RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 RTN4Q9NQC3 1192 aaKnown RBP16.48■□□□□ 0.23
LINC00343-211ENST00000608426 ZRANB1Q9UGI0 708 aa16.47■□□□□ 0.23
LINC00343-211ENST00000608426 PKD2Q13563 968 aa16.41■□□□□ 0.22
LINC00343-211ENST00000608426 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
LINC00343-211ENST00000608426 EVX2Q03828 476 aa16.37■□□□□ 0.21
LINC00343-211ENST00000608426 ECM2O94769 699 aaPredicted RBP16.35■□□□□ 0.21
LINC00343-211ENST00000608426 PYGBP11216 843 aa16.35■□□□□ 0.21
LINC00343-211ENST00000608426 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
LINC00343-211ENST00000608426 PHF12Q96QT6 1004 aa16.32■□□□□ 0.2
LINC00343-211ENST00000608426 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
LINC00343-211ENST00000608426 CHRM1P11229 460 aaPredicted RBP16.24■□□□□ 0.19
LINC00343-211ENST00000608426 KIF12Q96FN5 646 aa16.23■□□□□ 0.19
LINC00343-211ENST00000608426 MAP3K13O43283 966 aa16.21■□□□□ 0.19
LINC00343-211ENST00000608426 PCDHB13Q9Y5F0 798 aa16.19■□□□□ 0.18
LINC00343-211ENST00000608426 RGL2O15211 777 aa16.17■□□□□ 0.18
LINC00343-211ENST00000608426 RNF25Q96BH1 459 aaPredicted RBP16.13■□□□□ 0.17
LINC00343-211ENST00000608426 MS4A3Q96HJ5 214 aa16.13■□□□□ 0.17
LINC00343-211ENST00000608426 SGIP1Q9BQI5 828 aa16.12■□□□□ 0.17
LINC00343-211ENST00000608426 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
LINC00343-211ENST00000608426 ZNF467Q7Z7K2 595 aaPredicted RBP16.11■□□□□ 0.17
LINC00343-211ENST00000608426 SP7Q8TDD2 431 aaPredicted RBP16.11■□□□□ 0.17
LINC00343-211ENST00000608426 PCDHB8Q9UN66 801 aa16.11■□□□□ 0.17
LINC00343-211ENST00000608426 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
LINC00343-211ENST00000608426 CLCN6P51797 869 aa16.1■□□□□ 0.17
LINC00343-211ENST00000608426 IFNL1Q8IU54 200 aa16.1■□□□□ 0.17
LINC00343-211ENST00000608426 GABBR2O75899 941 aa16.08■□□□□ 0.16
LINC00343-211ENST00000608426 GALR2O43603 387 aaPredicted RBP16.07■□□□□ 0.16
LINC00343-211ENST00000608426 TAOK2Q9UL54 1235 aa16.01■□□□□ 0.15
LINC00343-211ENST00000608426 VGFO15240 615 aaPredicted RBP16■□□□□ 0.15
LINC00343-211ENST00000608426 TRPC6Q9Y210 931 aa15.98■□□□□ 0.15
LINC00343-211ENST00000608426 PDAP1Q13442 181 aaKnown RBP15.97■□□□□ 0.15
LINC00343-211ENST00000608426 PSEN1P49768 467 aa15.95■□□□□ 0.14
LINC00343-211ENST00000608426 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.93■□□□□ 0.14
LINC00343-211ENST00000608426 ZFP91Q96JP5 570 aaPredicted RBP15.93■□□□□ 0.14
LINC00343-211ENST00000608426 TIE1P35590 1138 aa15.89■□□□□ 0.13
LINC00343-211ENST00000608426 TMEM106CQ9BVX2 250 aa15.89■□□□□ 0.13
LINC00343-211ENST00000608426 STK25O00506 426 aa15.88■□□□□ 0.13
LINC00343-211ENST00000608426 CHGAP10645 457 aaKnown RBP15.88■□□□□ 0.13
LINC00343-211ENST00000608426 DCBLD2Q96PD2 775 aa15.87■□□□□ 0.13
LINC00343-211ENST00000608426 BMP2KQ9NSY1 1161 aaPredicted RBP15.86■□□□□ 0.13
LINC00343-211ENST00000608426 BCL11BQ9C0K0 894 aaPredicted RBP15.84■□□□□ 0.13
LINC00343-211ENST00000608426 STK24Q9Y6E0 443 aa15.84■□□□□ 0.13
LINC00343-211ENST00000608426 TTLL13PA6NNM8 815 aa15.83■□□□□ 0.12
LINC00343-211ENST00000608426 HS6ST3Q8IZP7 471 aa15.81■□□□□ 0.12
LINC00343-211ENST00000608426 ATMINO43313 823 aaPredicted RBP15.78■□□□□ 0.12
LINC00343-211ENST00000608426 ATN1P54259 1190 aaPredicted RBP15.77■□□□□ 0.12
LINC00343-211ENST00000608426 ASTLQ6HA08 431 aaPredicted RBP15.77■□□□□ 0.12
LINC00343-211ENST00000608426 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
LINC00343-211ENST00000608426 GOLGA2Q08379 1002 aa15.75■□□□□ 0.11
LINC00343-211ENST00000608426 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
LINC00343-211ENST00000608426 POTEIP0CG38 1075 aa15.72■□□□□ 0.11
LINC00343-211ENST00000608426 MKRN3Q13064 507 aaKnown RBP15.67■□□□□ 0.1
LINC00343-211ENST00000608426 EFCAB3Q8N7B9 438 aa15.67■□□□□ 0.1
LINC00343-211ENST00000608426 PELP1Q8IZL8 1130 aaKnown RBP15.66■□□□□ 0.1
LINC00343-211ENST00000608426 BBXQ8WY36 941 aaPredicted RBP15.63■□□□□ 0.09
LINC00343-211ENST00000608426 DNAJC5Q9H3Z4 198 aa15.61■□□□□ 0.09
LINC00343-211ENST00000608426 NKX1-1Q15270 411 aaPredicted RBP15.58■□□□□ 0.08
LINC00343-211ENST00000608426 SLC39A7Q92504 469 aa15.58■□□□□ 0.08
LINC00343-211ENST00000608426 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.58■□□□□ 0.08
LINC00343-211ENST00000608426 SOX12O15370 315 aa15.57■□□□□ 0.08
LINC00343-211ENST00000608426 IER5LQ5T953 404 aa15.57■□□□□ 0.08
LINC00343-211ENST00000608426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.55■□□□□ 0.08
LINC00343-211ENST00000608426 PHF8Q9UPP1 1060 aa15.54■□□□□ 0.08
LINC00343-211ENST00000608426 C7P10643 843 aa15.53■□□□□ 0.08
LINC00343-211ENST00000608426 MFRPQ9BY79 579 aa15.53■□□□□ 0.08
LINC00343-211ENST00000608426 METRNQ9UJH8 293 aa15.53■□□□□ 0.08
LINC00343-211ENST00000608426 SEC24BO95487 1268 aa15.51■□□□□ 0.07
LINC00343-211ENST00000608426 NLRP6P59044 892 aa15.5■□□□□ 0.07
LINC00343-211ENST00000608426 PLCG2P16885 1265 aa15.49■□□□□ 0.07
LINC00343-211ENST00000608426 IRX5P78411 483 aaPredicted RBP15.49■□□□□ 0.07
LINC00343-211ENST00000608426 PAXIP1Q6ZW49 1069 aaPredicted RBP15.46■□□□□ 0.07
LINC00343-211ENST00000608426 FBXO22Q8NEZ5 403 aa15.46■□□□□ 0.07
LINC00343-211ENST00000608426 CFAP44Q96MT7 982 aa15.46■□□□□ 0.07
LINC00343-211ENST00000608426 OCEL1Q9H607 264 aa15.46■□□□□ 0.07
LINC00343-211ENST00000608426 SPRYD3Q8NCJ5 442 aa15.45■□□□□ 0.06
LINC00343-211ENST00000608426 RYDENQ9NUL5 291 aaKnown RBP15.45■□□□□ 0.06
LINC00343-211ENST00000608426 COLQQ9Y215 455 aaPredicted RBP15.45■□□□□ 0.06
LINC00343-211ENST00000608426 GTPBP6O43824 516 aaPredicted RBP15.43■□□□□ 0.06
LINC00343-211ENST00000608426 ILDR1Q86SU0 546 aaPredicted RBP15.42■□□□□ 0.06
LINC00343-211ENST00000608426 MS4A4AQ96JQ5 239 aa15.42■□□□□ 0.06
LINC00343-211ENST00000608426 POTEFA5A3E0 1075 aa15.41■□□□□ 0.06
LINC00343-211ENST00000608426 PDCD7Q8N8D1 485 aaKnown RBP15.41■□□□□ 0.06
LINC00343-211ENST00000608426 DPY19L2Q6NUT2 758 aa15.38■□□□□ 0.05
LINC00343-211ENST00000608426 PLCB2Q00722 1185 aa15.35■□□□□ 0.05
LINC00343-211ENST00000608426 PPP1R37O75864 691 aa15.32■□□□□ 0.04
LINC00343-211ENST00000608426 G3V3G9 751 aa15.29■□□□□ 0.04
LINC00343-211ENST00000608426 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
LINC00343-211ENST00000608426 BOLA1Q9Y3E2 137 aa15.26■□□□□ 0.03
LINC00343-211ENST00000608426 POTEB2H3BUK9 544 aa15.23■□□□□ 0.03
LINC00343-211ENST00000608426 MICALL2Q8IY33 904 aa15.21■□□□□ 0.03
LINC00343-211ENST00000608426 HAP1P54257 671 aaPredicted RBP15.18■□□□□ 0.02
LINC00343-211ENST00000608426 POTEJP0CG39 1038 aa15.15■□□□□ 0.02
LINC00343-211ENST00000608426 C3orf67Q6ZVT6 689 aa15.15■□□□□ 0.02
LINC00343-211ENST00000608426 TMEM121BQ9BXQ6 578 aaPredicted RBP15.15■□□□□ 0.02
LINC00343-211ENST00000608426 TSHZ2Q9NRE2 1034 aa15.14■□□□□ 0.01
LINC00343-211ENST00000608426 LHX8Q68G74 356 aa15.13■□□□□ 0.01
LINC00343-211ENST00000608426 MAMSTRQ6ZN01 415 aa15.09■□□□□ 0.01
LINC00343-211ENST00000608426 SCUBE2Q9NQ36 999 aa15.09■□□□□ 0.01
LINC00343-211ENST00000608426 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.09■□□□□ 0.01
LINC00343-211ENST00000608426 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms