RNA–Protein interactions for RNA: ENST00000610569.1

PCDHGA8-202, Transcript of protocadherin gamma subfamily A, 8, humanhuman

APPRIS P1 BASIC

Gene PCDHGA8, Length 6,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-202ENST00000610569 IRX6P78412 446 aaPredicted RBP16.39■□□□□ 0.22
PCDHGA8-202ENST00000610569 HIRIP3Q9BW71 556 aaPredicted RBP16.38■□□□□ 0.21
PCDHGA8-202ENST00000610569 GLIPR1L2Q4G1C9 344 aa16.37■□□□□ 0.21
PCDHGA8-202ENST00000610569 KCNH8Q96L42 1107 aa16.34■□□□□ 0.21
PCDHGA8-202ENST00000610569 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.21
PCDHGA8-202ENST00000610569 RRP7BPQ9NSQ0 103 aa16.32■□□□□ 0.2
PCDHGA8-202ENST00000610569 EIF4G2P78344 907 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCDHGA8-202ENST00000610569 NCLP19338 710 aaKnown RBP16.31■□□□□ 0.2
PCDHGA8-202ENST00000610569 RGL3Q3MIN7 710 aa16.28■□□□□ 0.2
PCDHGA8-202ENST00000610569 BECN1Q14457 450 aa16.27■□□□□ 0.19
PCDHGA8-202ENST00000610569 ARID4BQ4LE39 1312 aaPredicted RBP16.26■□□□□ 0.19
PCDHGA8-202ENST00000610569 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
PCDHGA8-202ENST00000610569 CFAP53Q96M91 514 aa16.25■□□□□ 0.19
PCDHGA8-202ENST00000610569 MIER1Q8N108 512 aa16.22■□□□□ 0.19
PCDHGA8-202ENST00000610569 SENP3-EIF4A1A0A087X0R7 540 aa16.22■□□□□ 0.19
PCDHGA8-202ENST00000610569 PLEKHD1A6NEE1 506 aa16.22■□□□□ 0.19
PCDHGA8-202ENST00000610569 GOLGA6L22H0YM25 854 aa16.22■□□□□ 0.19
PCDHGA8-202ENST00000610569 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
PCDHGA8-202ENST00000610569 TRIM44Q96DX7 344 aaPredicted RBP16.21■□□□□ 0.18
PCDHGA8-202ENST00000610569 TULP1O00294 542 aaPredicted RBP16.2■□□□□ 0.18
PCDHGA8-202ENST00000610569 ZRSR1Q15695 479 aaKnown RBP16.2■□□□□ 0.18
PCDHGA8-202ENST00000610569 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
PCDHGA8-202ENST00000610569 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
PCDHGA8-202ENST00000610569 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
PCDHGA8-202ENST00000610569 CLIP1P30622 1438 aa16.17■□□□□ 0.18
PCDHGA8-202ENST00000610569 CASC1Q6TDU7 716 aa16.17■□□□□ 0.18
PCDHGA8-202ENST00000610569 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
PCDHGA8-202ENST00000610569 LAS1LQ9Y4W2 734 aaKnown RBP16.17■□□□□ 0.18
PCDHGA8-202ENST00000610569 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
PCDHGA8-202ENST00000610569 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
PCDHGA8-202ENST00000610569 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
PCDHGA8-202ENST00000610569 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
PCDHGA8-202ENST00000610569 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
PCDHGA8-202ENST00000610569 ANP32EQ9BTT0 268 aa16.13■□□□□ 0.17
PCDHGA8-202ENST00000610569 NPHP1O15259 732 aa16.13■□□□□ 0.17
PCDHGA8-202ENST00000610569 MAPK8IP3Q9UPT6 1336 aa16.12■□□□□ 0.17
PCDHGA8-202ENST00000610569 TAOK2Q9UL54 1235 aa16.11■□□□□ 0.17
PCDHGA8-202ENST00000610569 CARD11Q9BXL7 1154 aa16.11■□□□□ 0.17
PCDHGA8-202ENST00000610569 CFDP1Q9UEE9 299 aaPredicted RBP16.1■□□□□ 0.17
PCDHGA8-202ENST00000610569 POGKQ9P215 609 aa16.1■□□□□ 0.17
PCDHGA8-202ENST00000610569 NUDCQ9Y266 331 aa16.08■□□□□ 0.16
PCDHGA8-202ENST00000610569 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
PCDHGA8-202ENST00000610569 DNTTIP2Q5QJE6 756 aaKnown RBP16.06■□□□□ 0.16
PCDHGA8-202ENST00000610569 TNNT2P45379 298 aaPredicted RBP16.06■□□□□ 0.16
PCDHGA8-202ENST00000610569 OS9Q13438 667 aaPredicted RBP16.04■□□□□ 0.16
PCDHGA8-202ENST00000610569 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
PCDHGA8-202ENST00000610569 SUPT16HQ9Y5B9 1047 aaKnown RBP16.02■□□□□ 0.16
PCDHGA8-202ENST00000610569 RGS3P49796 1198 aa16.01■□□□□ 0.15
PCDHGA8-202ENST00000610569 FGD1P98174 961 aa16.01■□□□□ 0.15
PCDHGA8-202ENST00000610569 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
PCDHGA8-202ENST00000610569 PLCB2Q00722 1185 aa16■□□□□ 0.15
PCDHGA8-202ENST00000610569 NAP1L2Q9ULW6 460 aaPredicted RBP15.99■□□□□ 0.15
PCDHGA8-202ENST00000610569 CC2D1BQ5T0F9 858 aaKnown RBP15.98■□□□□ 0.15
PCDHGA8-202ENST00000610569 KCNJ4P48050 445 aa15.98■□□□□ 0.15
PCDHGA8-202ENST00000610569 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
PCDHGA8-202ENST00000610569 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
PCDHGA8-202ENST00000610569 CHMP4BQ9H444 224 aaKnown RBP15.95■□□□□ 0.14
PCDHGA8-202ENST00000610569 HSP90AB1P08238 724 aaKnown RBP15.95■□□□□ 0.14
PCDHGA8-202ENST00000610569 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
PCDHGA8-202ENST00000610569 SOX12O15370 315 aa15.93■□□□□ 0.14
PCDHGA8-202ENST00000610569 MS4A1P11836 297 aa15.92■□□□□ 0.14
PCDHGA8-202ENST00000610569 GOLGA6L6A8MZA4 724 aa15.92■□□□□ 0.14
PCDHGA8-202ENST00000610569 PNNQ9H307 717 aaKnown RBP15.92■□□□□ 0.14
PCDHGA8-202ENST00000610569 SIN3AQ96ST3 1273 aa15.9■□□□□ 0.14
PCDHGA8-202ENST00000610569 MLECQ14165 292 aa15.89■□□□□ 0.13
PCDHGA8-202ENST00000610569 EEA1Q15075 1411 aa15.88■□□□□ 0.13
PCDHGA8-202ENST00000610569 PPP4R2Q9NY27 417 aa15.88■□□□□ 0.13
PCDHGA8-202ENST00000610569 NAP1L5Q96NT1 182 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA8-202ENST00000610569 ERICH6BQ5W0A0 696 aa15.88■□□□□ 0.13
PCDHGA8-202ENST00000610569 GOLGA6L4A6NEF3 574 aa15.87■□□□□ 0.13
PCDHGA8-202ENST00000610569 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
PCDHGA8-202ENST00000610569 TMF1P82094 1093 aa15.87■□□□□ 0.13
PCDHGA8-202ENST00000610569 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
PCDHGA8-202ENST00000610569 CLSTN1O94985 981 aa15.86■□□□□ 0.13
PCDHGA8-202ENST00000610569 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
PCDHGA8-202ENST00000610569 NRDCO43847 1150 aa15.85■□□□□ 0.13
PCDHGA8-202ENST00000610569 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
PCDHGA8-202ENST00000610569 ISY1Q9ULR0 285 aaKnown RBP15.85■□□□□ 0.13
PCDHGA8-202ENST00000610569 SAFB2Q14151 953 aaKnown RBP eCLIP15.84■□□□□ 0.13
PCDHGA8-202ENST00000610569 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
PCDHGA8-202ENST00000610569 WRNQ14191 1432 aaPredicted RBP eCLIP15.84■□□□□ 0.13
PCDHGA8-202ENST00000610569 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.13
PCDHGA8-202ENST00000610569 ERCC6Q03468 1493 aa15.83■□□□□ 0.13
PCDHGA8-202ENST00000610569 KANK1Q14678 1352 aa15.83■□□□□ 0.13
PCDHGA8-202ENST00000610569 CCNB3Q8WWL7 1395 aa15.83■□□□□ 0.12
PCDHGA8-202ENST00000610569 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
PCDHGA8-202ENST00000610569 MORC1Q86VD1 984 aa15.81■□□□□ 0.12
PCDHGA8-202ENST00000610569 RTN4Q9NQC3 1192 aaKnown RBP15.8■□□□□ 0.12
PCDHGA8-202ENST00000610569 MCCP23508 829 aa15.8■□□□□ 0.12
PCDHGA8-202ENST00000610569 NOP58Q9Y2X3 529 aaKnown RBP15.8■□□□□ 0.12
PCDHGA8-202ENST00000610569 B4GALNT3Q6L9W6 998 aa15.8■□□□□ 0.12
PCDHGA8-202ENST00000610569 RTF1Q92541 710 aaKnown RBP15.8■□□□□ 0.12
PCDHGA8-202ENST00000610569 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
PCDHGA8-202ENST00000610569 SPRYD3Q8NCJ5 442 aa15.76■□□□□ 0.11
PCDHGA8-202ENST00000610569 STK26Q9P289 416 aa15.76■□□□□ 0.11
PCDHGA8-202ENST00000610569 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
PCDHGA8-202ENST00000610569 RB1CC1Q8TDY2 1594 aa15.76■□□□□ 0.11
PCDHGA8-202ENST00000610569 APBB1O00213 710 aa15.75■□□□□ 0.11
PCDHGA8-202ENST00000610569 GNL2Q13823 731 aaKnown RBP15.75■□□□□ 0.11
PCDHGA8-202ENST00000610569 DRC7Q8IY82 874 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms