RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 METRNQ9UJH8 293 aa13.55□□□□□ -0.24
RNU4-89P-201ENST00000607443 C7P10643 843 aa13.54□□□□□ -0.24
RNU4-89P-201ENST00000607443 SLC39A7Q92504 469 aa13.54□□□□□ -0.24
RNU4-89P-201ENST00000607443 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
RNU4-89P-201ENST00000607443 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
RNU4-89P-201ENST00000607443 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
RNU4-89P-201ENST00000607443 PROM2Q8N271 834 aa13.45□□□□□ -0.26
RNU4-89P-201ENST00000607443 MAMSTRQ6ZN01 415 aa13.44□□□□□ -0.26
RNU4-89P-201ENST00000607443 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
RNU4-89P-201ENST00000607443 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
RNU4-89P-201ENST00000607443 KIF12Q96FN5 646 aa13.4□□□□□ -0.26
RNU4-89P-201ENST00000607443 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
RNU4-89P-201ENST00000607443 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
RNU4-89P-201ENST00000607443 LCE2DQ5TA82 110 aaPredicted RBP13.32□□□□□ -0.28
RNU4-89P-201ENST00000607443 SCUBE2Q9NQ36 999 aa13.32□□□□□ -0.28
RNU4-89P-201ENST00000607443 POTEFA5A3E0 1075 aa13.31□□□□□ -0.28
RNU4-89P-201ENST00000607443 FAM163AQ96GL9 167 aaPredicted RBP13.3□□□□□ -0.28
RNU4-89P-201ENST00000607443 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
RNU4-89P-201ENST00000607443 MAP3K13O43283 966 aa13.29□□□□□ -0.28
RNU4-89P-201ENST00000607443 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
RNU4-89P-201ENST00000607443 TIE1P35590 1138 aa13.26□□□□□ -0.29
RNU4-89P-201ENST00000607443 MIER1Q8N108 512 aa13.26□□□□□ -0.29
RNU4-89P-201ENST00000607443 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
RNU4-89P-201ENST00000607443 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
RNU4-89P-201ENST00000607443 TTLL13PA6NNM8 815 aa13.18□□□□□ -0.3
RNU4-89P-201ENST00000607443 SEC24BO95487 1268 aa13.16□□□□□ -0.3
RNU4-89P-201ENST00000607443 SGIP1Q9BQI5 828 aa13.13□□□□□ -0.31
RNU4-89P-201ENST00000607443 IER5LQ5T953 404 aa13.1□□□□□ -0.31
RNU4-89P-201ENST00000607443 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
RNU4-89P-201ENST00000607443 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
RNU4-89P-201ENST00000607443 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
RNU4-89P-201ENST00000607443 NUBP1P53384 320 aa13.04□□□□□ -0.32
RNU4-89P-201ENST00000607443 IFNL1Q8IU54 200 aa13.01□□□□□ -0.33
RNU4-89P-201ENST00000607443 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
RNU4-89P-201ENST00000607443 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
RNU4-89P-201ENST00000607443 SLAIN1Q8ND83 568 aa12.98□□□□□ -0.33
RNU4-89P-201ENST00000607443 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
RNU4-89P-201ENST00000607443 ST18O60284 1047 aa12.94□□□□□ -0.34
RNU4-89P-201ENST00000607443 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
RNU4-89P-201ENST00000607443 PLCG2P16885 1265 aa12.92□□□□□ -0.34
RNU4-89P-201ENST00000607443 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
RNU4-89P-201ENST00000607443 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
RNU4-89P-201ENST00000607443 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
RNU4-89P-201ENST00000607443 PYGBP11216 843 aa12.78□□□□□ -0.36
RNU4-89P-201ENST00000607443 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.37
RNU4-89P-201ENST00000607443 SNPHO15079 494 aa12.75□□□□□ -0.37
RNU4-89P-201ENST00000607443 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.75□□□□□ -0.37
RNU4-89P-201ENST00000607443 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
RNU4-89P-201ENST00000607443 FKBP8Q14318 412 aa12.72□□□□□ -0.37
RNU4-89P-201ENST00000607443 MMRN1Q13201 1228 aa12.71□□□□□ -0.37
RNU4-89P-201ENST00000607443 SPNS2Q8IVW8 549 aa12.71□□□□□ -0.37
RNU4-89P-201ENST00000607443 MARVELD3Q96A59 401 aa12.67□□□□□ -0.38
RNU4-89P-201ENST00000607443 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
RNU4-89P-201ENST00000607443 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
RNU4-89P-201ENST00000607443 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
RNU4-89P-201ENST00000607443 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
RNU4-89P-201ENST00000607443 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.4
RNU4-89P-201ENST00000607443 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
RNU4-89P-201ENST00000607443 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
RNU4-89P-201ENST00000607443 GSE1Q14687 1217 aa12.57□□□□□ -0.4
RNU4-89P-201ENST00000607443 EMP3P54852 163 aa12.54□□□□□ -0.4
RNU4-89P-201ENST00000607443 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
RNU4-89P-201ENST00000607443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.4
RNU4-89P-201ENST00000607443 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
RNU4-89P-201ENST00000607443 PSEN1P49768 467 aa12.5□□□□□ -0.41
RNU4-89P-201ENST00000607443 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
RNU4-89P-201ENST00000607443 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
RNU4-89P-201ENST00000607443 HS3ST6Q96QI5 342 aa12.48□□□□□ -0.41
RNU4-89P-201ENST00000607443 ILDR1Q86SU0 546 aaPredicted RBP12.47□□□□□ -0.41
RNU4-89P-201ENST00000607443 KRTAP3-3Q9BYR6 98 aa12.47□□□□□ -0.41
RNU4-89P-201ENST00000607443 KRTAP3-2Q9BYR7 98 aa12.47□□□□□ -0.41
RNU4-89P-201ENST00000607443 FAM205CA6NFA0 338 aa12.46□□□□□ -0.41
RNU4-89P-201ENST00000607443 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
RNU4-89P-201ENST00000607443 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
RNU4-89P-201ENST00000607443 PDAP1Q13442 181 aaKnown RBP12.4□□□□□ -0.42
RNU4-89P-201ENST00000607443 BOLA1Q9Y3E2 137 aa12.35□□□□□ -0.43
RNU4-89P-201ENST00000607443 HOXB3P14651 431 aaPredicted RBP12.34□□□□□ -0.43
RNU4-89P-201ENST00000607443 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
RNU4-89P-201ENST00000607443 G3V3G9 751 aa12.33□□□□□ -0.44
RNU4-89P-201ENST00000607443 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
RNU4-89P-201ENST00000607443 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
RNU4-89P-201ENST00000607443 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
RNU4-89P-201ENST00000607443 SPOCK2Q92563 424 aa12.25□□□□□ -0.45
RNU4-89P-201ENST00000607443 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
RNU4-89P-201ENST00000607443 ERBB3P21860 1342 aa12.23□□□□□ -0.45
RNU4-89P-201ENST00000607443 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
RNU4-89P-201ENST00000607443 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
RNU4-89P-201ENST00000607443 RIMBP2O15034 1052 aa12.15□□□□□ -0.46
RNU4-89P-201ENST00000607443 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
RNU4-89P-201ENST00000607443 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
RNU4-89P-201ENST00000607443 TMEM92Q6UXU6 159 aa12.1□□□□□ -0.47
RNU4-89P-201ENST00000607443 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
RNU4-89P-201ENST00000607443 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
RNU4-89P-201ENST00000607443 ZNF687Q8N1G0 1237 aa12.08□□□□□ -0.48
RNU4-89P-201ENST00000607443 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
RNU4-89P-201ENST00000607443 GPR153Q6NV75 609 aa12.06□□□□□ -0.48
RNU4-89P-201ENST00000607443 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
RNU4-89P-201ENST00000607443 SOX12O15370 315 aa12.02□□□□□ -0.49
RNU4-89P-201ENST00000607443 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
RNU4-89P-201ENST00000607443 PTGER2P43116 358 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms