RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 PROM2Q8N271 834 aa15.97■□□□□ 0.15
LINC01990-201ENST00000609293 DCBLD2Q96PD2 775 aa15.96■□□□□ 0.14
LINC01990-201ENST00000609293 CECR2Q9BXF3 1484 aa15.95■□□□□ 0.14
LINC01990-201ENST00000609293 ZCCHC6Q5VYS8 1495 aaKnown RBP15.89■□□□□ 0.13
LINC01990-201ENST00000609293 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
LINC01990-201ENST00000609293 MNX1P50219 401 aaPredicted RBP15.88■□□□□ 0.13
LINC01990-201ENST00000609293 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
LINC01990-201ENST00000609293 EIF4G1Q04637 1599 aaKnown RBP15.86■□□□□ 0.13
LINC01990-201ENST00000609293 POTEMA6NI47 508 aa15.84■□□□□ 0.13
LINC01990-201ENST00000609293 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
LINC01990-201ENST00000609293 GALR2O43603 387 aaPredicted RBP15.78■□□□□ 0.12
LINC01990-201ENST00000609293 PHF12Q96QT6 1004 aa15.78■□□□□ 0.12
LINC01990-201ENST00000609293 POTEGQ6S5H5 508 aa15.76■□□□□ 0.11
LINC01990-201ENST00000609293 PCDH10Q9P2E7 1040 aa15.75■□□□□ 0.11
LINC01990-201ENST00000609293 OTUD5Q96G74 571 aa15.72■□□□□ 0.11
LINC01990-201ENST00000609293 MIER1Q8N108 512 aa15.71■□□□□ 0.1
LINC01990-201ENST00000609293 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
LINC01990-201ENST00000609293 DNAJC5Q9H3Z4 198 aa15.61■□□□□ 0.09
LINC01990-201ENST00000609293 PLCD3Q8N3E9 789 aa15.59■□□□□ 0.09
LINC01990-201ENST00000609293 MS4A3Q96HJ5 214 aa15.58■□□□□ 0.08
LINC01990-201ENST00000609293 ZBTB47Q9UFB7 747 aaPredicted RBP15.57■□□□□ 0.08
LINC01990-201ENST00000609293 CCDC61Q9Y6R9 512 aa15.56■□□□□ 0.08
LINC01990-201ENST00000609293 FKBP8Q14318 412 aa15.54■□□□□ 0.08
LINC01990-201ENST00000609293 ASTLQ6HA08 431 aaPredicted RBP15.51■□□□□ 0.07
LINC01990-201ENST00000609293 POTEB2H3BUK9 544 aa15.5■□□□□ 0.07
LINC01990-201ENST00000609293 KIF12Q96FN5 646 aa15.47■□□□□ 0.07
LINC01990-201ENST00000609293 ATMINO43313 823 aaPredicted RBP15.46■□□□□ 0.07
LINC01990-201ENST00000609293 SLC39A7Q92504 469 aa15.46■□□□□ 0.07
LINC01990-201ENST00000609293 RASEFQ8IZ41 740 aa15.45■□□□□ 0.06
LINC01990-201ENST00000609293 C7P10643 843 aa15.44■□□□□ 0.06
LINC01990-201ENST00000609293 PELP1Q8IZL8 1130 aaKnown RBP15.44■□□□□ 0.06
LINC01990-201ENST00000609293 METRNQ9UJH8 293 aa15.41■□□□□ 0.06
LINC01990-201ENST00000609293 MAP3K13O43283 966 aa15.37■□□□□ 0.05
LINC01990-201ENST00000609293 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
LINC01990-201ENST00000609293 CUX2O14529 1486 aa15.36■□□□□ 0.05
LINC01990-201ENST00000609293 TIE1P35590 1138 aa15.33■□□□□ 0.05
LINC01990-201ENST00000609293 SGIP1Q9BQI5 828 aa15.33■□□□□ 0.05
LINC01990-201ENST00000609293 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
LINC01990-201ENST00000609293 FAM212AQ96EL1 285 aa15.33■□□□□ 0.04
LINC01990-201ENST00000609293 NUBP1P53384 320 aa15.32■□□□□ 0.04
LINC01990-201ENST00000609293 ERCC6Q03468 1493 aa15.3■□□□□ 0.04
LINC01990-201ENST00000609293 MAMSTRQ6ZN01 415 aa15.3■□□□□ 0.04
LINC01990-201ENST00000609293 BMP2KQ9NSY1 1161 aaPredicted RBP15.29■□□□□ 0.04
LINC01990-201ENST00000609293 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
LINC01990-201ENST00000609293 LCE2DQ5TA82 110 aaPredicted RBP15.22■□□□□ 0.03
LINC01990-201ENST00000609293 TRPC6Q9Y210 931 aa15.22■□□□□ 0.03
LINC01990-201ENST00000609293 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
LINC01990-201ENST00000609293 TTLL13PA6NNM8 815 aa15.19■□□□□ 0.02
LINC01990-201ENST00000609293 SCUBE2Q9NQ36 999 aa15.18■□□□□ 0.02
LINC01990-201ENST00000609293 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
LINC01990-201ENST00000609293 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
LINC01990-201ENST00000609293 SEC24BO95487 1268 aa15.14■□□□□ 0.01
LINC01990-201ENST00000609293 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
LINC01990-201ENST00000609293 SMARCA2P51531 1590 aa15.13■□□□□ 0.01
LINC01990-201ENST00000609293 IER5LQ5T953 404 aa15.13■□□□□ 0.01
LINC01990-201ENST00000609293 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
LINC01990-201ENST00000609293 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
LINC01990-201ENST00000609293 POTEJP0CG39 1038 aa15.11■□□□□ 0.01
LINC01990-201ENST00000609293 FAM163AQ96GL9 167 aaPredicted RBP15.1■□□□□ 0.01
LINC01990-201ENST00000609293 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
LINC01990-201ENST00000609293 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
LINC01990-201ENST00000609293 NESP48681 1621 aa15.09■□□□□ 0.01
LINC01990-201ENST00000609293 VASPP50552 380 aaPredicted RBP15.08■□□□□ 0
LINC01990-201ENST00000609293 POTEFA5A3E0 1075 aa15.07■□□□□ 0
LINC01990-201ENST00000609293 TMEM106CQ9BVX2 250 aa15.07■□□□□ 0
LINC01990-201ENST00000609293 THOC2Q8NI27 1593 aaKnown RBP15.04■□□□□ -0
LINC01990-201ENST00000609293 GSE1Q14687 1217 aa15.03■□□□□ -0
LINC01990-201ENST00000609293 BAZ1BQ9UIG0 1483 aaKnown RBP15.02□□□□□ -0.01
LINC01990-201ENST00000609293 PYGBP11216 843 aa15.01□□□□□ -0.01
LINC01990-201ENST00000609293 COLQQ9Y215 455 aaPredicted RBP15.01□□□□□ -0.01
LINC01990-201ENST00000609293 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
LINC01990-201ENST00000609293 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
LINC01990-201ENST00000609293 KIF21AQ7Z4S6 1674 aa14.98□□□□□ -0.01
LINC01990-201ENST00000609293 PLCG2P16885 1265 aa14.95□□□□□ -0.02
LINC01990-201ENST00000609293 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
LINC01990-201ENST00000609293 CDAN1Q8IWY9 1227 aa14.94□□□□□ -0.02
LINC01990-201ENST00000609293 ZNF467Q7Z7K2 595 aaPredicted RBP14.91□□□□□ -0.02
LINC01990-201ENST00000609293 PCDHB8Q9UN66 801 aa14.9□□□□□ -0.02
LINC01990-201ENST00000609293 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
LINC01990-201ENST00000609293 CHRM1P11229 460 aaPredicted RBP14.87□□□□□ -0.03
LINC01990-201ENST00000609293 IRX5P78411 483 aaPredicted RBP14.86□□□□□ -0.03
LINC01990-201ENST00000609293 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
LINC01990-201ENST00000609293 OCEL1Q9H607 264 aa14.85□□□□□ -0.03
LINC01990-201ENST00000609293 SPOCK2Q92563 424 aa14.82□□□□□ -0.04
LINC01990-201ENST00000609293 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
LINC01990-201ENST00000609293 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
LINC01990-201ENST00000609293 SLAIN1Q8ND83 568 aa14.79□□□□□ -0.04
LINC01990-201ENST00000609293 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.04
LINC01990-201ENST00000609293 WDR62O43379 1518 aa14.76□□□□□ -0.05
LINC01990-201ENST00000609293 MKRN3Q13064 507 aaKnown RBP14.76□□□□□ -0.05
LINC01990-201ENST00000609293 IFNLR1Q8IU57 520 aaPredicted RBP14.75□□□□□ -0.05
LINC01990-201ENST00000609293 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
LINC01990-201ENST00000609293 CIZ1Q9ULV3 898 aaPredicted RBP14.74□□□□□ -0.05
LINC01990-201ENST00000609293 PSEN1P49768 467 aa14.72□□□□□ -0.05
LINC01990-201ENST00000609293 MMRN1Q13201 1228 aa14.7□□□□□ -0.06
LINC01990-201ENST00000609293 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.7□□□□□ -0.06
LINC01990-201ENST00000609293 PDAP1Q13442 181 aaKnown RBP14.69□□□□□ -0.06
LINC01990-201ENST00000609293 WIZO95785 1651 aa14.67□□□□□ -0.06
LINC01990-201ENST00000609293 CEP164Q9UPV0 1460 aa14.67□□□□□ -0.06
LINC01990-201ENST00000609293 L3MBTL3Q96JM7 780 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms