RNA–Protein interactions for RNA: ENST00000606352.1

RNU6-90P-201, Transcript of RNA, U6 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU6-90P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-90P-201ENST00000606352 PAK3O75914 559 aaPredicted RBP4.75□□□□□ -1.65
RNU6-90P-201ENST00000606352 SLC39A7Q92504 469 aa4.75□□□□□ -1.65
RNU6-90P-201ENST00000606352 MAMSTRQ6ZN01 415 aa4.74□□□□□ -1.65
RNU6-90P-201ENST00000606352 FAM163AQ96GL9 167 aaPredicted RBP4.74□□□□□ -1.65
RNU6-90P-201ENST00000606352 MS4A3Q96HJ5 214 aa4.73□□□□□ -1.65
RNU6-90P-201ENST00000606352 NPM1P06748 294 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU6-90P-201ENST00000606352 POTEFA5A3E0 1075 aa4.71□□□□□ -1.66
RNU6-90P-201ENST00000606352 ATN1P54259 1190 aaPredicted RBP4.7□□□□□ -1.66
RNU6-90P-201ENST00000606352 SCUBE2Q9NQ36 999 aa4.68□□□□□ -1.66
RNU6-90P-201ENST00000606352 SPDYE4A6NLX3 237 aa4.66□□□□□ -1.66
RNU6-90P-201ENST00000606352 CDAN1Q8IWY9 1227 aa4.66□□□□□ -1.66
RNU6-90P-201ENST00000606352 KIF12Q96FN5 646 aa4.65□□□□□ -1.67
RNU6-90P-201ENST00000606352 CCDC61Q9Y6R9 512 aa4.65□□□□□ -1.67
RNU6-90P-201ENST00000606352 BMP2KQ9NSY1 1161 aaPredicted RBP4.64□□□□□ -1.67
RNU6-90P-201ENST00000606352 TRPC6Q9Y210 931 aa4.64□□□□□ -1.67
RNU6-90P-201ENST00000606352 TSPYL2Q9H2G4 693 aaPredicted RBP4.63□□□□□ -1.67
RNU6-90P-201ENST00000606352 COLQQ9Y215 455 aaPredicted RBP4.62□□□□□ -1.67
RNU6-90P-201ENST00000606352 TIE1P35590 1138 aa4.61□□□□□ -1.67
RNU6-90P-201ENST00000606352 CSRNP3Q8WYN3 585 aa4.61□□□□□ -1.67
RNU6-90P-201ENST00000606352 MAP3K13O43283 966 aa4.6□□□□□ -1.67
RNU6-90P-201ENST00000606352 ST18O60284 1047 aa4.59□□□□□ -1.67
RNU6-90P-201ENST00000606352 TTLL13PA6NNM8 815 aa4.58□□□□□ -1.68
RNU6-90P-201ENST00000606352 MMRN1Q13201 1228 aa4.57□□□□□ -1.68
RNU6-90P-201ENST00000606352 SPNS2Q8IVW8 549 aa4.57□□□□□ -1.68
RNU6-90P-201ENST00000606352 SEC24BO95487 1268 aa4.56□□□□□ -1.68
RNU6-90P-201ENST00000606352 IER5LQ5T953 404 aa4.56□□□□□ -1.68
RNU6-90P-201ENST00000606352 PROM2Q8N271 834 aa4.55□□□□□ -1.68
RNU6-90P-201ENST00000606352 SLAIN1Q8ND83 568 aa4.55□□□□□ -1.68
RNU6-90P-201ENST00000606352 RASEFQ8IZ41 740 aa4.54□□□□□ -1.68
RNU6-90P-201ENST00000606352 SGIP1Q9BQI5 828 aa4.53□□□□□ -1.68
RNU6-90P-201ENST00000606352 TRIM35Q9UPQ4 493 aa4.53□□□□□ -1.68
RNU6-90P-201ENST00000606352 IRX5P78411 483 aaPredicted RBP4.49□□□□□ -1.69
RNU6-90P-201ENST00000606352 TMEM121BQ9BXQ6 578 aaPredicted RBP4.49□□□□□ -1.69
RNU6-90P-201ENST00000606352 IFNL1Q8IU54 200 aa4.48□□□□□ -1.69
RNU6-90P-201ENST00000606352 MIER1Q8N108 512 aa4.48□□□□□ -1.69
RNU6-90P-201ENST00000606352 PCDHB13Q9Y5F0 798 aa4.48□□□□□ -1.69
RNU6-90P-201ENST00000606352 SNPHO15079 494 aa4.46□□□□□ -1.7
RNU6-90P-201ENST00000606352 PLCG2P16885 1265 aa4.46□□□□□ -1.7
RNU6-90P-201ENST00000606352 NUBP1P53384 320 aa4.46□□□□□ -1.7
RNU6-90P-201ENST00000606352 MARVELD3Q96A59 401 aa4.46□□□□□ -1.7
RNU6-90P-201ENST00000606352 TMEM106CQ9BVX2 250 aa4.46□□□□□ -1.7
RNU6-90P-201ENST00000606352 POTEB3A0JP26 581 aa4.45□□□□□ -1.7
RNU6-90P-201ENST00000606352 POTEBQ6S5H4 581 aa4.45□□□□□ -1.7
RNU6-90P-201ENST00000606352 OCEL1Q9H607 264 aa4.45□□□□□ -1.7
RNU6-90P-201ENST00000606352 PLEKHG5O94827 1062 aa4.44□□□□□ -1.7
RNU6-90P-201ENST00000606352 KRTAP3-3Q9BYR6 98 aa4.44□□□□□ -1.7
RNU6-90P-201ENST00000606352 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
RNU6-90P-201ENST00000606352 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.42□□□□□ -1.7
RNU6-90P-201ENST00000606352 HS3ST6Q96QI5 342 aa4.39□□□□□ -1.71
RNU6-90P-201ENST00000606352 FAM205CA6NFA0 338 aa4.38□□□□□ -1.71
RNU6-90P-201ENST00000606352 EMP3P54852 163 aa4.38□□□□□ -1.71
RNU6-90P-201ENST00000606352 PLCD3Q8N3E9 789 aa4.38□□□□□ -1.71
RNU6-90P-201ENST00000606352 PDCD7Q8N8D1 485 aaKnown RBP4.38□□□□□ -1.71
RNU6-90P-201ENST00000606352 FAM212AQ96EL1 285 aa4.36□□□□□ -1.71
RNU6-90P-201ENST00000606352 ZBTB47Q9UFB7 747 aaPredicted RBP4.36□□□□□ -1.71
RNU6-90P-201ENST00000606352 L3MBTL3Q96JM7 780 aaPredicted RBP4.35□□□□□ -1.71
RNU6-90P-201ENST00000606352 PCDHB8Q9UN66 801 aa4.35□□□□□ -1.71
RNU6-90P-201ENST00000606352 PYGBP11216 843 aa4.34□□□□□ -1.71
RNU6-90P-201ENST00000606352 DCAF8Q5TAQ9 597 aa4.33□□□□□ -1.72
RNU6-90P-201ENST00000606352 HOXB3P14651 431 aaPredicted RBP4.32□□□□□ -1.72
RNU6-90P-201ENST00000606352 C3orf67Q6ZVT6 689 aa4.32□□□□□ -1.72
RNU6-90P-201ENST00000606352 ILDR1Q86SU0 546 aaPredicted RBP4.32□□□□□ -1.72
RNU6-90P-201ENST00000606352 EHMT2Q96KQ7 1210 aa4.32□□□□□ -1.72
RNU6-90P-201ENST00000606352 HOXB1P14653 301 aaPredicted RBP4.3□□□□□ -1.72
RNU6-90P-201ENST00000606352 MKRN3Q13064 507 aaKnown RBP4.29□□□□□ -1.72
RNU6-90P-201ENST00000606352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.29□□□□□ -1.72
RNU6-90P-201ENST00000606352 DPY19L2Q6NUT2 758 aa4.28□□□□□ -1.72
RNU6-90P-201ENST00000606352 RNF166Q96A37 237 aaPredicted RBP4.28□□□□□ -1.72
RNU6-90P-201ENST00000606352 ERBB3P21860 1342 aa4.26□□□□□ -1.73
RNU6-90P-201ENST00000606352 CHRM1P11229 460 aaPredicted RBP4.26□□□□□ -1.73
RNU6-90P-201ENST00000606352 ZNF467Q7Z7K2 595 aaPredicted RBP4.26□□□□□ -1.73
RNU6-90P-201ENST00000606352 PSEN1P49768 467 aa4.25□□□□□ -1.73
RNU6-90P-201ENST00000606352 GOLGA2Q08379 1002 aa4.25□□□□□ -1.73
RNU6-90P-201ENST00000606352 MYT1LQ9UL68 1186 aa4.25□□□□□ -1.73
RNU6-90P-201ENST00000606352 BOLA1Q9Y3E2 137 aa4.24□□□□□ -1.73
RNU6-90P-201ENST00000606352 DOK7Q18PE1 504 aa4.23□□□□□ -1.73
RNU6-90P-201ENST00000606352 ZNF687Q8N1G0 1237 aa4.23□□□□□ -1.73
RNU6-90P-201ENST00000606352 ZNF710Q8N1W2 664 aa4.23□□□□□ -1.73
RNU6-90P-201ENST00000606352 GSE1Q14687 1217 aa4.22□□□□□ -1.73
RNU6-90P-201ENST00000606352 VARS2Q5ST30 1063 aaKnown RBP4.22□□□□□ -1.73
RNU6-90P-201ENST00000606352 GPR153Q6NV75 609 aa4.2□□□□□ -1.74
RNU6-90P-201ENST00000606352 PTGER2P43116 358 aa4.19□□□□□ -1.74
RNU6-90P-201ENST00000606352 PDAP1Q13442 181 aaKnown RBP4.19□□□□□ -1.74
RNU6-90P-201ENST00000606352 ZSWIM6Q9HCJ5 1215 aa4.19□□□□□ -1.74
RNU6-90P-201ENST00000606352 G3V3G9 751 aa4.18□□□□□ -1.74
RNU6-90P-201ENST00000606352 TMEM92Q6UXU6 159 aa4.18□□□□□ -1.74
RNU6-90P-201ENST00000606352 CABP2Q9NPB3 220 aa4.18□□□□□ -1.74
RNU6-90P-201ENST00000606352 RIMBP2O15034 1052 aa4.17□□□□□ -1.74
RNU6-90P-201ENST00000606352 ANKRD13DQ6ZTN6 518 aa4.16□□□□□ -1.74
RNU6-90P-201ENST00000606352 FKBP8Q14318 412 aa4.14□□□□□ -1.75
RNU6-90P-201ENST00000606352 KLHL34Q8N239 644 aa4.14□□□□□ -1.75
RNU6-90P-201ENST00000606352 FBXO3Q9UK99 471 aa4.14□□□□□ -1.75
RNU6-90P-201ENST00000606352 ZNF316A6NFI3 1004 aaPredicted RBP4.13□□□□□ -1.75
RNU6-90P-201ENST00000606352 ARSIQ5FYB1 569 aa4.13□□□□□ -1.75
RNU6-90P-201ENST00000606352 MICALL2Q8IY33 904 aa4.13□□□□□ -1.75
RNU6-90P-201ENST00000606352 PLA2G2EQ9NZK7 142 aa4.13□□□□□ -1.75
RNU6-90P-201ENST00000606352 LSM11P83369 360 aaKnown RBP eCLIP4.12□□□□□ -1.75
RNU6-90P-201ENST00000606352 EFCAB3Q8N7B9 438 aa4.12□□□□□ -1.75
RNU6-90P-201ENST00000606352 POTEEQ6S8J3 1075 aa4.11□□□□□ -1.75
RNU6-90P-201ENST00000606352 KHSRPQ92945 711 aaKnown RBP eCLIP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms