RNA–Protein interactions for RNA: ENST00000607016.1

NUDT3-201, Transcript of nudix hydrolase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDT3, Length 9,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDT3-201ENST00000607016 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
NUDT3-201ENST00000607016 ZRSR1Q15695 479 aaKnown RBP17.81■□□□□ 0.44
NUDT3-201ENST00000607016 MYH16Q9H6N6 1097 aa17.81■□□□□ 0.44
NUDT3-201ENST00000607016 MSNP26038 577 aaKnown RBP17.8■□□□□ 0.44
NUDT3-201ENST00000607016 SUPT16HQ9Y5B9 1047 aaKnown RBP17.8■□□□□ 0.44
NUDT3-201ENST00000607016 TULP1O00294 542 aaPredicted RBP17.8■□□□□ 0.44
NUDT3-201ENST00000607016 TNNT3P45378 269 aaPredicted RBP17.78■□□□□ 0.44
NUDT3-201ENST00000607016 CHAF1AQ13111 956 aaPredicted RBP17.78■□□□□ 0.44
NUDT3-201ENST00000607016 ARID3CA6NKF2 412 aa17.78■□□□□ 0.44
NUDT3-201ENST00000607016 WDR43Q15061 677 aaKnown RBP eCLIP17.76■□□□□ 0.43
NUDT3-201ENST00000607016 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
NUDT3-201ENST00000607016 SPRYD3Q8NCJ5 442 aa17.72■□□□□ 0.43
NUDT3-201ENST00000607016 RGS3P49796 1198 aa17.7■□□□□ 0.42
NUDT3-201ENST00000607016 VSIG10Q8N0Z9 540 aa17.68■□□□□ 0.42
NUDT3-201ENST00000607016 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
NUDT3-201ENST00000607016 HSP90AB1P08238 724 aaKnown RBP17.65■□□□□ 0.42
NUDT3-201ENST00000607016 P3H3Q8IVL6 736 aa17.65■□□□□ 0.42
NUDT3-201ENST00000607016 GOLGA6L6A8MZA4 724 aa17.65■□□□□ 0.42
NUDT3-201ENST00000607016 B4GALNT3Q6L9W6 998 aa17.64■□□□□ 0.41
NUDT3-201ENST00000607016 RBM19Q9Y4C8 960 aaKnown RBP17.64■□□□□ 0.41
NUDT3-201ENST00000607016 DRC7Q8IY82 874 aa17.63■□□□□ 0.41
NUDT3-201ENST00000607016 GZF1Q9H116 711 aaPredicted RBP17.63■□□□□ 0.41
NUDT3-201ENST00000607016 PNNQ9H307 717 aaKnown RBP17.63■□□□□ 0.41
NUDT3-201ENST00000607016 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
NUDT3-201ENST00000607016 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
NUDT3-201ENST00000607016 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
NUDT3-201ENST00000607016 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
NUDT3-201ENST00000607016 CASC1Q6TDU7 716 aa17.58■□□□□ 0.4
NUDT3-201ENST00000607016 PPP4R2Q9NY27 417 aa17.56■□□□□ 0.4
NUDT3-201ENST00000607016 TIMELESSQ9UNS1 1208 aa17.56■□□□□ 0.4
NUDT3-201ENST00000607016 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.39
NUDT3-201ENST00000607016 NRDCO43847 1150 aa17.51■□□□□ 0.39
NUDT3-201ENST00000607016 CHGAP10645 457 aaKnown RBP17.51■□□□□ 0.39
NUDT3-201ENST00000607016 CCDC180Q9P1Z9 1646 aa17.51■□□□□ 0.39
NUDT3-201ENST00000607016 KDM2AQ9Y2K7 1162 aa17.5■□□□□ 0.39
NUDT3-201ENST00000607016 HSCBQ8IWL3 235 aa17.49■□□□□ 0.39
NUDT3-201ENST00000607016 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
NUDT3-201ENST00000607016 NAP1L2Q9ULW6 460 aaPredicted RBP17.44■□□□□ 0.38
NUDT3-201ENST00000607016 KIAA2012Q0VF49 1180 aa17.43■□□□□ 0.38
NUDT3-201ENST00000607016 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
NUDT3-201ENST00000607016 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
NUDT3-201ENST00000607016 SLKQ9H2G2 1235 aaPredicted RBP17.42■□□□□ 0.38
NUDT3-201ENST00000607016 GOLGA6L4A6NEF3 574 aa17.41■□□□□ 0.38
NUDT3-201ENST00000607016 NOC3LQ8WTT2 800 aaKnown RBP17.41■□□□□ 0.38
NUDT3-201ENST00000607016 CALRP27797 417 aaKnown RBP17.4■□□□□ 0.38
NUDT3-201ENST00000607016 A0A0G2JS52 829 aa17.4■□□□□ 0.38
NUDT3-201ENST00000607016 CHIC2Q9UKJ5 165 aa17.39■□□□□ 0.37
NUDT3-201ENST00000607016 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
NUDT3-201ENST00000607016 FRAT1Q92837 279 aaPredicted RBP17.38■□□□□ 0.37
NUDT3-201ENST00000607016 FBLN2P98095 1184 aa17.38■□□□□ 0.37
NUDT3-201ENST00000607016 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
NUDT3-201ENST00000607016 FGD1P98174 961 aa17.36■□□□□ 0.37
NUDT3-201ENST00000607016 TSHZ2Q9NRE2 1034 aa17.35■□□□□ 0.37
NUDT3-201ENST00000607016 PTMSP20962 102 aa17.35■□□□□ 0.37
NUDT3-201ENST00000607016 GOLGA6L3A6NEY3 463 aa17.35■□□□□ 0.37
NUDT3-201ENST00000607016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.373e-7■■□□□ 13.7
NUDT3-201ENST00000607016 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
NUDT3-201ENST00000607016 NEUROD2Q15784 382 aa17.33■□□□□ 0.37
NUDT3-201ENST00000607016 GOLGA6L1Q8N7Z2 621 aa17.33■□□□□ 0.36
NUDT3-201ENST00000607016 ZNF771Q7L3S4 317 aaPredicted RBP17.33■□□□□ 0.36
NUDT3-201ENST00000607016 PKNOX2Q96KN3 472 aa17.33■□□□□ 0.36
NUDT3-201ENST00000607016 CLSTN1O94985 981 aa17.31■□□□□ 0.36
NUDT3-201ENST00000607016 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.366e-6■□□□□ 8.5
NUDT3-201ENST00000607016 KCNJ4P48050 445 aa17.31■□□□□ 0.36
NUDT3-201ENST00000607016 SETQ01105 290 aaPredicted RBP17.29■□□□□ 0.36
NUDT3-201ENST00000607016 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
NUDT3-201ENST00000607016 PODXL2Q9NZ53 605 aa17.29■□□□□ 0.36
NUDT3-201ENST00000607016 PDE4CQ08493 712 aa17.27■□□□□ 0.36
NUDT3-201ENST00000607016 GBP4Q96PP9 640 aa17.27■□□□□ 0.35
NUDT3-201ENST00000607016 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
NUDT3-201ENST00000607016 APPP05067 770 aa17.22■□□□□ 0.35
NUDT3-201ENST00000607016 IPO9Q96P70 1041 aaKnown RBP17.21■□□□□ 0.35
NUDT3-201ENST00000607016 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.34
NUDT3-201ENST00000607016 FAM13BQ9NYF5 915 aa17.19■□□□□ 0.34
NUDT3-201ENST00000607016 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
NUDT3-201ENST00000607016 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
NUDT3-201ENST00000607016 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
NUDT3-201ENST00000607016 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
NUDT3-201ENST00000607016 GNL2Q13823 731 aaKnown RBP17.15■□□□□ 0.34
NUDT3-201ENST00000607016 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
NUDT3-201ENST00000607016 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
NUDT3-201ENST00000607016 TAF7LQ5H9L4 462 aa17.13■□□□□ 0.33
NUDT3-201ENST00000607016 MCCP23508 829 aa17.13■□□□□ 0.33
NUDT3-201ENST00000607016 SYAP1Q96A49 352 aaPredicted RBP17.13■□□□□ 0.33
NUDT3-201ENST00000607016 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
NUDT3-201ENST00000607016 APBB1O00213 710 aa17.12■□□□□ 0.33
NUDT3-201ENST00000607016 CCAR2Q8N163 923 aaKnown RBP17.11■□□□□ 0.33
NUDT3-201ENST00000607016 FOXD4L5Q5VV16 416 aaPredicted RBP17.1■□□□□ 0.33
NUDT3-201ENST00000607016 FOXD4L4Q8WXT5 416 aaPredicted RBP17.1■□□□□ 0.33
NUDT3-201ENST00000607016 RRP7BPQ9NSQ0 103 aa17.09■□□□□ 0.33
NUDT3-201ENST00000607016 CFAP53Q96M91 514 aa17.09■□□□□ 0.33
NUDT3-201ENST00000607016 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
NUDT3-201ENST00000607016 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.32
NUDT3-201ENST00000607016 GSE1Q14687 1217 aa17.07■□□□□ 0.32
NUDT3-201ENST00000607016 BCL11BQ9C0K0 894 aaPredicted RBP17.07■□□□□ 0.32
NUDT3-201ENST00000607016 CREBRFQ8IUR6 639 aa17.06■□□□□ 0.32
NUDT3-201ENST00000607016 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
NUDT3-201ENST00000607016 CALD1Q05682 793 aaKnown RBP17.05■□□□□ 0.32
NUDT3-201ENST00000607016 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
NUDT3-201ENST00000607016 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms