RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
CCDC144B-206ENST00000609959 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
CCDC144B-206ENST00000609959 C7P10643 843 aa12.45□□□□□ -0.42
CCDC144B-206ENST00000609959 ATMINO43313 823 aaPredicted RBP12.44□□□□□ -0.42
CCDC144B-206ENST00000609959 PELP1Q8IZL8 1130 aaKnown RBP12.44□□□□□ -0.42
CCDC144B-206ENST00000609959 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
CCDC144B-206ENST00000609959 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
CCDC144B-206ENST00000609959 OTUD5Q96G74 571 aa12.41□□□□□ -0.42
CCDC144B-206ENST00000609959 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
CCDC144B-206ENST00000609959 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
CCDC144B-206ENST00000609959 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
CCDC144B-206ENST00000609959 FKBP8Q14318 412 aa12.35□□□□□ -0.43
CCDC144B-206ENST00000609959 MAP3K13O43283 966 aa12.34□□□□□ -0.43
CCDC144B-206ENST00000609959 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
CCDC144B-206ENST00000609959 TIE1P35590 1138 aa12.32□□□□□ -0.44
CCDC144B-206ENST00000609959 SGIP1Q9BQI5 828 aa12.3□□□□□ -0.44
CCDC144B-206ENST00000609959 BMP2KQ9NSY1 1161 aaPredicted RBP12.29□□□□□ -0.44
CCDC144B-206ENST00000609959 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
CCDC144B-206ENST00000609959 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.45
CCDC144B-206ENST00000609959 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
CCDC144B-206ENST00000609959 NUBP1P53384 320 aa12.25□□□□□ -0.45
CCDC144B-206ENST00000609959 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
CCDC144B-206ENST00000609959 SEC24BO95487 1268 aa12.22□□□□□ -0.45
CCDC144B-206ENST00000609959 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
CCDC144B-206ENST00000609959 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
CCDC144B-206ENST00000609959 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
CCDC144B-206ENST00000609959 PLSCR2Q9NRY7 297 aa12.17□□□□□ -0.46
CCDC144B-206ENST00000609959 POTEMA6NI47 508 aa12.16□□□□□ -0.46
CCDC144B-206ENST00000609959 IER5LQ5T953 404 aa12.16□□□□□ -0.46
CCDC144B-206ENST00000609959 DCAF8Q5TAQ9 597 aa12.14□□□□□ -0.47
CCDC144B-206ENST00000609959 TRIM35Q9UPQ4 493 aa12.14□□□□□ -0.47
CCDC144B-206ENST00000609959 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
CCDC144B-206ENST00000609959 IFNL1Q8IU54 200 aa12.12□□□□□ -0.47
CCDC144B-206ENST00000609959 POTEFA5A3E0 1075 aa12.11□□□□□ -0.47
CCDC144B-206ENST00000609959 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
CCDC144B-206ENST00000609959 PCDH10Q9P2E7 1040 aa12.09□□□□□ -0.47
CCDC144B-206ENST00000609959 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
CCDC144B-206ENST00000609959 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
CCDC144B-206ENST00000609959 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
CCDC144B-206ENST00000609959 PYGBP11216 843 aa12.03□□□□□ -0.48
CCDC144B-206ENST00000609959 PLCG2P16885 1265 aa12.03□□□□□ -0.48
CCDC144B-206ENST00000609959 GSE1Q14687 1217 aa12.02□□□□□ -0.49
CCDC144B-206ENST00000609959 VASPP50552 380 aaPredicted RBP11.99□□□□□ -0.49
CCDC144B-206ENST00000609959 ZNF467Q7Z7K2 595 aaPredicted RBP11.95□□□□□ -0.5
CCDC144B-206ENST00000609959 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
CCDC144B-206ENST00000609959 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
CCDC144B-206ENST00000609959 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
CCDC144B-206ENST00000609959 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
CCDC144B-206ENST00000609959 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
CCDC144B-206ENST00000609959 LCE2DQ5TA82 110 aaPredicted RBP11.9□□□□□ -0.5
CCDC144B-206ENST00000609959 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
CCDC144B-206ENST00000609959 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
CCDC144B-206ENST00000609959 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.84□□□□□ -0.51
CCDC144B-206ENST00000609959 SNPHO15079 494 aa11.82□□□□□ -0.52
CCDC144B-206ENST00000609959 SPOCK2Q92563 424 aa11.81□□□□□ -0.52
CCDC144B-206ENST00000609959 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
CCDC144B-206ENST00000609959 PSEN1P49768 467 aa11.78□□□□□ -0.52
CCDC144B-206ENST00000609959 ST18O60284 1047 aa11.77□□□□□ -0.53
CCDC144B-206ENST00000609959 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
CCDC144B-206ENST00000609959 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
CCDC144B-206ENST00000609959 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
CCDC144B-206ENST00000609959 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
CCDC144B-206ENST00000609959 TMEM121BQ9BXQ6 578 aaPredicted RBP11.74□□□□□ -0.53
CCDC144B-206ENST00000609959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC144B-206ENST00000609959 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
CCDC144B-206ENST00000609959 PDCD7Q8N8D1 485 aaKnown RBP11.72□□□□□ -0.53
CCDC144B-206ENST00000609959 G3V3G9 751 aa11.67□□□□□ -0.54
CCDC144B-206ENST00000609959 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
CCDC144B-206ENST00000609959 CABP2Q9NPB3 220 aa11.63□□□□□ -0.55
CCDC144B-206ENST00000609959 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
CCDC144B-206ENST00000609959 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
CCDC144B-206ENST00000609959 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
CCDC144B-206ENST00000609959 EMP3P54852 163 aa11.53□□□□□ -0.56
CCDC144B-206ENST00000609959 DPY19L2Q6NUT2 758 aa11.53□□□□□ -0.56
CCDC144B-206ENST00000609959 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
CCDC144B-206ENST00000609959 ZNF710Q8N1W2 664 aa11.45□□□□□ -0.58
CCDC144B-206ENST00000609959 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
CCDC144B-206ENST00000609959 SPNS2Q8IVW8 549 aa11.44□□□□□ -0.58
CCDC144B-206ENST00000609959 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
CCDC144B-206ENST00000609959 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
CCDC144B-206ENST00000609959 SOX12O15370 315 aa11.42□□□□□ -0.58
CCDC144B-206ENST00000609959 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
CCDC144B-206ENST00000609959 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
CCDC144B-206ENST00000609959 VGFO15240 615 aaPredicted RBP11.41□□□□□ -0.58
CCDC144B-206ENST00000609959 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
CCDC144B-206ENST00000609959 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
CCDC144B-206ENST00000609959 HOXB3P14651 431 aaPredicted RBP11.37□□□□□ -0.59
CCDC144B-206ENST00000609959 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-206ENST00000609959 ZFP91Q96JP5 570 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-206ENST00000609959 HOXB1P14653 301 aaPredicted RBP11.35□□□□□ -0.59
CCDC144B-206ENST00000609959 MICALL2Q8IY33 904 aa11.34□□□□□ -0.59
CCDC144B-206ENST00000609959 ERBB3P21860 1342 aa11.33□□□□□ -0.6
CCDC144B-206ENST00000609959 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
CCDC144B-206ENST00000609959 POTEB3A0JP26 581 aa11.3□□□□□ -0.6
CCDC144B-206ENST00000609959 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
CCDC144B-206ENST00000609959 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
CCDC144B-206ENST00000609959 KRTAP3-3Q9BYR6 98 aa11.29□□□□□ -0.6
CCDC144B-206ENST00000609959 KRTAP3-2Q9BYR7 98 aa11.29□□□□□ -0.6
CCDC144B-206ENST00000609959 NLRP6P59044 892 aa11.28□□□□□ -0.6
CCDC144B-206ENST00000609959 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms