RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
HDDC2-207ENST00000608532 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
HDDC2-207ENST00000608532 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
HDDC2-207ENST00000608532 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
HDDC2-207ENST00000608532 GSE1Q14687 1217 aa13.17□□□□□ -0.3
HDDC2-207ENST00000608532 GABBR2O75899 941 aa13.15□□□□□ -0.3
HDDC2-207ENST00000608532 PYGBP11216 843 aa13.11□□□□□ -0.31
HDDC2-207ENST00000608532 KIF12Q96FN5 646 aa13.09□□□□□ -0.31
HDDC2-207ENST00000608532 MAP3K13O43283 966 aa13.07□□□□□ -0.32
HDDC2-207ENST00000608532 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
HDDC2-207ENST00000608532 CLCN6P51797 869 aa13.06□□□□□ -0.32
HDDC2-207ENST00000608532 MS4A3Q96HJ5 214 aa13.05□□□□□ -0.32
HDDC2-207ENST00000608532 PCDHB13Q9Y5F0 798 aa13.03□□□□□ -0.32
HDDC2-207ENST00000608532 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
HDDC2-207ENST00000608532 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.33
HDDC2-207ENST00000608532 CHRM1P11229 460 aaPredicted RBP12.95□□□□□ -0.34
HDDC2-207ENST00000608532 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
HDDC2-207ENST00000608532 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
HDDC2-207ENST00000608532 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
HDDC2-207ENST00000608532 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
HDDC2-207ENST00000608532 PKD2Q13563 968 aa12.92□□□□□ -0.34
HDDC2-207ENST00000608532 TRPC6Q9Y210 931 aa12.92□□□□□ -0.34
HDDC2-207ENST00000608532 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
HDDC2-207ENST00000608532 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
HDDC2-207ENST00000608532 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
HDDC2-207ENST00000608532 TIE1P35590 1138 aa12.82□□□□□ -0.36
HDDC2-207ENST00000608532 TMEM106CQ9BVX2 250 aa12.82□□□□□ -0.36
HDDC2-207ENST00000608532 RIOK3O14730 519 aaKnown RBP12.8□□□□□ -0.36
HDDC2-207ENST00000608532 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-207ENST00000608532 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-207ENST00000608532 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
HDDC2-207ENST00000608532 PSEN1P49768 467 aa12.79□□□□□ -0.36
HDDC2-207ENST00000608532 RGL2O15211 777 aa12.78□□□□□ -0.36
HDDC2-207ENST00000608532 PDAP1Q13442 181 aaKnown RBP12.78□□□□□ -0.36
HDDC2-207ENST00000608532 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
HDDC2-207ENST00000608532 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
HDDC2-207ENST00000608532 PELP1Q8IZL8 1130 aaKnown RBP12.75□□□□□ -0.37
HDDC2-207ENST00000608532 AMER1Q5JTC6 1135 aaPredicted RBP12.74□□□□□ -0.37
HDDC2-207ENST00000608532 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
HDDC2-207ENST00000608532 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
HDDC2-207ENST00000608532 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
HDDC2-207ENST00000608532 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-207ENST00000608532 ZFP91Q96JP5 570 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-207ENST00000608532 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
HDDC2-207ENST00000608532 DCAF8L2P0C7V8 631 aa12.67□□□□□ -0.38
HDDC2-207ENST00000608532 GOLGA2Q08379 1002 aa12.67□□□□□ -0.38
HDDC2-207ENST00000608532 SLC39A7Q92504 469 aa12.66□□□□□ -0.38
HDDC2-207ENST00000608532 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
HDDC2-207ENST00000608532 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
HDDC2-207ENST00000608532 C7P10643 843 aa12.62□□□□□ -0.39
HDDC2-207ENST00000608532 STK25O00506 426 aa12.61□□□□□ -0.39
HDDC2-207ENST00000608532 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
HDDC2-207ENST00000608532 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
HDDC2-207ENST00000608532 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
HDDC2-207ENST00000608532 SEC24BO95487 1268 aa12.59□□□□□ -0.39
HDDC2-207ENST00000608532 IER5LQ5T953 404 aa12.57□□□□□ -0.4
HDDC2-207ENST00000608532 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
HDDC2-207ENST00000608532 EFCAB3Q8N7B9 438 aa12.55□□□□□ -0.4
HDDC2-207ENST00000608532 COLQQ9Y215 455 aaPredicted RBP12.54□□□□□ -0.4
HDDC2-207ENST00000608532 PLCG2P16885 1265 aa12.53□□□□□ -0.4
HDDC2-207ENST00000608532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.413e-9■□□□□ 8.1
HDDC2-207ENST00000608532 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
HDDC2-207ENST00000608532 IRX5P78411 483 aaPredicted RBP12.5□□□□□ -0.41
HDDC2-207ENST00000608532 LHX8Q68G74 356 aa12.49□□□□□ -0.41
HDDC2-207ENST00000608532 OCEL1Q9H607 264 aa12.49□□□□□ -0.41
HDDC2-207ENST00000608532 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
HDDC2-207ENST00000608532 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
HDDC2-207ENST00000608532 SOX12O15370 315 aa12.43□□□□□ -0.42
HDDC2-207ENST00000608532 PHF8Q9UPP1 1060 aa12.43□□□□□ -0.42
HDDC2-207ENST00000608532 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
HDDC2-207ENST00000608532 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
HDDC2-207ENST00000608532 NLRP6P59044 892 aa12.37□□□□□ -0.43
HDDC2-207ENST00000608532 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
HDDC2-207ENST00000608532 MFRPQ9BY79 579 aa12.36□□□□□ -0.43
HDDC2-207ENST00000608532 ILDR1Q86SU0 546 aaPredicted RBP12.35□□□□□ -0.43
HDDC2-207ENST00000608532 G3V3G9 751 aa12.33□□□□□ -0.44
HDDC2-207ENST00000608532 L3MBTL3Q96JM7 780 aaPredicted RBP12.33□□□□□ -0.44
HDDC2-207ENST00000608532 MS4A4AQ96JQ5 239 aa12.33□□□□□ -0.44
HDDC2-207ENST00000608532 FBXO22Q8NEZ5 403 aa12.32□□□□□ -0.44
HDDC2-207ENST00000608532 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
HDDC2-207ENST00000608532 MAMSTRQ6ZN01 415 aa12.31□□□□□ -0.44
HDDC2-207ENST00000608532 SCUBE2Q9NQ36 999 aa12.31□□□□□ -0.44
HDDC2-207ENST00000608532 OTUD5Q96G74 571 aa12.28□□□□□ -0.44
HDDC2-207ENST00000608532 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
HDDC2-207ENST00000608532 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
HDDC2-207ENST00000608532 C3orf67Q6ZVT6 689 aa12.25□□□□□ -0.45
HDDC2-207ENST00000608532 BBXQ8WY36 941 aaPredicted RBP12.23□□□□□ -0.45
HDDC2-207ENST00000608532 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.23□□□□□ -0.45
HDDC2-207ENST00000608532 PPP1R37O75864 691 aa12.21□□□□□ -0.45
HDDC2-207ENST00000608532 MICALL2Q8IY33 904 aa12.21□□□□□ -0.45
HDDC2-207ENST00000608532 RYDENQ9NUL5 291 aaKnown RBP12.2□□□□□ -0.46
HDDC2-207ENST00000608532 SLAIN1Q8ND83 568 aa12.19□□□□□ -0.46
HDDC2-207ENST00000608532 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.19□□□□□ -0.46
HDDC2-207ENST00000608532 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
HDDC2-207ENST00000608532 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
HDDC2-207ENST00000608532 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
HDDC2-207ENST00000608532 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
HDDC2-207ENST00000608532 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
HDDC2-207ENST00000608532 TMEM92Q6UXU6 159 aa12.05□□□□□ -0.48
HDDC2-207ENST00000608532 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms