RNA–Protein interactions for RNA: ENST00000609740.1

CCDC138-208, Transcript of coiled-coil domain containing 138, humanhuman

Gene CCDC138, Length 3,285 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-208ENST00000609740 BCCIPQ9P287 314 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCDC138-208ENST00000609740 BICRAQ9NZM4 1560 aa11.68□□□□□ -0.54
CCDC138-208ENST00000609740 SCRIBQ14160 1630 aa11.6□□□□□ -0.55
CCDC138-208ENST00000609740 MYT1LQ9UL68 1186 aa11.6□□□□□ -0.55
CCDC138-208ENST00000609740 CCDC9Q9Y3X0 531 aaKnown RBP11.6□□□□□ -0.55
CCDC138-208ENST00000609740 VSIG10Q8N0Z9 540 aa11.57□□□□□ -0.56
CCDC138-208ENST00000609740 HMGB1P09429 215 aaKnown RBP11.57□□□□□ -0.56
CCDC138-208ENST00000609740 NAP1L2Q9ULW6 460 aaPredicted RBP11.55□□□□□ -0.56
CCDC138-208ENST00000609740 BRPF3Q9ULD4 1205 aa11.53□□□□□ -0.56
CCDC138-208ENST00000609740 KDM2AQ9Y2K7 1162 aa11.49□□□□□ -0.57
CCDC138-208ENST00000609740 ZFP91Q96JP5 570 aaPredicted RBP11.48□□□□□ -0.57
CCDC138-208ENST00000609740 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.46□□□□□ -0.58
CCDC138-208ENST00000609740 PRDM10Q9NQV6 1147 aa11.45□□□□□ -0.58
CCDC138-208ENST00000609740 CNPY4Q8N129 248 aa11.44□□□□□ -0.58
CCDC138-208ENST00000609740 PUS7Q96PZ0 661 aaKnown RBP11.44□□□□□ -0.58
CCDC138-208ENST00000609740 TICAM2Q86XR7 235 aa11.43□□□□□ -0.58
CCDC138-208ENST00000609740 NCLP19338 710 aaKnown RBP11.43□□□□□ -0.58
CCDC138-208ENST00000609740 ZNF592Q92610 1267 aa11.43□□□□□ -0.58
CCDC138-208ENST00000609740 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
CCDC138-208ENST00000609740 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
CCDC138-208ENST00000609740 FBLN2P98095 1184 aa11.41□□□□□ -0.58
CCDC138-208ENST00000609740 TMED8Q6PL24 325 aaPredicted RBP11.38□□□□□ -0.59
CCDC138-208ENST00000609740 IPO4Q8TEX9 1081 aaKnown RBP11.38□□□□□ -0.59
CCDC138-208ENST00000609740 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
CCDC138-208ENST00000609740 TEX2Q8IWB9 1127 aa11.37□□□□□ -0.59
CCDC138-208ENST00000609740 SECISBP2LQ93073 1101 aaKnown RBP11.37□□□□□ -0.59
CCDC138-208ENST00000609740 PCGF6Q9BYE7 350 aa11.36□□□□□ -0.59
CCDC138-208ENST00000609740 BBXQ8WY36 941 aaPredicted RBP11.33□□□□□ -0.6
CCDC138-208ENST00000609740 CLSTN1O94985 981 aa11.32□□□□□ -0.6
CCDC138-208ENST00000609740 WWC1Q8IX03 1113 aa11.3□□□□□ -0.6
CCDC138-208ENST00000609740 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
CCDC138-208ENST00000609740 PABPN1Q86U42 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC138-208ENST00000609740 FTSJ3Q8IY81 847 aaKnown RBP11.27□□□□□ -0.61
CCDC138-208ENST00000609740 PSMD1Q99460 953 aa11.27□□□□□ -0.61
CCDC138-208ENST00000609740 IL27Q8NEV9 243 aa11.26□□□□□ -0.61
CCDC138-208ENST00000609740 EIF4G1Q04637 1599 aaKnown RBP11.25□□□□□ -0.61
CCDC138-208ENST00000609740 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
CCDC138-208ENST00000609740 KCNG1Q9UIX4 513 aa11.24□□□□□ -0.61
CCDC138-208ENST00000609740 ARID3AQ99856 593 aa11.23□□□□□ -0.61
CCDC138-208ENST00000609740 ZNF526Q8TF50 670 aaPredicted RBP11.23□□□□□ -0.61
CCDC138-208ENST00000609740 CERS3Q8IU89 383 aa11.22□□□□□ -0.61
CCDC138-208ENST00000609740 TRIM41Q8WV44 630 aa11.22□□□□□ -0.61
CCDC138-208ENST00000609740 PLCD4Q9BRC7 762 aa11.21□□□□□ -0.61
CCDC138-208ENST00000609740 PHF23Q9BUL5 403 aaPredicted RBP11.21□□□□□ -0.61
CCDC138-208ENST00000609740 GTF2E1P29083 439 aaPredicted RBP11.21□□□□□ -0.62
CCDC138-208ENST00000609740 CWC22Q9HCG8 908 aaKnown RBP11.2□□□□□ -0.62
CCDC138-208ENST00000609740 CANXP27824 592 aaKnown RBP11.19□□□□□ -0.62
CCDC138-208ENST00000609740 SMARCA4P51532 1647 aa11.19□□□□□ -0.62
CCDC138-208ENST00000609740 CC2D2AQ9P2K1 1620 aa11.18□□□□□ -0.62
CCDC138-208ENST00000609740 ZNF692Q9BU19 519 aaPredicted RBP11.17□□□□□ -0.62
CCDC138-208ENST00000609740 PRDM16Q9HAZ2 1276 aa11.17□□□□□ -0.62
CCDC138-208ENST00000609740 NECTIN2Q92692 538 aa11.17□□□□□ -0.62
CCDC138-208ENST00000609740 FAM43BQ6ZT52 329 aaPredicted RBP11.16□□□□□ -0.62
CCDC138-208ENST00000609740 CECR2Q9BXF3 1484 aa11.15□□□□□ -0.62
CCDC138-208ENST00000609740 PEG3Q9GZU2 1588 aa11.14□□□□□ -0.63
CCDC138-208ENST00000609740 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
CCDC138-208ENST00000609740 ZNF428Q96B54 188 aa11.13□□□□□ -0.63
CCDC138-208ENST00000609740 RTL5Q5HYW3 569 aaPredicted RBP11.13□□□□□ -0.63
CCDC138-208ENST00000609740 PTMSP20962 102 aa11.12□□□□□ -0.63
CCDC138-208ENST00000609740 ARID4BQ4LE39 1312 aaPredicted RBP11.12□□□□□ -0.63
CCDC138-208ENST00000609740 GRIPAP1Q4V328 841 aa11.12□□□□□ -0.63
CCDC138-208ENST00000609740 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
CCDC138-208ENST00000609740 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC138-208ENST00000609740 BAZ1AQ9NRL2 1556 aaPredicted RBP11.11□□□□□ -0.63
CCDC138-208ENST00000609740 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
CCDC138-208ENST00000609740 MROH2BQ7Z745 1585 aa11.08□□□□□ -0.64
CCDC138-208ENST00000609740 DNAJC5BQ9UF47 199 aa11.08□□□□□ -0.64
CCDC138-208ENST00000609740 PATL2C9JE40 543 aaKnown RBP11.08□□□□□ -0.64
CCDC138-208ENST00000609740 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
CCDC138-208ENST00000609740 FOXD1Q16676 465 aa11.07□□□□□ -0.64
CCDC138-208ENST00000609740 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
CCDC138-208ENST00000609740 FAM193AP78312 1265 aa11.07□□□□□ -0.64
CCDC138-208ENST00000609740 YTHDC1Q96MU7 727 aaKnown RBP11.07□□□□□ -0.64
CCDC138-208ENST00000609740 MCCP23508 829 aa11.04□□□□□ -0.64
CCDC138-208ENST00000609740 ZBTB22O15209 634 aa11.04□□□□□ -0.64
CCDC138-208ENST00000609740 OS9Q13438 667 aaPredicted RBP11.03□□□□□ -0.64
CCDC138-208ENST00000609740 FKBP8Q14318 412 aa11.03□□□□□ -0.64
CCDC138-208ENST00000609740 CC2D2BQ6DHV5 1058 aa11.03□□□□□ -0.64
CCDC138-208ENST00000609740 MSH5O43196 834 aa11.03□□□□□ -0.64
CCDC138-208ENST00000609740 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
CCDC138-208ENST00000609740 WIZO95785 1651 aa11.02□□□□□ -0.64
CCDC138-208ENST00000609740 HMGXB3Q12766 1538 aa11.02□□□□□ -0.65
CCDC138-208ENST00000609740 ANAPC15P60006 121 aa11.01□□□□□ -0.65
CCDC138-208ENST00000609740 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
CCDC138-208ENST00000609740 NEFMP07197 916 aa11□□□□□ -0.65
CCDC138-208ENST00000609740 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
CCDC138-208ENST00000609740 SMARCA2P51531 1590 aa11□□□□□ -0.65
CCDC138-208ENST00000609740 SETQ01105 290 aaPredicted RBP10.99□□□□□ -0.65
CCDC138-208ENST00000609740 RBM19Q9Y4C8 960 aaKnown RBP10.99□□□□□ -0.65
CCDC138-208ENST00000609740 SUPT16HQ9Y5B9 1047 aaKnown RBP10.99□□□□□ -0.65
CCDC138-208ENST00000609740 FAM177A1Q8N128 213 aaPredicted RBP10.98□□□□□ -0.65
CCDC138-208ENST00000609740 NCAPD3P42695 1498 aa10.98□□□□□ -0.65
CCDC138-208ENST00000609740 PPM1GO15355 546 aaPredicted RBP10.98□□□□□ -0.65
CCDC138-208ENST00000609740 HSP90AA2PQ14568 343 aaPredicted RBP10.97□□□□□ -0.65
CCDC138-208ENST00000609740 GPATCH11Q8N954 259 aa10.97□□□□□ -0.65
CCDC138-208ENST00000609740 RRP9O43818 475 aaKnown RBP10.96□□□□□ -0.65
CCDC138-208ENST00000609740 USP35Q9P2H5 1018 aa10.96□□□□□ -0.66
CCDC138-208ENST00000609740 CCDC27Q2M243 656 aa10.95□□□□□ -0.66
CCDC138-208ENST00000609740 PRDM4Q9UKN5 801 aa10.95□□□□□ -0.66
CCDC138-208ENST00000609740 DNAJC2Q99543 621 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms