ -0.22
TARDBP-212ENST00000611008 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
TARDBP-212ENST00000611008 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-212ENST00000611008 OCEL1Q9H607 264 aa13.59□□□□□ -0.23
TARDBP-212ENST00000611008 CDAN1Q8IWY9 1227 aa13.58□□□□□ -0.24
TARDBP-212ENST00000611008 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
TARDBP-212ENST00000611008 ST18O60284 1047 aa13.56□□□□□ -0.24
TARDBP-212ENST00000611008 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
TARDBP-212ENST00000611008 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
TARDBP-212ENST00000611008 GSE1Q14687 1217 aa13.49□□□□□ -0.25
TARDBP-212ENST00000611008 ZNF467Q7Z7K2 595 aaPredicted RBP13.47□□□□□ -0.25
TARDBP-212ENST00000611008 SNPHO15079 494 aa13.46□□□□□ -0.25
TARDBP-212ENST00000611008 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
TARDBP-212ENST00000611008 GOLGA2Q08379 1002 aa13.45□□□□□ -0.26
TARDBP-212ENST00000611008 TMEM121BQ9BXQ6 578 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-212ENST00000611008 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
TARDBP-212ENST00000611008 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
TARDBP-212ENST00000611008 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
TARDBP-212ENST00000611008 PDCD7Q8N8D1 485 aaKnown RBP13.37□□□□□ -0.27
TARDBP-212ENST00000611008 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-212ENST00000611008 PSEN1P49768 467 aa13.35□□□□□ -0.27
TARDBP-212ENST00000611008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
TARDBP-212ENST00000611008 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
TARDBP-212ENST00000611008 PDAP1Q13442 181 aaKnown RBP13.27□□□□□ -0.29
TARDBP-212ENST00000611008 SPNS2Q8IVW8 549 aa13.24□□□□□ -0.29
TARDBP-212ENST00000611008 MMRN1Q13201 1228 aa13.23□□□□□ -0.29
TARDBP-212ENST00000611008 CIZ1Q9ULV3 898 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-212ENST00000611008 EMP3P54852 163 aa13.22□□□□□ -0.29
TARDBP-212ENST00000611008 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
TARDBP-212ENST00000611008 G3V3G9 751 aa13.19□□□□□ -0.3
TARDBP-212ENST00000611008 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-212ENST00000611008 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
TARDBP-212ENST00000611008 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-212ENST00000611008 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
TARDBP-212ENST00000611008 BOLA1Q9Y3E2 137 aa13.13□□□□□ -0.31
TARDBP-212ENST00000611008 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
TARDBP-212ENST00000611008 HS3ST6Q96QI5 342 aa13.12□□□□□ -0.31
TARDBP-212ENST00000611008 POTEB3A0JP26 581 aa13.06□□□□□ -0.32
TARDBP-212ENST00000611008 POTEBQ6S5H4 581 aa13.06□□□□□ -0.32
TARDBP-212ENST00000611008 KRTAP3-3Q9BYR6 98 aa13.04□□□□□ -0.32
TARDBP-212ENST00000611008 KRTAP3-2Q9BYR7 98 aa13.04□□□□□ -0.32
TARDBP-212ENST00000611008 ZNF710Q8N1W2 664 aa13.03□□□□□ -0.32
TARDBP-212ENST00000611008 HOXB3P14651 431 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-212ENST00000611008 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
TARDBP-212ENST00000611008 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
TARDBP-212ENST00000611008 EFCAB3Q8N7B9 438 aa12.99□□□□□ -0.33
TARDBP-212ENST00000611008 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-212ENST00000611008 ERBB3P21860 1342 aa12.93□□□□□ -0.34
TARDBP-212ENST00000611008 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
TARDBP-212ENST00000611008 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
TARDBP-212ENST00000611008 SOX12O15370 315 aa12.86□□□□□ -0.35
TARDBP-212ENST00000611008 RIOK3O14730 519 aaKnown RBP12.85□□□□□ -0.35
TARDBP-212ENST00000611008 VARS2Q5ST30 1063 aaKnown RBP12.83□□□□□ -0.36
TARDBP-212ENST00000611008 TMEM92Q6UXU6 159 aa12.82□□□□□ -0.36
TARDBP-212ENST00000611008 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
TARDBP-212ENST00000611008 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-212ENST00000611008 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-212ENST00000611008 VGFO15240 615 aaPredicted RBP12.8□□□□□ -0.36
TARDBP-212ENST00000611008 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
TARDBP-212ENST00000611008 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms